RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 PALMO75781 387 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 VNN2O95498 520 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 CYP2F1P24903 491 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 DNAJB2P25686 324 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 BCAT1P54687 386 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 PLCB3Q01970 1234 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 C1QBPQ07021 282 aaKnown RBP12.87□□□□□ -0.35
CAPN9-203ENST00000366666 BST2Q10589 180 aaKnown RBP12.87□□□□□ -0.35
CAPN9-203ENST00000366666 MAMLD1Q13495 774 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 STILQ15468 1287 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 DAB2IPQ5VWQ8 1189 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 PIGZQ86VD9 579 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 XYLT1Q86Y38 959 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 TPCN2Q8NHX9 752 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 SPATA18Q8TC71 538 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 CLP1Q92989 425 aaKnown RBP12.87□□□□□ -0.35
CAPN9-203ENST00000366666 TMEM169Q96HH4 297 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 RNPC3Q96LT9 517 aaKnown RBP12.87□□□□□ -0.35
CAPN9-203ENST00000366666 CRISPLD1Q9H336 500 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 SPG21Q9NZD8 308 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 BCCIPQ9P287 314 aaKnown RBP eCLIP12.87□□□□□ -0.35
CAPN9-203ENST00000366666 MTUS1Q9ULD2 1270 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 PACSIN2Q9UNF0 486 aaPredicted RBP12.87□□□□□ -0.35
CAPN9-203ENST00000366666 SAR1BQ9Y6B6 198 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 ATP8B3O60423 1300 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 PDE4DIPQ5VU43 2346 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 TRIM66O15016 1216 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 BUB1BO60566 1050 aaPredicted RBP12.87□□□□□ -0.35
CAPN9-203ENST00000366666 AP1G2O75843 785 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 FGF18O76093 207 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 FTCDO95954 541 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 NPR3P17342 541 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 NDUFV1P49821 464 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 TSPY1Q01534 308 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 TAF5Q15542 800 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 USP41Q3LFD5 358 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 SWT1Q5T5J6 900 aaKnown RBP12.87□□□□□ -0.35
CAPN9-203ENST00000366666 PLEKHA7Q6IQ23 1121 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 SUGP1Q8IWZ8 645 aaKnown RBP12.87□□□□□ -0.35
CAPN9-203ENST00000366666 KLHL23Q8NBE8 558 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 ATAD1Q8NBU5 361 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 PHOSPHO2Q8TCD6 241 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 C18orf8Q96DM3 657 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 C17orf80Q9BSJ5 609 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 SLC4A5Q9BY07 1137 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 CDY1Q9Y6F8 540 aa12.87□□□□□ -0.35
CAPN9-203ENST00000366666 A0A0A6YYK5 440 aaPredicted RBP12.86□□□□□ -0.35
CAPN9-203ENST00000366666 LINC01553A4QN01 128 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 NCK2O43639 380 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 SOAT2O75908 522 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 SOD2P04179 222 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 FAM200BP0CF97 657 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 LCP1P13796 627 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 PBX2P40425 430 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 GPR15P49685 360 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 ELAVL2Q12926 359 aaKnown RBP12.86□□□□□ -0.35
CAPN9-203ENST00000366666 TTC31Q49AM3 519 aaPredicted RBP12.86□□□□□ -0.35
CAPN9-203ENST00000366666 ZNF280DQ6N043 979 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 RNF19BQ6ZMZ0 732 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 FAM183BPQ6ZVS7 135 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 VPS52Q8N1B4 723 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 LRRC57Q8N9N7 239 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 JOSD2Q8TAC2 188 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 ZNF564Q8TBZ8 553 aaPredicted RBP12.86□□□□□ -0.35
CAPN9-203ENST00000366666 VCPIP1Q96JH7 1222 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 NOX5Q96PH1 765 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 MIS12Q9H081 205 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 ALG13Q9NP73 1137 aaKnown RBP12.86□□□□□ -0.35
CAPN9-203ENST00000366666 ABI2Q9NYB9 513 aaPredicted RBP12.86□□□□□ -0.35
CAPN9-203ENST00000366666 LCMT1Q9UIC8 334 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 PCDHGC5Q9Y5F6 944 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 NR2E3Q9Y5X4 410 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 SZT2Q5T011 3432 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 GREB1Q4ZG55 1949 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 ZNF638Q14966 1978 aaKnown RBP12.86□□□□□ -0.35
CAPN9-203ENST00000366666 ARHGEF37A1IGU5 675 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 TMEM110-MUSTN1A8MSY1 372 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 HHLA1C9JL84 531 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 H0YGN5 161 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 PAPSS1O43252 624 aaPredicted RBP12.86□□□□□ -0.35
CAPN9-203ENST00000366666 GRAP2O75791 330 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 GABRB2P47870 512 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 OGDHQ02218 1023 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 PPP1R15BQ5SWA1 713 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 SDHAF4Q5VUM1 108 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 TRNP1Q6NT89 227 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 RNF10Q8N5U6 811 aaKnown RBP12.86□□□□□ -0.35
CAPN9-203ENST00000366666 EMC1Q8N766 993 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 FBXO22Q8NEZ5 403 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 CLSTN3Q9BQT9 956 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 SYNCQ9H7C4 482 aa12.86□□□□□ -0.35
CAPN9-203ENST00000366666 WDR27A2RRH5 827 aa12.85□□□□□ -0.35
CAPN9-203ENST00000366666 F8VP50 259 aa12.85□□□□□ -0.35
CAPN9-203ENST00000366666 XPO1O14980 1071 aaKnown RBP12.85□□□□□ -0.35
CAPN9-203ENST00000366666 ATP1A1P05023 1023 aaKnown RBP12.85□□□□□ -0.35
CAPN9-203ENST00000366666 CALB1P05937 261 aa12.85□□□□□ -0.35
CAPN9-203ENST00000366666 CA3P07451 260 aa12.85□□□□□ -0.35
CAPN9-203ENST00000366666 CPB1P15086 417 aa12.85□□□□□ -0.35
CAPN9-203ENST00000366666 DNAJB1P25685 340 aa12.85□□□□□ -0.35
CAPN9-203ENST00000366666 OR1D2P34982 312 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms