RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 PDPK2PQ6A1A2 396 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 GPR63Q9BZJ6 419 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 SAC3D1A6NKF1 404 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 HBP1O60381 514 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 PMPCBO75439 489 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 ITGB3P05106 788 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 FAM200BP0CF97 657 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 WASHC5Q12768 1159 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 MMRN1Q13201 1228 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 LRRC8DQ7L1W4 858 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 TMC3Q7Z5M5 1100 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 RIN3Q8TB24 985 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 MTMR8Q96EF0 704 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 MADDQ8WXG6 1647 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 ZNF839A8K0R7 811 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 TP53BP2Q13625 1128 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 CLEC16AQ2KHT3 1053 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 ACBD5Q5T8D3 534 aaPredicted RBP15.35■□□□□ 0.05
CHD4-201ENST00000357008 EFCAB12Q6NXP0 572 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 TMEM121Q9BTD3 319 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 R3HDM1Q15032 1099 aaKnown RBP15.35■□□□□ 0.05
CHD4-201ENST00000357008 USE1Q9NZ43 259 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 TRMT6Q9UJA5 497 aaKnown RBP15.35■□□□□ 0.05
CHD4-201ENST00000357008 GAS2O43903 313 aaKnown RBP15.35■□□□□ 0.05
CHD4-201ENST00000357008 FAM58BPP0C7Q3 252 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 ARHGEF7Q14155 803 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 KCNT1Q5JUK3 1230 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 MFSD14CQ5VZR4 134 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 DCP1BQ8IZD4 617 aaKnown RBP15.35■□□□□ 0.05
CHD4-201ENST00000357008 TMC2Q8TDI7 906 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 AENQ8WTP8 325 aaKnown RBP15.35■□□□□ 0.05
CHD4-201ENST00000357008 GLMNQ92990 594 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 GPRASP2Q96D09 838 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 BTBD10Q9BSF8 475 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 C15orf41Q9Y2V0 281 aa15.35■□□□□ 0.05
CHD4-201ENST00000357008 HEATR9A2RTY3 570 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 UBE2Q2LH0YL09 131 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 RGS5O15539 181 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 SNX30Q5VWJ9 437 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 NAIF1Q69YI7 327 aaPredicted RBP15.34■□□□□ 0.05
CHD4-201ENST00000357008 ADCK2Q7Z695 626 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 ZNF280CQ8ND82 737 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 SHOC2Q9UQ13 582 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 VDRP11473 427 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 GARTP22102 1010 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 ZNF844Q08AG5 666 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 TBL3Q12788 808 aaKnown RBP15.34■□□□□ 0.05
CHD4-201ENST00000357008 MAPRE1Q15691 268 aaKnown RBP15.34■□□□□ 0.05
CHD4-201ENST00000357008 KLHL25Q9H0H3 589 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 TADA2AO75478 443 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 CAMTA2O94983 1202 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 AVPR1AP37288 418 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 LRRC71Q8N4P6 559 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 NCKIPSDQ9NZQ3 722 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 E9PBE3 544 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 M0QYT0 321 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 OGTO15294 1046 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 KLHL41O60662 606 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 PPP4CP60510 307 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 RAB14P61106 215 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.34■□□□□ 0.05
CHD4-201ENST00000357008 LAMC2Q13753 1193 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 MYBPC2Q14324 1141 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 CNPY3Q9BT09 278 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 ZCWPW1Q9H0M4 648 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 PCDH9Q9HC56 1237 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 WWOXQ9NZC7 414 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 SETBP1Q9Y6X0 1596 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 NFYCQ13952 458 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 TTLL9Q3SXZ7 439 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 FAM151AQ8WW52 585 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 CTNNAL1Q9UBT7 734 aa15.34■□□□□ 0.05
CHD4-201ENST00000357008 PLEKHA7Q6IQ23 1121 aa15.33■□□□□ 0.05
CHD4-201ENST00000357008 ERAP1Q9NZ08 941 aa15.33■□□□□ 0.05
CHD4-201ENST00000357008 RNF112Q9ULX5 631 aa15.33■□□□□ 0.05
CHD4-201ENST00000357008 STX7O15400 261 aaKnown RBP15.33■□□□□ 0.04
CHD4-201ENST00000357008 AKAP3O75969 853 aa15.33■□□□□ 0.04
CHD4-201ENST00000357008 LSM8O95777 96 aaKnown RBP15.33■□□□□ 0.04
CHD4-201ENST00000357008 ALDH1A1P00352 501 aa15.33■□□□□ 0.04
CHD4-201ENST00000357008 ITGA4P13612 1032 aa15.33■□□□□ 0.04
CHD4-201ENST00000357008 SOAT1P35610 550 aa15.33■□□□□ 0.04
CHD4-201ENST00000357008 TAF6P49848 677 aa15.33■□□□□ 0.04
CHD4-201ENST00000357008 C2CD6Q53TS8 623 aa15.33■□□□□ 0.04
CHD4-201ENST00000357008 HOMEZQ8IX15 550 aa15.33■□□□□ 0.04
CHD4-201ENST00000357008 DEFB107AQ8IZN7 70 aa15.33■□□□□ 0.04
CHD4-201ENST00000357008 FAM9CQ8IZT9 166 aa15.33■□□□□ 0.04
CHD4-201ENST00000357008 KYQ8NBH2 561 aa15.33■□□□□ 0.04
CHD4-201ENST00000357008 MTERF3Q96E29 417 aa15.33■□□□□ 0.04
CHD4-201ENST00000357008 KATNAL1Q9BW62 490 aa15.33■□□□□ 0.04
CHD4-201ENST00000357008 CHST12Q9NRB3 414 aa15.33■□□□□ 0.04
CHD4-201ENST00000357008 RNF17Q9BXT8 1623 aaKnown RBP15.33■□□□□ 0.04
CHD4-201ENST00000357008 SASH3O75995 380 aa15.33■□□□□ 0.04
CHD4-201ENST00000357008 RBP1P09455 135 aa15.33■□□□□ 0.04
CHD4-201ENST00000357008 ETFBP38117 255 aa15.33■□□□□ 0.04
CHD4-201ENST00000357008 PRIM2P49643 509 aa15.33■□□□□ 0.04
CHD4-201ENST00000357008 TBX2Q13207 712 aaPredicted RBP15.33■□□□□ 0.04
CHD4-201ENST00000357008 PCNX4Q63HM2 1172 aa15.33■□□□□ 0.04
CHD4-201ENST00000357008 TAF2Q6P1X5 1199 aa15.33■□□□□ 0.04
CHD4-201ENST00000357008 WDCPQ9H6R7 721 aa15.33■□□□□ 0.04
CHD4-201ENST00000357008 RMND5AQ9H871 391 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms