RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 ZNF556Q9HAH1 456 aa17.73■□□□□ 0.43
PTP4A1-201ENST00000370651 OGTO15294 1046 aa17.73■□□□□ 0.43
PTP4A1-201ENST00000370651 MAGEB2O15479 319 aa17.73■□□□□ 0.43
PTP4A1-201ENST00000370651 LSM8O95777 96 aaKnown RBP17.73■□□□□ 0.43
PTP4A1-201ENST00000370651 CD4P01730 458 aa17.73■□□□□ 0.43
PTP4A1-201ENST00000370651 CNGA2Q16280 664 aa17.73■□□□□ 0.43
PTP4A1-201ENST00000370651 APOBEC3FQ8IUX4 373 aaKnown RBP17.73■□□□□ 0.43
PTP4A1-201ENST00000370651 APOPT1Q96IL0 206 aa17.73■□□□□ 0.43
PTP4A1-201ENST00000370651 ZNF184Q99676 751 aaPredicted RBP17.73■□□□□ 0.43
PTP4A1-201ENST00000370651 RARBP10826 455 aa17.73■□□□□ 0.43
PTP4A1-201ENST00000370651 SSTR1P30872 391 aa17.73■□□□□ 0.43
PTP4A1-201ENST00000370651 ELK3P41970 407 aa17.73■□□□□ 0.43
PTP4A1-201ENST00000370651 C1QBPQ07021 282 aaKnown RBP17.73■□□□□ 0.43
PTP4A1-201ENST00000370651 TTC23LQ6PF05 361 aa17.73■□□□□ 0.43
PTP4A1-201ENST00000370651 GDPD5Q8WTR4 605 aa17.73■□□□□ 0.43
PTP4A1-201ENST00000370651 FAM151AQ8WW52 585 aa17.73■□□□□ 0.43
PTP4A1-201ENST00000370651 TUBGCP3Q96CW5 907 aa17.73■□□□□ 0.43
PTP4A1-201ENST00000370651 MTMR12Q9C0I1 747 aa17.73■□□□□ 0.43
PTP4A1-201ENST00000370651 PEX5P50542 639 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 CASP7P55210 303 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 SWT1Q5T5J6 900 aaKnown RBP17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 ABRAQ8N0Z2 381 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 KYQ8NBH2 561 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 SH3TC2Q8TF17 1288 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 GPRASP2Q96D09 838 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 CCDC126Q96EE4 140 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 TRIM45Q9H8W5 580 aaPredicted RBP17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.72■□□□□ 0.437e-26■□□□□ 11.2
PTP4A1-201ENST00000370651 USP18Q9UMW8 372 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 CLASP2O75122 1294 aaKnown RBP17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 DEPDC1Q5TB30 811 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 MFN1Q8IWA4 741 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 TNIP2Q8NFZ5 429 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 NUDT12Q9BQG2 462 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 KCTD10Q9H3F6 313 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 LATS2Q9NRM7 1088 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 PIM2Q9P1W9 311 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 APPL1Q9UKG1 709 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 RUVBL2Q9Y230 463 aaKnown RBP17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 ABCA9Q8IUA7 1624 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 C1orf167Q5SNV9 1468 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 ANXA9O76027 345 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 HIST1H2AGP0C0S8 130 aaPredicted RBP17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 HIST1H2ADP20671 130 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 GLRBP48167 497 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 ARHGAP22Q7Z5H3 698 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 PAWRQ96IZ0 340 aaKnown RBP17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 MPP4Q96JB8 637 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 HIST1H2AHQ96KK5 128 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 HIST1H2AJQ99878 128 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 CNPY3Q9BT09 278 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 H2AFJQ9BTM1 129 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 ARMCX1Q9P291 453 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 CDC25CP30307 473 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 GRIK1P39086 918 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 CDK16Q00536 496 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 CGRRF1Q99675 332 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 FAM192AQ9GZU8 254 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 CATSPERBQ9H7T0 1116 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 SLC30A1Q9Y6M5 507 aa17.72■□□□□ 0.43
PTP4A1-201ENST00000370651 KANSL1LA0AUZ9 987 aa17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 SHBGP04278 402 aa17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 AVPR1AP37288 418 aa17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 RRP1BQ14684 758 aaKnown RBP17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 DCAF4L1Q3SXM0 396 aa17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 HORMAD1Q86X24 394 aa17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 ARHGEF19Q8IW93 802 aa17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 GPATCH2LQ9NWQ4 482 aa17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 ADGRB1O14514 1584 aa17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 UNC5CO95185 931 aa17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 ADRA1DP25100 572 aa17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 PRKCIP41743 596 aa17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 TERB1Q8NA31 727 aa17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 CATSPER2Q96P56 530 aa17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 MMADHCQ9H3L0 296 aaPredicted RBP17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 PKP3Q9Y446 797 aa17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 TNPO2O14787 897 aaKnown RBP17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 UBE3AQ05086 875 aa17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 ORC1Q13415 861 aa17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 AUHQ13825 339 aaKnown RBP17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 LPCAT2Q7L5N7 544 aa17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 STRA8Q7Z7C7 330 aa17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 SPATA2LQ8IUW3 424 aaPredicted RBP17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 EMC1Q8N766 993 aa17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 B4GALNT2Q8NHY0 566 aa17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 SRPK1Q96SB4 655 aaKnown RBP17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 TMEM161AQ9NX61 479 aa17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 ZNF70Q9UC06 446 aaPredicted RBP17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 VDRP11473 427 aa17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 DRD4P21917 467 aa17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 CDC42EP1Q00587 391 aa17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 SLC45A4Q5BKX6 768 aa17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 TDRD5Q8NAT2 981 aaKnown RBP17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 TCF7L2Q9NQB0 619 aa17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 ADGRB2O60241 1585 aa17.71■□□□□ 0.43
PTP4A1-201ENST00000370651 KCNJ2P63252 427 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 ITPK1Q13572 414 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 MIIPQ5JXC2 388 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 UNC45BQ8IWX7 931 aa17.7■□□□□ 0.42
PTP4A1-201ENST00000370651 FAM172AQ8WUF8 416 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms