RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 PSD3Q9NYI0 1048 aa7.4□□□□□ -1.23
USP1-202ENST00000371146 RWDD2AQ9UIY3 292 aa7.4□□□□□ -1.23
USP1-202ENST00000371146 GUCA1BQ9UMX6 200 aa7.4□□□□□ -1.23
USP1-202ENST00000371146 WNT6Q9Y6F9 365 aa7.4□□□□□ -1.23
USP1-202ENST00000371146 SOD2P04179 222 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 SMAD3P84022 425 aaKnown RBP7.39□□□□□ -1.23
USP1-202ENST00000371146 GHRHRQ02643 423 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 TNK2Q07912 1038 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 PPP1R26Q5T8A7 1209 aaPredicted RBP7.39□□□□□ -1.23
USP1-202ENST00000371146 ACBD5Q5T8D3 534 aaPredicted RBP7.39□□□□□ -1.23
USP1-202ENST00000371146 SFMBT2Q5VUG0 894 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 B4GALNT4Q76KP1 1039 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 TFAP2DQ7Z6R9 452 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 SLC47A2Q86VL8 602 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 SLC39A11Q8N1S5 342 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 CFAP52Q8N1V2 620 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 B3GALNT2Q8NCR0 500 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 CSGALNACT1Q8TDX6 532 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 LRRN4Q8WUT4 740 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 BAG1Q99933 345 aaPredicted RBP7.39□□□□□ -1.23
USP1-202ENST00000371146 CALN1Q9BXU9 219 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.39□□□□□ -1.23
USP1-202ENST00000371146 TCHHQ07283 1943 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 UBE4BO95155 1302 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 ARAP2Q8WZ64 1704 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 WDR27A2RRH5 827 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 SPOPO43791 374 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 IVLP07476 585 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 YWHAEP62258 255 aaKnown RBP7.39□□□□□ -1.23
USP1-202ENST00000371146 KDSRQ06136 332 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 MGAT3Q09327 533 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 ARHGAP29Q52LW3 1261 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 PRR23BQ6ZRT6 265 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 ARID3BQ8IVW6 561 aaPredicted RBP7.39□□□□□ -1.23
USP1-202ENST00000371146 COLGALT2Q8IYK4 626 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 SLC43A3Q8NBI5 491 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 GIMAP7Q8NHV1 300 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 ITFG1Q8TB96 612 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 PLEKHO2Q8TD55 490 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 SELENOOQ9BVL4 669 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 YIPF2Q9BWQ6 316 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 ULBP1Q9BZM6 244 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 GOLPH3Q9H4A6 298 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 TMEM8AQ9HCN3 771 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 DDIT4Q9NX09 232 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 GTSE1Q9NYZ3 720 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 ADAM22Q9P0K1 906 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 FAM8A1Q9UBU6 413 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 MUTYHQ9UIF7 546 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 STRIP2Q9ULQ0 834 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 TPX2Q9ULW0 747 aaKnown RBP7.39□□□□□ -1.23
USP1-202ENST00000371146 NEMP1O14524 444 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 EIF3DO15371 548 aaKnown RBP eCLIP7.39□□□□□ -1.233e-12■■□□□ 13.3
USP1-202ENST00000371146 GNA14O95837 355 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 RHOP08100 348 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 FSHRP23945 695 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 YWHAQP27348 245 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 SFSWAPQ12872 951 aaKnown RBP7.39□□□□□ -1.23
USP1-202ENST00000371146 CUL2Q13617 745 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 AAK1Q2M2I8 961 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 SOWAHAQ2M3V2 549 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 SYCP2LQ5T4T6 812 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 CFAP58Q5T655 872 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 DAB2IPQ5VWQ8 1189 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 FAM131BQ86XD5 332 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 WDR49Q8IV35 697 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 TRIM42Q8IWZ5 723 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 CMTR2Q8IYT2 770 aaKnown RBP7.39□□□□□ -1.23
USP1-202ENST00000371146 OR10T2Q8NGX3 314 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 PHOSPHO2Q8TCD6 241 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 HDAC7Q8WUI4 952 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 HSPH1Q92598 858 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 TWNKQ96RR1 684 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 LMCD1Q9NZU5 365 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 CD207Q9UJ71 328 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 FAM50BQ9Y247 325 aa7.39□□□□□ -1.23
USP1-202ENST00000371146 USP15Q9Y4E8 981 aaPredicted RBP7.39□□□□□ -1.23
USP1-202ENST00000371146 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.39□□□□□ -1.23
USP1-202ENST00000371146 MAST2Q6P0Q8 1798 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 KIAA1217Q5T5P2 1943 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 A8MX80 341 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 MAP3K13O43283 966 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 RTN2O75298 545 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 HOXD13P35453 343 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 PNPLA4P41247 253 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 TUFMP49411 452 aaKnown RBP7.38□□□□□ -1.23
USP1-202ENST00000371146 SMTNL2Q2TAL5 461 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 PIGZQ86VD9 579 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 LRRTM3Q86VH5 581 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 OSTM1Q86WC4 334 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 CHSY1Q86X52 802 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 RNF135Q8IUD6 432 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 GJD3Q8N144 294 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.38□□□□□ -1.23
USP1-202ENST00000371146 MRPL38Q96DV4 380 aaKnown RBP7.38□□□□□ -1.23
USP1-202ENST00000371146 RIPOR3Q96MK2 946 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 KLHL5Q96PQ7 755 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 DUSP9Q99956 384 aaKnown RBP7.38□□□□□ -1.23
USP1-202ENST00000371146 SEZ6LQ9BYH1 1024 aa7.38□□□□□ -1.23
USP1-202ENST00000371146 MIR1-1HGQ9H1L0 117 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms