RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 PICK1Q9NRD5 415 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 PRKAG3Q9UGI9 489 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 IP6K2Q9UHH9 426 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 ADAM30Q9UKF2 790 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 ASB3Q9Y575 518 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 MYO1DO94832 1006 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 UCHL3P15374 230 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 TCN1P20061 433 aaPredicted RBP5.21□□□□□ -1.58
SKP1-202ENST00000353411 IL32P24001 234 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 GJA9P57773 515 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 TAP1Q03518 808 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 LAMC2Q13753 1193 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 DRAP1Q14919 205 aaPredicted RBP5.21□□□□□ -1.58
SKP1-202ENST00000353411 TIMM50Q3ZCQ8 353 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 GPR107Q5VW38 600 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 PDPK2PQ6A1A2 396 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 TRIM72Q6ZMU5 477 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 MB21D2Q8IYB1 491 aaPredicted RBP5.21□□□□□ -1.58
SKP1-202ENST00000353411 ELMOD2Q8IZ81 293 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 RDH13Q8NBN7 331 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 PSMA8Q8TAA3 256 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 KCTD4Q8WVF5 259 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 TLCD1Q96CP7 247 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 PACSIN1Q9BY11 444 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 ZBTB3Q9H5J0 574 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 EFR3BQ9Y2G0 817 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 FRMPD1Q5SYB0 1578 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 CPDO75976 1380 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 CCRL2O00421 344 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 TFRCP02786 760 aaKnown RBP5.21□□□□□ -1.58
SKP1-202ENST00000353411 SERPINA6P08185 405 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 PLEKP08567 350 aaPredicted RBP5.21□□□□□ -1.58
SKP1-202ENST00000353411 NPR1P16066 1061 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 ZNF16P17020 682 aaPredicted RBP5.21□□□□□ -1.58
SKP1-202ENST00000353411 TNNI1P19237 187 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 HLA-DPA1P20036 260 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 TRIQKQ629K1 86 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 FAM45BPQ6NSW5 357 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 TTI2Q6NXR4 508 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 GLYCTKQ8IVS8 523 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 ZSCAN29Q8IWY8 852 aaPredicted RBP5.21□□□□□ -1.58
SKP1-202ENST00000353411 PIK3C3Q8NEB9 887 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 FAR2Q96K12 515 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 DNAJC1Q96KC8 554 aaKnown RBP5.21□□□□□ -1.58
SKP1-202ENST00000353411 ZSWIM1Q9BR11 485 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 EMILIN2Q9BXX0 1053 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 FRMD8P1Q9BZ68 369 aaPredicted RBP5.21□□□□□ -1.58
SKP1-202ENST00000353411 ABCB10Q9NRK6 738 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 SERPINB13Q9UIV8 391 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 ALG6Q9Y672 507 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 CDC42BPBQ9Y5S2 1711 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 MYH7BA7E2Y1 1941 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 BTBD19C9JJ37 291 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 PDPK1O15530 556 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 NADKO95544 446 aaPredicted RBP5.21□□□□□ -1.58
SKP1-202ENST00000353411 F8A1P23610 371 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 PSMC6P62333 389 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 ENPEPQ07075 957 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 TRAP1Q12931 704 aaKnown RBP5.21□□□□□ -1.58
SKP1-202ENST00000353411 TFDP2Q14188 446 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 RABL6Q3YEC7 729 aaPredicted RBP5.21□□□□□ -1.58
SKP1-202ENST00000353411 MZT2BQ6NZ67 158 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 LCORLQ8N3X6 602 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 HM13Q8TCT9 377 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 RAB2BQ8WUD1 216 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 MKL1Q969V6 931 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 TP53INP1Q96A56 240 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 TMEM109Q9BVC6 243 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 HEMGNQ9BXL5 484 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 TRIM9Q9C026 710 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 ILKAPQ9H0C8 392 aaPredicted RBP5.21□□□□□ -1.58
SKP1-202ENST00000353411 POLR1BQ9H9Y6 1135 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 AS3MTQ9HBK9 375 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 VTA1Q9NP79 307 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 MAP1BP46821 2468 aaKnown RBP5.21□□□□□ -1.58
SKP1-202ENST00000353411 BTNL10A8MVZ5 291 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 PSMD11O00231 422 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 OXSR1O95747 527 aaPredicted RBP5.21□□□□□ -1.58
SKP1-202ENST00000353411 PRKACAP17612 351 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 CD53P19397 219 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 LLGL1Q15334 1064 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 KCNT1Q5JUK3 1230 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 SETD9Q8NE22 299 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 KRT35Q92764 455 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 VPS39Q96JC1 886 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 GJB4Q9NTQ9 266 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 CRNNQ9UBG3 495 aaPredicted RBP5.21□□□□□ -1.58
SKP1-202ENST00000353411 PRPF19Q9UMS4 504 aaKnown RBP5.21□□□□□ -1.58
SKP1-202ENST00000353411 ZMYM2Q9UBW7 1377 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 PNPLA7Q6ZV29 1317 aa5.21□□□□□ -1.58
SKP1-202ENST00000353411 CLDN3O15551 220 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 TSPAN1O60635 241 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 ABHD2P08910 425 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 ZNF23P17027 643 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 OSBPP22059 807 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 DYNLT1P63172 113 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 TTC23LQ6PF05 361 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 CCDC81Q6ZN84 652 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 CDAN1Q8IWY9 1227 aa5.2□□□□□ -1.58
SKP1-202ENST00000353411 PPIL6Q8IXY8 311 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms