RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 HOXC13P31276 330 aa14.53□□□□□ -0.08
TNFRSF1A-202ENST00000366159 PDE6CP51160 858 aa14.53□□□□□ -0.08
TNFRSF1A-202ENST00000366159 GALK1P51570 392 aa14.53□□□□□ -0.08
TNFRSF1A-202ENST00000366159 DMWDQ09019 674 aa14.53□□□□□ -0.08
TNFRSF1A-202ENST00000366159 TAF10Q12962 218 aa14.53□□□□□ -0.08
TNFRSF1A-202ENST00000366159 ADAM9Q13443 819 aa14.53□□□□□ -0.08
TNFRSF1A-202ENST00000366159 EDRF1Q3B7T1 1238 aa14.53□□□□□ -0.08
TNFRSF1A-202ENST00000366159 COBLL1Q53SF7 1204 aa14.53□□□□□ -0.08
TNFRSF1A-202ENST00000366159 SPOPLQ6IQ16 392 aa14.53□□□□□ -0.08
TNFRSF1A-202ENST00000366159 CC2D1AQ6P1N0 951 aaPredicted RBP14.53□□□□□ -0.08
TNFRSF1A-202ENST00000366159 PKN3Q6P5Z2 889 aa14.53□□□□□ -0.08
TNFRSF1A-202ENST00000366159 FAM35AQ86V20 835 aa14.53□□□□□ -0.08
TNFRSF1A-202ENST00000366159 UNC93AQ86WB7 457 aa14.53□□□□□ -0.08
TNFRSF1A-202ENST00000366159 NUP93Q8N1F7 819 aa14.53□□□□□ -0.08
TNFRSF1A-202ENST00000366159 DCLK2Q8N568 766 aa14.53□□□□□ -0.08
TNFRSF1A-202ENST00000366159 ZMIZ2Q8NF64 920 aa14.53□□□□□ -0.08
TNFRSF1A-202ENST00000366159 OVCA2Q8WZ82 227 aa14.53□□□□□ -0.08
TNFRSF1A-202ENST00000366159 EZH1Q92800 747 aaPredicted RBP14.53□□□□□ -0.08
TNFRSF1A-202ENST00000366159 TNIP3Q96KP6 325 aa14.53□□□□□ -0.08
TNFRSF1A-202ENST00000366159 LINC00597Q9H2U6 94 aa14.53□□□□□ -0.08
TNFRSF1A-202ENST00000366159 APOBEC3GQ9HC16 384 aaKnown RBP14.53□□□□□ -0.08
TNFRSF1A-202ENST00000366159 CSNK1G1Q9HCP0 422 aa14.53□□□□□ -0.08
TNFRSF1A-202ENST00000366159 DUS2Q9NX74 493 aaKnown RBP14.53□□□□□ -0.08
TNFRSF1A-202ENST00000366159 HMGXB4Q9UGU5 601 aa14.53□□□□□ -0.08
TNFRSF1A-202ENST00000366159 WNT6Q9Y6F9 365 aa14.53□□□□□ -0.08
TNFRSF1A-202ENST00000366159 LEFTY2O00292 366 aa14.52□□□□□ -0.08
TNFRSF1A-202ENST00000366159 ZDHHC11BP0C7U3 371 aa14.52□□□□□ -0.08
TNFRSF1A-202ENST00000366159 TRIM49P0CI25 452 aa14.52□□□□□ -0.08
TNFRSF1A-202ENST00000366159 TRIM49CP0CI26 452 aa14.52□□□□□ -0.08
TNFRSF1A-202ENST00000366159 P4HA1P13674 534 aa14.52□□□□□ -0.08
TNFRSF1A-202ENST00000366159 RPL13P26373 211 aaKnown RBP14.52□□□□□ -0.08
TNFRSF1A-202ENST00000366159 PSMC2P35998 433 aaKnown RBP14.52□□□□□ -0.08
TNFRSF1A-202ENST00000366159 NDST1P52848 882 aa14.52□□□□□ -0.08
TNFRSF1A-202ENST00000366159 INCA1Q0VD86 236 aa14.52□□□□□ -0.08
TNFRSF1A-202ENST00000366159 GAB4Q2WGN9 574 aa14.52□□□□□ -0.08
TNFRSF1A-202ENST00000366159 NAIF1Q69YI7 327 aaPredicted RBP14.52□□□□□ -0.08
TNFRSF1A-202ENST00000366159 SCARA5Q6ZMJ2 495 aa14.52□□□□□ -0.08
TNFRSF1A-202ENST00000366159 ACOT1Q86TX2 421 aa14.52□□□□□ -0.08
TNFRSF1A-202ENST00000366159 FAM186BQ8IYM0 893 aa14.52□□□□□ -0.08
TNFRSF1A-202ENST00000366159 SMYD4Q8IYR2 804 aaPredicted RBP14.52□□□□□ -0.08
TNFRSF1A-202ENST00000366159 SCAMP5Q8TAC9 235 aa14.52□□□□□ -0.08
TNFRSF1A-202ENST00000366159 TAS1R2Q8TE23 839 aa14.52□□□□□ -0.08
TNFRSF1A-202ENST00000366159 ATP2A3Q93084 1043 aa14.52□□□□□ -0.08
TNFRSF1A-202ENST00000366159 SMOQ99835 787 aa14.52□□□□□ -0.08
TNFRSF1A-202ENST00000366159 CHURC1-FNTBB4DL54 471 aa14.51□□□□□ -0.09
TNFRSF1A-202ENST00000366159 HRO43593 1189 aa14.51□□□□□ -0.09
TNFRSF1A-202ENST00000366159 BEST1O76090 585 aa14.51□□□□□ -0.09
TNFRSF1A-202ENST00000366159 RTN3O95197 1032 aaPredicted RBP14.51□□□□□ -0.09
TNFRSF1A-202ENST00000366159 EGFP01133 1207 aa14.51□□□□□ -0.09
TNFRSF1A-202ENST00000366159 TGM1P22735 817 aa14.51□□□□□ -0.09
TNFRSF1A-202ENST00000366159 YWHAQP27348 245 aa14.51□□□□□ -0.09
TNFRSF1A-202ENST00000366159 GCLMP48507 274 aa14.51□□□□□ -0.09
TNFRSF1A-202ENST00000366159 AMPD2Q01433 879 aa14.51□□□□□ -0.09
TNFRSF1A-202ENST00000366159 GRSF1Q12849 480 aaKnown RBP eCLIP14.51□□□□□ -0.09
TNFRSF1A-202ENST00000366159 PNOCQ13519 176 aa14.51□□□□□ -0.09
TNFRSF1A-202ENST00000366159 ZC3H3Q8IXZ2 948 aaKnown RBP14.51□□□□□ -0.09
TNFRSF1A-202ENST00000366159 ADGRG2Q8IZP9 1017 aa14.51□□□□□ -0.09
TNFRSF1A-202ENST00000366159 CPA6Q8N4T0 437 aa14.51□□□□□ -0.09
TNFRSF1A-202ENST00000366159 WHAMMQ8TF30 809 aa14.51□□□□□ -0.09
TNFRSF1A-202ENST00000366159 SMARCD1Q96GM5 515 aa14.51□□□□□ -0.09
TNFRSF1A-202ENST00000366159 ZFRQ96KR1 1074 aaKnown RBP14.51□□□□□ -0.09
TNFRSF1A-202ENST00000366159 SLITRK1Q96PX8 696 aa14.51□□□□□ -0.09
TNFRSF1A-202ENST00000366159 GSDMAQ96QA5 445 aa14.51□□□□□ -0.09
TNFRSF1A-202ENST00000366159 TWNKQ96RR1 684 aa14.51□□□□□ -0.09
TNFRSF1A-202ENST00000366159 COMMD8Q9NX08 183 aa14.51□□□□□ -0.09
TNFRSF1A-202ENST00000366159 SMG5Q9UPR3 1016 aaKnown RBP14.51□□□□□ -0.09
TNFRSF1A-202ENST00000366159 CACNA1AO00555 2505 aa14.51□□□□□ -0.09
TNFRSF1A-202ENST00000366159 DRD1P21728 446 aa14.5□□□□□ -0.09
TNFRSF1A-202ENST00000366159 GTF2H1P32780 548 aa14.5□□□□□ -0.09
TNFRSF1A-202ENST00000366159 PRCPP42785 496 aa14.5□□□□□ -0.09
TNFRSF1A-202ENST00000366159 IFNAR2P48551 515 aa14.5□□□□□ -0.09
TNFRSF1A-202ENST00000366159 SLC5A3P53794 718 aa14.5□□□□□ -0.09
TNFRSF1A-202ENST00000366159 NUCB2P80303 420 aa14.5□□□□□ -0.09
TNFRSF1A-202ENST00000366159 BECN1Q14457 450 aa14.5□□□□□ -0.09
TNFRSF1A-202ENST00000366159 LONP2Q86WA8 852 aa14.5□□□□□ -0.09
TNFRSF1A-202ENST00000366159 KIAA2013Q8IYS2 634 aa14.5□□□□□ -0.09
TNFRSF1A-202ENST00000366159 C12orf29Q8N999 325 aa14.5□□□□□ -0.09
TNFRSF1A-202ENST00000366159 PDZD8Q8NEN9 1154 aa14.5□□□□□ -0.09
TNFRSF1A-202ENST00000366159 SLC2A14Q8TDB8 520 aa14.5□□□□□ -0.09
TNFRSF1A-202ENST00000366159 DUSP9Q99956 384 aaKnown RBP14.5□□□□□ -0.09
TNFRSF1A-202ENST00000366159 P2RY13Q9BPV8 354 aa14.5□□□□□ -0.09
TNFRSF1A-202ENST00000366159 CYP3A43Q9HB55 503 aa14.5□□□□□ -0.09
TNFRSF1A-202ENST00000366159 TMEM8AQ9HCN3 771 aa14.5□□□□□ -0.09
TNFRSF1A-202ENST00000366159 DMAP1Q9NPF5 467 aaPredicted RBP14.5□□□□□ -0.09
TNFRSF1A-202ENST00000366159 CPQQ9Y646 472 aa14.5□□□□□ -0.09
TNFRSF1A-202ENST00000366159 KIAA1549LQ6ZVL6 1849 aa14.49□□□□□ -0.09
TNFRSF1A-202ENST00000366159 HHLA1C9JL84 531 aa14.49□□□□□ -0.09
TNFRSF1A-202ENST00000366159 COCHO43405 550 aa14.49□□□□□ -0.09
TNFRSF1A-202ENST00000366159 AP1G2O75843 785 aa14.49□□□□□ -0.09
TNFRSF1A-202ENST00000366159 KRT13P13646 458 aa14.49□□□□□ -0.09
TNFRSF1A-202ENST00000366159 CCDC130P13994 396 aa14.49□□□□□ -0.09
TNFRSF1A-202ENST00000366159 CNR2P34972 360 aa14.49□□□□□ -0.09
TNFRSF1A-202ENST00000366159 OPRD1P41143 372 aa14.49□□□□□ -0.09
TNFRSF1A-202ENST00000366159 PIK3CAP42336 1068 aa14.49□□□□□ -0.09
TNFRSF1A-202ENST00000366159 FNTBP49356 437 aa14.49□□□□□ -0.09
TNFRSF1A-202ENST00000366159 PGFP49763 221 aa14.49□□□□□ -0.09
TNFRSF1A-202ENST00000366159 TUBP50607 506 aa14.49□□□□□ -0.09
TNFRSF1A-202ENST00000366159 ORC1Q13415 861 aa14.49□□□□□ -0.09
TNFRSF1A-202ENST00000366159 FBXO43Q4G163 708 aa14.49□□□□□ -0.09
TNFRSF1A-202ENST00000366159 ZNF658Q5TYW1 1059 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms