RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 SLC16A10Q8TF71 515 aa23.9■■□□□ 1.42
NPAS3-201ENST00000346562 KLF6Q99612 283 aaPredicted RBP23.9■■□□□ 1.42
NPAS3-201ENST00000346562 PDGFCQ9NRA1 345 aa23.9■■□□□ 1.42
NPAS3-201ENST00000346562 TBC1D23Q9NUY8 699 aa23.9■■□□□ 1.42
NPAS3-201ENST00000346562 NFKBIL1Q9UBC1 381 aaPredicted RBP23.9■■□□□ 1.42
NPAS3-201ENST00000346562 SEPT3Q9UH03 358 aa23.9■■□□□ 1.42
NPAS3-201ENST00000346562 MED14O60244 1454 aa23.9■■□□□ 1.42
NPAS3-201ENST00000346562 USP1O94782 785 aa23.9■■□□□ 1.42
NPAS3-201ENST00000346562 HPGDP15428 266 aa23.9■■□□□ 1.42
NPAS3-201ENST00000346562 CCNI2Q6ZMN8 369 aaPredicted RBP23.9■■□□□ 1.42
NPAS3-201ENST00000346562 LUZP2Q86TE4 346 aa23.9■■□□□ 1.42
NPAS3-201ENST00000346562 CERKQ8TCT0 537 aa23.9■■□□□ 1.42
NPAS3-201ENST00000346562 PNKPQ96T60 521 aa23.9■■□□□ 1.42
NPAS3-201ENST00000346562 PNMA8BQ9ULN7 279 aaPredicted RBP23.9■■□□□ 1.42
NPAS3-201ENST00000346562 MMP14P50281 582 aa23.9■■□□□ 1.42
NPAS3-201ENST00000346562 KYNUQ16719 465 aa23.9■■□□□ 1.42
NPAS3-201ENST00000346562 ZNF280DQ6N043 979 aa23.9■■□□□ 1.42
NPAS3-201ENST00000346562 DENND1BQ6P3S1 775 aa23.9■■□□□ 1.42
NPAS3-201ENST00000346562 RHOAP61586 193 aa23.9■■□□□ 1.42
NPAS3-201ENST00000346562 PLCL1Q15111 1095 aa23.9■■□□□ 1.42
NPAS3-201ENST00000346562 CYP51A1Q16850 503 aa23.9■■□□□ 1.42
NPAS3-201ENST00000346562 DDI1Q8WTU0 396 aa23.9■■□□□ 1.42
NPAS3-201ENST00000346562 V9GYQ6 96 aa23.9■■□□□ 1.42
NPAS3-201ENST00000346562 TIMM44O43615 452 aa23.9■■□□□ 1.42
NPAS3-201ENST00000346562 RFX3P48380 749 aa23.9■■□□□ 1.42
NPAS3-201ENST00000346562 DDX39BQ13838 428 aaKnown RBP23.9■■□□□ 1.42
NPAS3-201ENST00000346562 MIB1Q86YT6 1006 aa23.9■■□□□ 1.42
NPAS3-201ENST00000346562 ARMC2Q8NEN0 867 aa23.9■■□□□ 1.42
NPAS3-201ENST00000346562 VPS28Q9UK41 221 aa23.9■■□□□ 1.42
NPAS3-201ENST00000346562 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.9■■□□□ 1.42
NPAS3-201ENST00000346562 PCDHB12Q9Y5F1 795 aa23.9■■□□□ 1.42
NPAS3-201ENST00000346562 ADGRB3O60242 1522 aa23.89■■□□□ 1.42
NPAS3-201ENST00000346562 NKRFO15226 690 aaKnown RBP eCLIP23.89■■□□□ 1.42
NPAS3-201ENST00000346562 ZC3H11AO75152 810 aaKnown RBP eCLIP23.89■■□□□ 1.42
NPAS3-201ENST00000346562 CEP78Q5JTW2 689 aa23.89■■□□□ 1.42
NPAS3-201ENST00000346562 BARGINQ6ZT62 677 aa23.89■■□□□ 1.42
NPAS3-201ENST00000346562 RUVBL2Q9Y230 463 aaKnown RBP23.89■■□□□ 1.42
NPAS3-201ENST00000346562 COPAP53621 1224 aa23.89■■□□□ 1.42
NPAS3-201ENST00000346562 ICE2Q659A1 982 aa23.89■■□□□ 1.42
NPAS3-201ENST00000346562 CCT8L2Q96SF2 557 aa23.89■■□□□ 1.42
NPAS3-201ENST00000346562 KRT84Q9NSB2 600 aa23.89■■□□□ 1.42
NPAS3-201ENST00000346562 PHF20L1A8MW92 1017 aa23.89■■□□□ 1.41
NPAS3-201ENST00000346562 TRIM49D1C9J1S8 452 aa23.89■■□□□ 1.41
NPAS3-201ENST00000346562 EIF3HO15372 352 aaKnown RBP eCLIP23.89■■□□□ 1.41
NPAS3-201ENST00000346562 NDUFB5O43674 189 aa23.89■■□□□ 1.41
NPAS3-201ENST00000346562 EIF2S1P05198 315 aaKnown RBP23.89■■□□□ 1.41
NPAS3-201ENST00000346562 ERFP50548 548 aa23.89■■□□□ 1.41
NPAS3-201ENST00000346562 EPC2Q52LR7 807 aa23.89■■□□□ 1.41
NPAS3-201ENST00000346562 OTOAQ7RTW8 1153 aa23.89■■□□□ 1.41
NPAS3-201ENST00000346562 ADGRE3Q9BY15 652 aa23.89■■□□□ 1.41
NPAS3-201ENST00000346562 PAPOLBQ9NRJ5 636 aaKnown RBP23.89■■□□□ 1.41
NPAS3-201ENST00000346562 UTP6Q9NYH9 597 aaKnown RBP23.89■■□□□ 1.41
NPAS3-201ENST00000346562 TMCC3Q9ULS5 477 aa23.89■■□□□ 1.41
NPAS3-201ENST00000346562 IFNA14P01570 189 aa23.89■■□□□ 1.41
NPAS3-201ENST00000346562 SMIM5Q71RC9 77 aa23.89■■□□□ 1.41
NPAS3-201ENST00000346562 TUBGCP3Q96CW5 907 aa23.89■■□□□ 1.41
NPAS3-201ENST00000346562 CGRRF1Q99675 332 aa23.89■■□□□ 1.41
NPAS3-201ENST00000346562 EPB41L4AQ9HCS5 686 aaPredicted RBP23.89■■□□□ 1.41
NPAS3-201ENST00000346562 NLRP9Q7RTR0 991 aa23.88■■□□□ 1.41
NPAS3-201ENST00000346562 ADARB2Q9NS39 739 aaKnown RBP23.88■■□□□ 1.41
NPAS3-201ENST00000346562 SUPT7LO94864 414 aa23.88■■□□□ 1.41
NPAS3-201ENST00000346562 KRT20P35900 424 aa23.88■■□□□ 1.41
NPAS3-201ENST00000346562 SEC16BQ96JE7 1060 aa23.88■■□□□ 1.41
NPAS3-201ENST00000346562 WDR41Q9HAD4 459 aa23.88■■□□□ 1.41
NPAS3-201ENST00000346562 CASP10Q92851 521 aa23.88■■□□□ 1.41
NPAS3-201ENST00000346562 WBP4O75554 376 aaKnown RBP23.88■■□□□ 1.41
NPAS3-201ENST00000346562 FYNP06241 537 aa23.88■■□□□ 1.41
NPAS3-201ENST00000346562 CAP2P40123 477 aa23.88■■□□□ 1.41
NPAS3-201ENST00000346562 RPS7P62081 194 aaKnown RBP23.88■■□□□ 1.41
NPAS3-201ENST00000346562 FUT11Q495W5 492 aa23.88■■□□□ 1.41
NPAS3-201ENST00000346562 USP39Q53GS9 565 aaKnown RBP23.88■■□□□ 1.41
NPAS3-201ENST00000346562 TRPM8Q7Z2W7 1104 aa23.88■■□□□ 1.41
NPAS3-201ENST00000346562 SERPINB12Q96P63 405 aa23.88■■□□□ 1.41
NPAS3-201ENST00000346562 LRRC7Q96NW7 1537 aa23.88■■□□□ 1.41
NPAS3-201ENST00000346562 ACOT1Q86TX2 421 aa23.88■■□□□ 1.41
NPAS3-201ENST00000346562 SGF29Q96ES7 293 aa23.88■■□□□ 1.41
NPAS3-201ENST00000346562 ZSWIM1Q9BR11 485 aa23.88■■□□□ 1.41
NPAS3-201ENST00000346562 ZNF518BQ9C0D4 1074 aa23.88■■□□□ 1.41
NPAS3-201ENST00000346562 CYP39A1Q9NYL5 469 aa23.88■■□□□ 1.41
NPAS3-201ENST00000346562 NCF1BA6NI72 391 aaPredicted RBP23.87■■□□□ 1.41
NPAS3-201ENST00000346562 NCF1CA8MVU1 366 aaPredicted RBP23.87■■□□□ 1.41
NPAS3-201ENST00000346562 NCF1P14598 390 aaPredicted RBP23.87■■□□□ 1.41
NPAS3-201ENST00000346562 MTA1Q13330 715 aa23.87■■□□□ 1.41
NPAS3-201ENST00000346562 ZNF544Q6NX49 715 aa23.87■■□□□ 1.41
NPAS3-201ENST00000346562 FGD2Q7Z6J4 655 aa23.87■■□□□ 1.41
NPAS3-201ENST00000346562 C3orf20Q8ND61 904 aa23.87■■□□□ 1.41
NPAS3-201ENST00000346562 ZKSCAN4Q969J2 545 aaPredicted RBP23.87■■□□□ 1.41
NPAS3-201ENST00000346562 RPS6KL1Q9Y6S9 549 aa23.87■■□□□ 1.41
NPAS3-201ENST00000346562 SDR42E2A6NKP2 422 aa23.87■■□□□ 1.41
NPAS3-201ENST00000346562 KCNA3P22001 575 aa23.87■■□□□ 1.41
NPAS3-201ENST00000346562 GALNTL6Q49A17 601 aa23.87■■□□□ 1.41
NPAS3-201ENST00000346562 CCT7Q99832 543 aa23.87■■□□□ 1.41
NPAS3-201ENST00000346562 CCDC3Q9BQI4 270 aa23.87■■□□□ 1.41
NPAS3-201ENST00000346562 MTMR12Q9C0I1 747 aa23.87■■□□□ 1.41
NPAS3-201ENST00000346562 TK2O00142 265 aa23.87■■□□□ 1.41
NPAS3-201ENST00000346562 ZW10O43264 779 aa23.87■■□□□ 1.41
NPAS3-201ENST00000346562 THP07101 528 aa23.87■■□□□ 1.41
NPAS3-201ENST00000346562 PCNAP12004 261 aa23.87■■□□□ 1.41
NPAS3-201ENST00000346562 PGS1Q32NB8 556 aa23.87■■□□□ 1.41
NPAS3-201ENST00000346562 ERO1BQ86YB8 467 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms