RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 FAM193BQ96PV7 902 aaPredicted RBP13.7□□□□□ -0.22
COL18A1-201ENST00000342220 ASIC3Q9UHC3 531 aa13.7□□□□□ -0.22
COL18A1-201ENST00000342220 C2CD2LO14523 706 aa13.7□□□□□ -0.22
COL18A1-201ENST00000342220 PPFIA2O75334 1257 aa13.7□□□□□ -0.22
COL18A1-201ENST00000342220 GZMAP12544 262 aa13.7□□□□□ -0.22
COL18A1-201ENST00000342220 GATMP50440 423 aa13.7□□□□□ -0.22
COL18A1-201ENST00000342220 TAS2R40P59535 323 aa13.7□□□□□ -0.22
COL18A1-201ENST00000342220 RAB6CQ53S08 254 aa13.7□□□□□ -0.22
COL18A1-201ENST00000342220 C9orf57Q5W0N0 161 aa13.7□□□□□ -0.22
COL18A1-201ENST00000342220 TXNRD3NBQ6F5E7 133 aa13.7□□□□□ -0.22
COL18A1-201ENST00000342220 CAPRIN2Q6IMN6 1127 aaKnown RBP13.7□□□□□ -0.22
COL18A1-201ENST00000342220 TLDC1Q6P9B6 456 aa13.7□□□□□ -0.22
COL18A1-201ENST00000342220 SNX27Q96L92 541 aa13.7□□□□□ -0.22
COL18A1-201ENST00000342220 RAB6CQ9H0N0 254 aa13.7□□□□□ -0.22
COL18A1-201ENST00000342220 TSPYL2Q9H2G4 693 aaPredicted RBP13.7□□□□□ -0.22
COL18A1-201ENST00000342220 ZDHHC18Q9NUE0 388 aa13.7□□□□□ -0.22
COL18A1-201ENST00000342220 NUDT5Q9UKK9 219 aa13.7□□□□□ -0.22
COL18A1-201ENST00000342220 LOXHD1Q8IVV2 1947 aa13.7□□□□□ -0.22
COL18A1-201ENST00000342220 SRRM3A6NNA2 597 aaPredicted RBP13.69□□□□□ -0.22
COL18A1-201ENST00000342220 MGEA5O60502 916 aa13.69□□□□□ -0.22
COL18A1-201ENST00000342220 TAF6P49848 677 aa13.69□□□□□ -0.22
COL18A1-201ENST00000342220 MAMLD1Q13495 774 aa13.69□□□□□ -0.22
COL18A1-201ENST00000342220 SCN4BQ8IWT1 228 aa13.69□□□□□ -0.22
COL18A1-201ENST00000342220 ADGRF2Q8IZF7 708 aa13.69□□□□□ -0.22
COL18A1-201ENST00000342220 LINC01465Q8N7H1 131 aa13.69□□□□□ -0.22
COL18A1-201ENST00000342220 CLEC4CQ8WTT0 213 aa13.69□□□□□ -0.22
COL18A1-201ENST00000342220 TXLNGYQ9BZA5 131 aa13.69□□□□□ -0.22
COL18A1-201ENST00000342220 MRPL47Q9HD33 250 aaKnown RBP13.69□□□□□ -0.22
COL18A1-201ENST00000342220 HAUS2Q9NVX0 235 aa13.69□□□□□ -0.22
COL18A1-201ENST00000342220 HCSTQ9UBK5 93 aa13.69□□□□□ -0.22
COL18A1-201ENST00000342220 GOLGA6L7A0A1B0GV03 622 aa13.69□□□□□ -0.22
COL18A1-201ENST00000342220 MBLAC1A4D2B0 266 aaPredicted RBP13.69□□□□□ -0.22
COL18A1-201ENST00000342220 MED7O43513 233 aa13.69□□□□□ -0.22
COL18A1-201ENST00000342220 ADAMTS4O75173 837 aa13.69□□□□□ -0.22
COL18A1-201ENST00000342220 OR4Q2P0C623 313 aa13.69□□□□□ -0.22
COL18A1-201ENST00000342220 RALAP11233 206 aa13.69□□□□□ -0.22
COL18A1-201ENST00000342220 RAB27AP51159 221 aa13.69□□□□□ -0.22
COL18A1-201ENST00000342220 SPRED3Q2MJR0 410 aa13.69□□□□□ -0.22
COL18A1-201ENST00000342220 TBC1D25Q3MII6 688 aa13.69□□□□□ -0.22
COL18A1-201ENST00000342220 MDH1BQ5I0G3 518 aa13.69□□□□□ -0.22
COL18A1-201ENST00000342220 UBAP2Q5T6F2 1119 aaKnown RBP13.69□□□□□ -0.22
COL18A1-201ENST00000342220 JAMLQ86YT9 394 aa13.69□□□□□ -0.22
COL18A1-201ENST00000342220 SMG8Q8ND04 991 aaKnown RBP13.69□□□□□ -0.22
COL18A1-201ENST00000342220 EPB41L4BQ9H329 900 aa13.69□□□□□ -0.22
COL18A1-201ENST00000342220 PARVAQ9NVD7 372 aa13.69□□□□□ -0.22
COL18A1-201ENST00000342220 CYTH4Q9UIA0 394 aa13.69□□□□□ -0.22
COL18A1-201ENST00000342220 BARX2Q9UMQ3 279 aaPredicted RBP13.69□□□□□ -0.22
COL18A1-201ENST00000342220 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.69□□□□□ -0.22
COL18A1-201ENST00000342220 GPR182O15218 404 aa13.69□□□□□ -0.22
COL18A1-201ENST00000342220 PDGFRAP16234 1089 aa13.69□□□□□ -0.22
COL18A1-201ENST00000342220 FEZF2Q8TBJ5 459 aa13.69□□□□□ -0.22
COL18A1-201ENST00000342220 FBXO25Q8TCJ0 367 aa13.69□□□□□ -0.22
COL18A1-201ENST00000342220 ITGA11Q9UKX5 1188 aa13.69□□□□□ -0.22
COL18A1-201ENST00000342220 TLDC2A0PJX2 215 aa13.68□□□□□ -0.22
COL18A1-201ENST00000342220 ARL5CA6NH57 179 aa13.68□□□□□ -0.22
COL18A1-201ENST00000342220 XPOTO43592 962 aaKnown RBP13.68□□□□□ -0.22
COL18A1-201ENST00000342220 UNGP13051 313 aaPredicted RBP13.68□□□□□ -0.22
COL18A1-201ENST00000342220 MAP3K7CLP57077 242 aa13.68□□□□□ -0.22
COL18A1-201ENST00000342220 NME3Q13232 169 aa13.68□□□□□ -0.22
COL18A1-201ENST00000342220 SDHAF4Q5VUM1 108 aa13.68□□□□□ -0.22
COL18A1-201ENST00000342220 SEC16BQ96JE7 1060 aa13.68□□□□□ -0.22
COL18A1-201ENST00000342220 NAP1L3Q99457 506 aaPredicted RBP13.68□□□□□ -0.22
COL18A1-201ENST00000342220 ERBB2P04626 1255 aa13.68□□□□□ -0.22
COL18A1-201ENST00000342220 PMS2P54278 862 aa13.68□□□□□ -0.22
COL18A1-201ENST00000342220 SLC8A3P57103 927 aa13.68□□□□□ -0.22
COL18A1-201ENST00000342220 PDCD2Q16342 344 aaPredicted RBP13.68□□□□□ -0.22
COL18A1-201ENST00000342220 SOWAHAQ2M3V2 549 aa13.68□□□□□ -0.22
COL18A1-201ENST00000342220 CCDC121Q6ZUS5 278 aa13.68□□□□□ -0.22
COL18A1-201ENST00000342220 CFAP57Q96MR6 1250 aa13.68□□□□□ -0.22
COL18A1-201ENST00000342220 DDX43Q9NXZ2 648 aaKnown RBP13.68□□□□□ -0.22
COL18A1-201ENST00000342220 PLXNB2O15031 1838 aa13.68□□□□□ -0.22
COL18A1-201ENST00000342220 HAS3O00219 553 aa13.68□□□□□ -0.22
COL18A1-201ENST00000342220 CAPN9O14815 690 aa13.68□□□□□ -0.22
COL18A1-201ENST00000342220 RNF8O76064 485 aa13.68□□□□□ -0.22
COL18A1-201ENST00000342220 RANBP1P43487 201 aa13.68□□□□□ -0.22
COL18A1-201ENST00000342220 SF3A3Q12874 501 aaKnown RBP eCLIP13.68□□□□□ -0.224e-7■■■■■ 29.1
COL18A1-201ENST00000342220 SMAD1Q15797 465 aaKnown RBP13.68□□□□□ -0.22
COL18A1-201ENST00000342220 ZDHHC24Q6UX98 284 aa13.68□□□□□ -0.22
COL18A1-201ENST00000342220 ZDHHC14Q8IZN3 488 aa13.68□□□□□ -0.22
COL18A1-201ENST00000342220 DBF4BQ8NFT6 615 aa13.68□□□□□ -0.22
COL18A1-201ENST00000342220 GPR152Q8TDT2 470 aa13.68□□□□□ -0.22
COL18A1-201ENST00000342220 TLCD1Q96CP7 247 aa13.68□□□□□ -0.22
COL18A1-201ENST00000342220 SENP8Q96LD8 212 aa13.68□□□□□ -0.22
COL18A1-201ENST00000342220 RSAD1Q9HA92 442 aa13.68□□□□□ -0.22
COL18A1-201ENST00000342220 LRFN2Q9ULH4 789 aa13.68□□□□□ -0.22
COL18A1-201ENST00000342220 CILPO75339 1184 aa13.67□□□□□ -0.22
COL18A1-201ENST00000342220 ATXN1P54253 815 aaKnown RBP13.67□□□□□ -0.22
COL18A1-201ENST00000342220 LILRA4P59901 499 aa13.67□□□□□ -0.22
COL18A1-201ENST00000342220 BYSLQ13895 437 aaKnown RBP13.67□□□□□ -0.22
COL18A1-201ENST00000342220 PMF1Q6P1K2 205 aa13.67□□□□□ -0.22
COL18A1-201ENST00000342220 WDTC1Q8N5D0 677 aa13.67□□□□□ -0.22
COL18A1-201ENST00000342220 LRRC4Q9HBW1 653 aa13.67□□□□□ -0.22
COL18A1-201ENST00000342220 GGA2Q9UJY4 613 aa13.67□□□□□ -0.22
COL18A1-201ENST00000342220 MTUS1Q9ULD2 1270 aa13.67□□□□□ -0.22
COL18A1-201ENST00000342220 ZNF148Q9UQR1 794 aa13.67□□□□□ -0.22
COL18A1-201ENST00000342220 C2CD2Q9Y426 696 aa13.67□□□□□ -0.22
COL18A1-201ENST00000342220 A0A1W2PQ45 241 aaPredicted RBP13.67□□□□□ -0.22
COL18A1-201ENST00000342220 A0A1W2PQY0 241 aa13.67□□□□□ -0.22
COL18A1-201ENST00000342220 PAEPP09466 180 aa13.67□□□□□ -0.22
COL18A1-201ENST00000342220 MYBL1P10243 752 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms