RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 CAPN11Q9UMQ6 739 aa14.64□□□□□ -0.07
TPM4-202ENST00000344824 LUC7L2Q9Y383 392 aaKnown RBP14.64□□□□□ -0.07
TPM4-202ENST00000344824 PATJQ8NI35 1801 aa14.63□□□□□ -0.07
TPM4-202ENST00000344824 SLC38A8A6NNN8 435 aa14.63□□□□□ -0.07
TPM4-202ENST00000344824 DPYSL4O14531 572 aa14.63□□□□□ -0.07
TPM4-202ENST00000344824 FGF19O95750 216 aa14.63□□□□□ -0.07
TPM4-202ENST00000344824 ASS1P00966 412 aaKnown RBP14.63□□□□□ -0.07
TPM4-202ENST00000344824 PTPN1P18031 435 aaKnown RBP14.63□□□□□ -0.07
TPM4-202ENST00000344824 CD58P19256 250 aa14.63□□□□□ -0.07
TPM4-202ENST00000344824 VIPR2P41587 438 aa14.63□□□□□ -0.07
TPM4-202ENST00000344824 VCPP55072 806 aaKnown RBP14.63□□□□□ -0.07
TPM4-202ENST00000344824 FIGNQ5HY92 759 aa14.63□□□□□ -0.07
TPM4-202ENST00000344824 FAM171BQ6P995 826 aa14.63□□□□□ -0.07
TPM4-202ENST00000344824 TTC16Q8NEE8 873 aa14.63□□□□□ -0.07
TPM4-202ENST00000344824 ZNF397Q8NF99 534 aaPredicted RBP14.63□□□□□ -0.07
TPM4-202ENST00000344824 MYCBPAPQ8TBZ2 947 aa14.63□□□□□ -0.07
TPM4-202ENST00000344824 TAF4BQ92750 862 aa14.63□□□□□ -0.07
TPM4-202ENST00000344824 SMARCD2Q92925 531 aa14.63□□□□□ -0.07
TPM4-202ENST00000344824 ASB16Q96NS5 453 aa14.63□□□□□ -0.07
TPM4-202ENST00000344824 SPAG5Q96R06 1193 aa14.63□□□□□ -0.07
TPM4-202ENST00000344824 PLA2G2FQ9BZM2 168 aa14.63□□□□□ -0.07
TPM4-202ENST00000344824 VRTNQ9H8Y1 702 aa14.63□□□□□ -0.07
TPM4-202ENST00000344824 HMGXB4Q9UGU5 601 aa14.63□□□□□ -0.07
TPM4-202ENST00000344824 ATP8B3O60423 1300 aa14.63□□□□□ -0.07
TPM4-202ENST00000344824 LRRC53A6NM62 1247 aa14.62□□□□□ -0.07
TPM4-202ENST00000344824 CLDN5O00501 218 aa14.62□□□□□ -0.07
TPM4-202ENST00000344824 ECI2O75521 394 aa14.62□□□□□ -0.07
TPM4-202ENST00000344824 MICAL2O94851 1124 aa14.62□□□□□ -0.07
TPM4-202ENST00000344824 PNMA6AP0CW24 399 aaPredicted RBP14.62□□□□□ -0.07
TPM4-202ENST00000344824 FCARP24071 287 aa14.62□□□□□ -0.07
TPM4-202ENST00000344824 ASPAP45381 313 aa14.62□□□□□ -0.07
TPM4-202ENST00000344824 GSDMDP57764 484 aa14.62□□□□□ -0.07
TPM4-202ENST00000344824 ZBED6P86452 979 aa14.62□□□□□ -0.07
TPM4-202ENST00000344824 BMP8AQ7Z5Y6 402 aa14.62□□□□□ -0.07
TPM4-202ENST00000344824 CNGA4Q8IV77 575 aa14.62□□□□□ -0.07
TPM4-202ENST00000344824 TC2NQ8N9U0 490 aa14.62□□□□□ -0.07
TPM4-202ENST00000344824 BAP1Q92560 729 aa14.62□□□□□ -0.07
TPM4-202ENST00000344824 IQCDQ96DY2 449 aa14.62□□□□□ -0.07
TPM4-202ENST00000344824 TNIP3Q96KP6 325 aa14.62□□□□□ -0.07
TPM4-202ENST00000344824 ARID3AQ99856 593 aa14.62□□□□□ -0.07
TPM4-202ENST00000344824 ZNF518BQ9C0D4 1074 aa14.62□□□□□ -0.07
TPM4-202ENST00000344824 GPR88Q9GZN0 384 aa14.62□□□□□ -0.07
TPM4-202ENST00000344824 NIF3L1Q9GZT8 377 aa14.62□□□□□ -0.07
TPM4-202ENST00000344824 BRD9Q9H8M2 597 aa14.62□□□□□ -0.07
TPM4-202ENST00000344824 TRPC7Q9HCX4 862 aa14.62□□□□□ -0.07
TPM4-202ENST00000344824 ARHGEF3Q9NR81 526 aa14.62□□□□□ -0.07
TPM4-202ENST00000344824 COL4A2P08572 1712 aa14.62□□□□□ -0.07
TPM4-202ENST00000344824 A0A1W2PQJ5 194 aa14.61□□□□□ -0.07
TPM4-202ENST00000344824 F8VP50 259 aa14.61□□□□□ -0.07
TPM4-202ENST00000344824 TRIM66O15016 1216 aa14.61□□□□□ -0.07
TPM4-202ENST00000344824 USP8P40818 1118 aa14.61□□□□□ -0.07
TPM4-202ENST00000344824 MAGEA11P43364 429 aa14.61□□□□□ -0.07
TPM4-202ENST00000344824 NDST1P52848 882 aa14.61□□□□□ -0.07
TPM4-202ENST00000344824 MFAP3P55082 362 aa14.61□□□□□ -0.07
TPM4-202ENST00000344824 ARID5AQ03989 594 aa14.61□□□□□ -0.07
TPM4-202ENST00000344824 DRAP1Q14919 205 aaPredicted RBP14.61□□□□□ -0.07
TPM4-202ENST00000344824 ACOT1Q86TX2 421 aa14.61□□□□□ -0.07
TPM4-202ENST00000344824 FAM35AQ86V20 835 aa14.61□□□□□ -0.07
TPM4-202ENST00000344824 YAF2Q8IY57 180 aa14.61□□□□□ -0.07
TPM4-202ENST00000344824 MAB21L3Q8N8X9 362 aa14.61□□□□□ -0.07
TPM4-202ENST00000344824 MRPS31Q92665 395 aaKnown RBP14.61□□□□□ -0.07
TPM4-202ENST00000344824 ELSPBP1Q96BH3 223 aa14.61□□□□□ -0.07
TPM4-202ENST00000344824 KREMEN1Q96MU8 473 aa14.61□□□□□ -0.07
TPM4-202ENST00000344824 ZNF830Q96NB3 372 aaPredicted RBP14.61□□□□□ -0.07
TPM4-202ENST00000344824 ELOVL4Q9GZR5 314 aa14.61□□□□□ -0.07
TPM4-202ENST00000344824 SMG9Q9H0W8 520 aaKnown RBP14.61□□□□□ -0.07
TPM4-202ENST00000344824 IL21Q9HBE4 155 aa14.61□□□□□ -0.07
TPM4-202ENST00000344824 ABHD10Q9NUJ1 306 aa14.61□□□□□ -0.07
TPM4-202ENST00000344824 FAM49BQ9NUQ9 324 aa14.61□□□□□ -0.07
TPM4-202ENST00000344824 UXTQ9UBK9 157 aaPredicted RBP14.61□□□□□ -0.07
TPM4-202ENST00000344824 KRBA1A5PL33 1030 aa14.6□□□□□ -0.07
TPM4-202ENST00000344824 HEPACAM2A8MVW5 462 aa14.6□□□□□ -0.07
TPM4-202ENST00000344824 NCANO14594 1321 aa14.6□□□□□ -0.07
TPM4-202ENST00000344824 CCDC130P13994 396 aa14.6□□□□□ -0.07
TPM4-202ENST00000344824 HMGA1P17096 107 aaKnown RBP14.6□□□□□ -0.07
TPM4-202ENST00000344824 ADORA2BP29275 332 aa14.6□□□□□ -0.07
TPM4-202ENST00000344824 GDI1P31150 447 aa14.6□□□□□ -0.07
TPM4-202ENST00000344824 AVPR1AP37288 418 aa14.6□□□□□ -0.07
TPM4-202ENST00000344824 CUL2Q13617 745 aa14.6□□□□□ -0.07
TPM4-202ENST00000344824 TSR1Q2NL82 804 aaKnown RBP14.6□□□□□ -0.07
TPM4-202ENST00000344824 VSTM1Q6UX27 236 aa14.6□□□□□ -0.07
TPM4-202ENST00000344824 VITQ6UXI7 678 aa14.6□□□□□ -0.07
TPM4-202ENST00000344824 DENND5BQ6ZUT9 1274 aa14.6□□□□□ -0.07
TPM4-202ENST00000344824 ARID3BQ8IVW6 561 aaPredicted RBP14.6□□□□□ -0.07
TPM4-202ENST00000344824 JAKMIP2Q96AA8 810 aa14.6□□□□□ -0.07
TPM4-202ENST00000344824 NAA15Q9BXJ9 866 aaKnown RBP14.6□□□□□ -0.07
TPM4-202ENST00000344824 B3GNT5Q9BYG0 378 aa14.6□□□□□ -0.07
TPM4-202ENST00000344824 EDEM3Q9BZQ6 932 aa14.6□□□□□ -0.07
TPM4-202ENST00000344824 TBC1D17Q9HA65 648 aa14.6□□□□□ -0.07
TPM4-202ENST00000344824 SLC2A4RGQ9NR83 387 aa14.6□□□□□ -0.07
TPM4-202ENST00000344824 KRT82Q9NSB4 513 aa14.6□□□□□ -0.07
TPM4-202ENST00000344824 WNT16Q9UBV4 365 aa14.6□□□□□ -0.07
TPM4-202ENST00000344824 WDFY4Q6ZS81 3184 aa14.59□□□□□ -0.07
TPM4-202ENST00000344824 GFPT2O94808 682 aa14.59□□□□□ -0.07
TPM4-202ENST00000344824 PRAMEF12O95522 483 aa14.59□□□□□ -0.07
TPM4-202ENST00000344824 FAM163BP0C2L3 166 aa14.59□□□□□ -0.07
TPM4-202ENST00000344824 KRT5P13647 590 aa14.59□□□□□ -0.07
TPM4-202ENST00000344824 PFKPQ01813 784 aa14.59□□□□□ -0.07
TPM4-202ENST00000344824 ASIC2Q16515 512 aa14.59□□□□□ -0.07
TPM4-202ENST00000344824 ZNF394Q53GI3 561 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms