RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 TUFMP49411 452 aaKnown RBP12.36□□□□□ -0.43
RTN3-203ENST00000341307 PPP2R5EQ16537 467 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 TMCO4Q5TGY1 634 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 DCAF15Q66K64 600 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 ADGRG6Q86SQ4 1221 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 TTC30AQ86WT1 665 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 ANKRD36BP1Q96IX9 119 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 ZFRQ96KR1 1074 aaKnown RBP12.36□□□□□ -0.43
RTN3-203ENST00000341307 LXNQ9BS40 222 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 TEKT3Q9BXF9 490 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 MRPL1Q9BYD6 325 aaKnown RBP12.36□□□□□ -0.43
RTN3-203ENST00000341307 MRPS26Q9BYN8 205 aaKnown RBP12.36□□□□□ -0.43
RTN3-203ENST00000341307 OSBPL6Q9BZF3 934 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 SLC7A5P2Q9GIP4 190 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 PARP2Q9UGN5 583 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 LGALS13Q9UHV8 139 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 NEU2Q9Y3R4 380 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 ANKRD34BA5PLL1 514 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 TMEM150BA6NC51 233 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 TRIM64CA6NLI5 447 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 SOBPA7XYQ1 873 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 K7EPI3 171 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 DNAJC6O75061 913 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 TBCAO75347 108 aaKnown RBP12.36□□□□□ -0.43
RTN3-203ENST00000341307 FGFR1OPO95684 399 aaKnown RBP12.36□□□□□ -0.43
RTN3-203ENST00000341307 NR2F2P24468 414 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 NMT1P30419 496 aaKnown RBP12.36□□□□□ -0.43
RTN3-203ENST00000341307 RPS3AP61247 264 aaKnown RBP12.36□□□□□ -0.43
RTN3-203ENST00000341307 PDK4Q16654 411 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 TTC27Q6P3X3 843 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 TMC7Q7Z402 723 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 DHDDSQ86SQ9 333 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 RAVER1Q8IY67 606 aaKnown RBP12.36□□□□□ -0.43
RTN3-203ENST00000341307 DDHD1Q8NEL9 900 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 RFWD2Q8NHY2 731 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 FBXO27Q8NI29 283 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 ACTRT2Q8TDY3 377 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 CLPTM1LQ96KA5 538 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 TUBB6Q9BUF5 446 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 GPAMQ9HCL2 828 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 TUFT1Q9NNX1 390 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 NAALADL1Q9UQQ1 740 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 SNX9Q9Y5X1 595 aa12.36□□□□□ -0.43
RTN3-203ENST00000341307 DOCK1Q14185 1865 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 SSC5DA1L4H1 1573 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 TXNDC9O14530 226 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 SLC26A4O43511 780 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 SPAG7O75391 227 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 PEX2P28328 305 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 CETN2P41208 172 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 KCNC4Q03721 635 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 PTK2Q05397 1052 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 EFTUD2Q15029 972 aaKnown RBP eCLIP12.35□□□□□ -0.433e-9■■■■□ 23.3
RTN3-203ENST00000341307 PGM5Q15124 567 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 TLR1Q15399 786 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 TRMT5Q32P41 509 aaKnown RBP12.35□□□□□ -0.43
RTN3-203ENST00000341307 TKFCQ3LXA3 575 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 PPP2R2DQ66LE6 453 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 DCLRE1AQ6PJP8 1040 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 RNF207Q6ZRF8 634 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 C1orf186Q6ZWK4 172 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 ZNF571Q7Z3V5 609 aaPredicted RBP12.35□□□□□ -0.43
RTN3-203ENST00000341307 MCF2L2Q86YR7 1114 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 MYCT1Q8N699 235 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 TRPC4APQ8TEL6 797 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 PTCD2Q8WV60 388 aaKnown RBP12.35□□□□□ -0.43
RTN3-203ENST00000341307 KLRG1Q96E93 195 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 BIRC8Q96P09 236 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 LSM14BQ9BX40 385 aaKnown RBP12.35□□□□□ -0.43
RTN3-203ENST00000341307 MAK16Q9BXY0 300 aaKnown RBP12.35□□□□□ -0.43
RTN3-203ENST00000341307 VTA1Q9NP79 307 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 RRN3Q9NYV6 651 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 PLK2Q9NYY3 685 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 ZNF112Q9UJU3 913 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 MYOCOSA0A1B0GUC4 107 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 CLIC2O15247 247 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 TP73O15350 636 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 DHX15O43143 795 aaKnown RBP12.35□□□□□ -0.43
RTN3-203ENST00000341307 ZBED4O75132 1171 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 CNOT3O75175 753 aaKnown RBP12.35□□□□□ -0.43
RTN3-203ENST00000341307 KRT13P13646 458 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 PTPN2P17706 415 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 CDH3P22223 829 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 PON1P27169 355 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 PHBP35232 272 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 RPL26P61254 145 aaKnown RBP12.35□□□□□ -0.43
RTN3-203ENST00000341307 FOLH1Q04609 750 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 ZNF211Q13398 564 aaPredicted RBP12.35□□□□□ -0.43
RTN3-203ENST00000341307 MTMR1Q13613 665 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 APOFQ13790 326 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 BAATQ14032 418 aaPredicted RBP12.35□□□□□ -0.43
RTN3-203ENST00000341307 KNOP1Q1ED39 458 aaKnown RBP12.35□□□□□ -0.43
RTN3-203ENST00000341307 C10orf76Q5T2E6 689 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 B3GNT9Q6UX72 402 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 APOBEC3FQ8IUX4 373 aaKnown RBP12.35□□□□□ -0.43
RTN3-203ENST00000341307 CENPSQ8N2Z9 138 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 SLC25A41Q8N5S1 370 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 ZNF398Q8TD17 642 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 USP6NLQ92738 828 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 SKA1Q96BD8 255 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms