RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 PLEKHG4Q58EX7 1191 aa20.44■□□□□ 0.86
COL13A1-201ENST00000354547 HOMEZQ8IX15 550 aa20.44■□□□□ 0.86
COL13A1-201ENST00000354547 RXFP2Q8WXD0 754 aa20.44■□□□□ 0.86
COL13A1-201ENST00000354547 PTPRN2Q92932 1015 aa20.44■□□□□ 0.86
COL13A1-201ENST00000354547 FAF2Q96CS3 445 aa20.44■□□□□ 0.86
COL13A1-201ENST00000354547 A0A087WZ62 844 aa20.44■□□□□ 0.86
COL13A1-201ENST00000354547 EIF4E1BA6NMX2 242 aaKnown RBP20.44■□□□□ 0.86
COL13A1-201ENST00000354547 APOC4-APOC2K7ER74 178 aa20.44■□□□□ 0.86
COL13A1-201ENST00000354547 APOC2P02655 101 aa20.44■□□□□ 0.86
COL13A1-201ENST00000354547 VTNP04004 478 aa20.44■□□□□ 0.86
COL13A1-201ENST00000354547 TXNP10599 105 aaKnown RBP20.44■□□□□ 0.86
COL13A1-201ENST00000354547 YARSP54577 528 aaKnown RBP20.44■□□□□ 0.86
COL13A1-201ENST00000354547 ROR1Q01973 937 aa20.44■□□□□ 0.86
COL13A1-201ENST00000354547 MBTD1Q05BQ5 628 aa20.44■□□□□ 0.86
COL13A1-201ENST00000354547 NAA25Q14CX7 972 aa20.44■□□□□ 0.86
COL13A1-201ENST00000354547 Q3C1V9 767 aa20.44■□□□□ 0.86
COL13A1-201ENST00000354547 MOB2Q70IA6 237 aa20.44■□□□□ 0.86
COL13A1-201ENST00000354547 NLRP9Q7RTR0 991 aa20.44■□□□□ 0.86
COL13A1-201ENST00000354547 DCAKDQ8WVC6 231 aa20.44■□□□□ 0.86
COL13A1-201ENST00000354547 C10orf82Q8WW14 230 aa20.44■□□□□ 0.86
COL13A1-201ENST00000354547 L3MBTL3Q96JM7 780 aaPredicted RBP20.44■□□□□ 0.86
COL13A1-201ENST00000354547 FDXACB1Q9BRP7 624 aaPredicted RBP20.44■□□□□ 0.86
COL13A1-201ENST00000354547 FZD8Q9H461 694 aa20.44■□□□□ 0.86
COL13A1-201ENST00000354547 TXNRD2Q9NNW7 524 aa20.44■□□□□ 0.86
COL13A1-201ENST00000354547 NGRNQ9NPE2 291 aaKnown RBP20.44■□□□□ 0.86
COL13A1-201ENST00000354547 RAB6BQ9NRW1 208 aa20.44■□□□□ 0.86
COL13A1-201ENST00000354547 SSC5DA1L4H1 1573 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 C2orf71A6NGG8 1288 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 E5RJQ4 531 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 PROZP22891 400 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 EPHB2P29323 1055 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 PTK7Q13308 1070 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 ADGRD1Q6QNK2 874 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 CCDC125Q86Z20 511 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 KCNN1Q92952 543 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 FAM111AQ96PZ2 611 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 NOP53Q9NZM5 478 aaKnown RBP20.43■□□□□ 0.86
COL13A1-201ENST00000354547 AKT3Q9Y243 479 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 GINS2Q9Y248 185 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 CSADQ9Y600 493 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 NUMBLQ9Y6R0 609 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 LPXNO60711 386 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 FAAP100Q0VG06 881 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 KRT81Q14533 505 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 KLHL38Q2WGJ6 581 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 ZC3H12AQ5D1E8 599 aaKnown RBP20.43■□□□□ 0.86
COL13A1-201ENST00000354547 FYB2Q5VWT5 728 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 TRNP1Q6NT89 227 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 SLC16A10Q8TF71 515 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 HPDLQ96IR7 371 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 CLMNQ96JQ2 1002 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 ZFP69BQ9UJL9 534 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 F5H423 210 aaPredicted RBP20.43■□□□□ 0.86
COL13A1-201ENST00000354547 H0Y3Z8 333 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 DCTN3O75935 186 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 ZWINTO95229 277 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 LONP2Q86WA8 852 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 SERAC1Q96JX3 654 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 BCO2Q9BYV7 579 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 ASNSD1Q9NWL6 643 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 GPRC5DQ9NZD1 345 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 C15orf41Q9Y2V0 281 aa20.43■□□□□ 0.86
COL13A1-201ENST00000354547 MGAMO43451 1857 aa20.42■□□□□ 0.86
COL13A1-201ENST00000354547 TCRBV9S1A1TA0A576 114 aa20.42■□□□□ 0.86
COL13A1-201ENST00000354547 KCNN4O15554 427 aa20.42■□□□□ 0.86
COL13A1-201ENST00000354547 T-ENOLP0DO92 83 aa20.42■□□□□ 0.86
COL13A1-201ENST00000354547 GPD2P43304 727 aa20.42■□□□□ 0.86
COL13A1-201ENST00000354547 NDST1P52848 882 aa20.42■□□□□ 0.86
COL13A1-201ENST00000354547 PPP6R3Q5H9R7 873 aaPredicted RBP20.42■□□□□ 0.86
COL13A1-201ENST00000354547 CMASQ8NFW8 434 aaPredicted RBP20.42■□□□□ 0.86
COL13A1-201ENST00000354547 TRIM56Q9BRZ2 755 aaKnown RBP20.42■□□□□ 0.86
COL13A1-201ENST00000354547 MANSC1Q9H8J5 431 aa20.42■□□□□ 0.86
COL13A1-201ENST00000354547 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.42■□□□□ 0.86
COL13A1-201ENST00000354547 IGKV6-21A0A0C4DH24 114 aa20.42■□□□□ 0.86
COL13A1-201ENST00000354547 ADM5C9JUS6 153 aa20.42■□□□□ 0.86
COL13A1-201ENST00000354547 SOCS7O14512 581 aa20.42■□□□□ 0.86
COL13A1-201ENST00000354547 CILPO75339 1184 aa20.42■□□□□ 0.86
COL13A1-201ENST00000354547 INHBAP08476 426 aa20.42■□□□□ 0.86
COL13A1-201ENST00000354547 PYGBP11216 843 aa20.42■□□□□ 0.86
COL13A1-201ENST00000354547 ATP2A2P16615 1042 aaKnown RBP20.42■□□□□ 0.86
COL13A1-201ENST00000354547 CCND1P24385 295 aa20.42■□□□□ 0.86
COL13A1-201ENST00000354547 SH3D19Q5HYK7 790 aa20.42■□□□□ 0.86
COL13A1-201ENST00000354547 PRPF39Q86UA1 669 aaKnown RBP20.42■□□□□ 0.86
COL13A1-201ENST00000354547 NKX1-2Q9UD57 310 aaPredicted RBP20.42■□□□□ 0.86
COL13A1-201ENST00000354547 PRPSAP2O60256 369 aa20.41■□□□□ 0.86
COL13A1-201ENST00000354547 FAM183BPQ6ZVS7 135 aa20.41■□□□□ 0.86
COL13A1-201ENST00000354547 PPM1NQ8N819 430 aa20.41■□□□□ 0.86
COL13A1-201ENST00000354547 RAB3IPQ96QF0 476 aaPredicted RBP20.41■□□□□ 0.86
COL13A1-201ENST00000354547 CYTH2Q99418 400 aa20.41■□□□□ 0.86
COL13A1-201ENST00000354547 TBC1D10AQ9BXI6 508 aa20.41■□□□□ 0.86
COL13A1-201ENST00000354547 EBF2Q9HAK2 575 aa20.41■□□□□ 0.86
COL13A1-201ENST00000354547 FAM49BQ9NUQ9 324 aa20.41■□□□□ 0.86
COL13A1-201ENST00000354547 GEMIN8Q9NWZ8 242 aaKnown RBP20.41■□□□□ 0.86
COL13A1-201ENST00000354547 WDR35Q9P2L0 1181 aa20.41■□□□□ 0.86
COL13A1-201ENST00000354547 ZMYND8Q9ULU4 1186 aaPredicted RBP20.41■□□□□ 0.86
COL13A1-201ENST00000354547 MCM3APO60318 1980 aa20.41■□□□□ 0.86
COL13A1-201ENST00000354547 SIP14410 1827 aa20.41■□□□□ 0.86
COL13A1-201ENST00000354547 ALADP13716 330 aa20.41■□□□□ 0.86
COL13A1-201ENST00000354547 GPD1P21695 349 aa20.41■□□□□ 0.86
COL13A1-201ENST00000354547 CCDC15Q0P6D6 951 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms