RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 VTNP04004 478 aa15□□□□□ -0.01
NIPAL3-203ENST00000358028 GSTA1P08263 222 aa15□□□□□ -0.01
NIPAL3-203ENST00000358028 ITGB8P26012 769 aa15□□□□□ -0.01
NIPAL3-203ENST00000358028 STAT4Q14765 748 aa15□□□□□ -0.01
NIPAL3-203ENST00000358028 KYAT1Q16773 422 aa15□□□□□ -0.01
NIPAL3-203ENST00000358028 FBXW10Q5XX13 1052 aa15□□□□□ -0.01
NIPAL3-203ENST00000358028 MTHFD1LQ6UB35 978 aa15□□□□□ -0.01
NIPAL3-203ENST00000358028 GSTA5Q7RTV2 222 aa15□□□□□ -0.01
NIPAL3-203ENST00000358028 SLC4A11Q8NBS3 891 aa15□□□□□ -0.01
NIPAL3-203ENST00000358028 CXorf38Q8TB03 319 aa15□□□□□ -0.01
NIPAL3-203ENST00000358028 ARHGEF2Q92974 986 aaKnown RBP15□□□□□ -0.01
NIPAL3-203ENST00000358028 ELOVL4Q9GZR5 314 aa15□□□□□ -0.01
NIPAL3-203ENST00000358028 VRTNQ9H8Y1 702 aa15□□□□□ -0.01
NIPAL3-203ENST00000358028 CYP3A43Q9HB55 503 aa15□□□□□ -0.01
NIPAL3-203ENST00000358028 NINJ2Q9NZG7 142 aa15□□□□□ -0.01
NIPAL3-203ENST00000358028 GTF2IRD1Q9UHL9 959 aa15□□□□□ -0.01
NIPAL3-203ENST00000358028 TBX21Q9UL17 535 aa15□□□□□ -0.01
NIPAL3-203ENST00000358028 ACTL7BQ9Y614 415 aa15□□□□□ -0.01
NIPAL3-203ENST00000358028 CILPO75339 1184 aa14.99□□□□□ -0.01
NIPAL3-203ENST00000358028 ACSL3O95573 720 aa14.99□□□□□ -0.01
NIPAL3-203ENST00000358028 SMIM10L2AP0DMW4 78 aa14.99□□□□□ -0.01
NIPAL3-203ENST00000358028 SMIM10L2BP0DMW5 78 aa14.99□□□□□ -0.01
NIPAL3-203ENST00000358028 ARF4P18085 180 aaPredicted RBP14.99□□□□□ -0.01
NIPAL3-203ENST00000358028 PSMA2P25787 234 aa14.99□□□□□ -0.01
NIPAL3-203ENST00000358028 MAGEA10P43363 369 aaPredicted RBP14.99□□□□□ -0.01
NIPAL3-203ENST00000358028 GSCP56915 257 aaPredicted RBP14.99□□□□□ -0.01
NIPAL3-203ENST00000358028 ZNF200P98182 395 aaPredicted RBP14.99□□□□□ -0.01
NIPAL3-203ENST00000358028 PTPN11Q06124 597 aaPredicted RBP14.99□□□□□ -0.01
NIPAL3-203ENST00000358028 TXNRD3NBQ6F5E7 133 aa14.99□□□□□ -0.01
NIPAL3-203ENST00000358028 POLNQ7Z5Q5 900 aa14.99□□□□□ -0.01
NIPAL3-203ENST00000358028 LRRC34Q8IZ02 419 aa14.99□□□□□ -0.01
NIPAL3-203ENST00000358028 ZCCHC9Q8N567 271 aaKnown RBP14.99□□□□□ -0.01
NIPAL3-203ENST00000358028 JOSD2Q8TAC2 188 aa14.99□□□□□ -0.01
NIPAL3-203ENST00000358028 TWNKQ96RR1 684 aa14.99□□□□□ -0.01
NIPAL3-203ENST00000358028 PRMT1Q99873 361 aaKnown RBP14.99□□□□□ -0.01
NIPAL3-203ENST00000358028 SEZ6LQ9BYH1 1024 aa14.99□□□□□ -0.01
NIPAL3-203ENST00000358028 TMEM39AQ9NV64 488 aa14.99□□□□□ -0.01
NIPAL3-203ENST00000358028 DNAJC17Q9NVM6 304 aaKnown RBP14.99□□□□□ -0.01
NIPAL3-203ENST00000358028 WDR35Q9P2L0 1181 aa14.99□□□□□ -0.01
NIPAL3-203ENST00000358028 TJP2Q9UDY2 1190 aa14.99□□□□□ -0.01
NIPAL3-203ENST00000358028 DNPEPQ9ULA0 475 aa14.99□□□□□ -0.01
NIPAL3-203ENST00000358028 LRRD1A4D1F6 860 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 CDH16O75309 829 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 RASSF9O75901 435 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 DNAJC8O75937 253 aaPredicted RBP14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 CYP2C9P11712 490 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 KRT3P12035 628 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 P4HA1P13674 534 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 RFC1P35251 1148 aaPredicted RBP14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 CDKN2BP42772 138 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 PSMC1P62191 440 aaKnown RBP14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 NR1H3Q13133 447 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 ORC1Q13415 861 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 TMEM132DQ14C87 1099 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 LONRF1Q17RB8 773 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 SLC10A6Q3KNW5 377 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 TFDP3Q5H9I0 405 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 HIBCHQ6NVY1 386 aaPredicted RBP14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 XYLT1Q86Y38 959 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 ACSF2Q96CM8 615 aaPredicted RBP14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 TMEM176AQ96HP8 235 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 PRKAG2Q9UGJ0 569 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 HMGXB4Q9UGU5 601 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 DRG1Q9Y295 367 aaKnown RBP14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 KIAA0355O15063 1070 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 TSPAN1O60635 241 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 MICAL2O94851 1124 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 HOXC8P31273 242 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 SLC25A11Q02978 314 aaKnown RBP14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 ZNF268Q14587 947 aaPredicted RBP14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 KYNUQ16719 465 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 P3H1Q32P28 736 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 PRUNE1Q86TP1 453 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 ALLCQ8N6M5 410 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 FNIP1Q8TF40 1166 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 NLRP7Q8WX94 980 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 PWWP2AQ96N64 755 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 TTC25Q96NG3 672 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 CPXM1Q96SM3 734 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 PLCD4Q9BRC7 762 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 PPP1R12CQ9BZL4 782 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 PPCSQ9HAB8 311 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 METTL5Q9NRN9 209 aaKnown RBP14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 ZNF148Q9UQR1 794 aa14.98□□□□□ -0.01
NIPAL3-203ENST00000358028 TMEM120BA0PK00 339 aa14.97□□□□□ -0.01
NIPAL3-203ENST00000358028 DNALI1O14645 258 aaPredicted RBP14.97□□□□□ -0.01
NIPAL3-203ENST00000358028 ERBB2P04626 1255 aa14.97□□□□□ -0.01
NIPAL3-203ENST00000358028 VIMP08670 466 aaKnown RBP14.97□□□□□ -0.01
NIPAL3-203ENST00000358028 SCTRP47872 440 aa14.97□□□□□ -0.01
NIPAL3-203ENST00000358028 VCPP55072 806 aaKnown RBP14.97□□□□□ -0.01
NIPAL3-203ENST00000358028 SWT1Q5T5J6 900 aaKnown RBP14.97□□□□□ -0.01
NIPAL3-203ENST00000358028 DYDC1Q8WWB3 177 aa14.97□□□□□ -0.01
NIPAL3-203ENST00000358028 HPDLQ96IR7 371 aa14.97□□□□□ -0.01
NIPAL3-203ENST00000358028 CFAP57Q96MR6 1250 aa14.97□□□□□ -0.01
NIPAL3-203ENST00000358028 FRMD8P1Q9BZ68 369 aaPredicted RBP14.97□□□□□ -0.01
NIPAL3-203ENST00000358028 SYNCQ9H7C4 482 aa14.97□□□□□ -0.01
NIPAL3-203ENST00000358028 SLC40A1Q9NP59 571 aa14.97□□□□□ -0.01
NIPAL3-203ENST00000358028 SETD4Q9NVD3 440 aa14.97□□□□□ -0.01
NIPAL3-203ENST00000358028 ITGA11Q9UKX5 1188 aa14.97□□□□□ -0.01
NIPAL3-203ENST00000358028 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms