RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 DCAKDQ8WVC6 231 aa15.22■□□□□ 0.03
TDP2-201ENST00000341060 COPS5Q92905 334 aa15.22■□□□□ 0.03
TDP2-201ENST00000341060 ERP27Q96DN0 273 aa15.22■□□□□ 0.03
TDP2-201ENST00000341060 TBC1D31Q96DN5 1066 aa15.22■□□□□ 0.03
TDP2-201ENST00000341060 LRRC37BQ96QE4 947 aa15.22■□□□□ 0.03
TDP2-201ENST00000341060 PEBP4Q96S96 227 aa15.22■□□□□ 0.03
TDP2-201ENST00000341060 NCAPGQ9BPX3 1015 aa15.22■□□□□ 0.03
TDP2-201ENST00000341060 ADPGKQ9BRR6 497 aa15.22■□□□□ 0.03
TDP2-201ENST00000341060 MYLK2Q9H1R3 596 aa15.22■□□□□ 0.03
TDP2-201ENST00000341060 TXNRD2Q9NNW7 524 aa15.22■□□□□ 0.03
TDP2-201ENST00000341060 TXLNGQ9NUQ3 528 aa15.22■□□□□ 0.03
TDP2-201ENST00000341060 CHKBQ9Y259 395 aa15.22■□□□□ 0.03
TDP2-201ENST00000341060 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.22■□□□□ 0.03
TDP2-201ENST00000341060 TM9SF1O15321 606 aa15.22■□□□□ 0.03
TDP2-201ENST00000341060 DCTN3O75935 186 aa15.22■□□□□ 0.03
TDP2-201ENST00000341060 TXNP10599 105 aaKnown RBP15.22■□□□□ 0.03
TDP2-201ENST00000341060 FGFR1P11362 822 aa15.22■□□□□ 0.03
TDP2-201ENST00000341060 ATP2A2P16615 1042 aaKnown RBP15.22■□□□□ 0.03
TDP2-201ENST00000341060 STIP1P31948 543 aaKnown RBP15.22■□□□□ 0.03
TDP2-201ENST00000341060 GBP2P32456 591 aaPredicted RBP15.22■□□□□ 0.03
TDP2-201ENST00000341060 MSH2P43246 934 aa15.22■□□□□ 0.03
TDP2-201ENST00000341060 INCA1Q0VD86 236 aa15.22■□□□□ 0.03
TDP2-201ENST00000341060 NOMO1Q15155 1222 aa15.22■□□□□ 0.03
TDP2-201ENST00000341060 BBS9Q3SYG4 887 aa15.22■□□□□ 0.03
TDP2-201ENST00000341060 CYP4V2Q6ZWL3 525 aaPredicted RBP15.22■□□□□ 0.03
TDP2-201ENST00000341060 PALM2Q8IXS6 379 aa15.22■□□□□ 0.03
TDP2-201ENST00000341060 C10orf82Q8WW14 230 aa15.22■□□□□ 0.03
TDP2-201ENST00000341060 ALKBH8Q96BT7 664 aaKnown RBP15.22■□□□□ 0.03
TDP2-201ENST00000341060 ERAP1Q9NZ08 941 aa15.22■□□□□ 0.03
TDP2-201ENST00000341060 TRIM33Q9UPN9 1127 aa15.22■□□□□ 0.03
TDP2-201ENST00000341060 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.22■□□□□ 0.03
TDP2-201ENST00000341060 ATP5HO75947 161 aa15.21■□□□□ 0.03
TDP2-201ENST00000341060 ALDH3A1P30838 453 aa15.21■□□□□ 0.03
TDP2-201ENST00000341060 ROR1Q01973 937 aa15.21■□□□□ 0.03
TDP2-201ENST00000341060 KCTD2Q14681 263 aa15.21■□□□□ 0.03
TDP2-201ENST00000341060 AMHR2Q16671 573 aa15.21■□□□□ 0.03
TDP2-201ENST00000341060 IFNLR1Q8IU57 520 aaPredicted RBP15.21■□□□□ 0.03
TDP2-201ENST00000341060 TAB3Q8N5C8 712 aaPredicted RBP15.21■□□□□ 0.03
TDP2-201ENST00000341060 THOC1Q96FV9 657 aaKnown RBP15.21■□□□□ 0.03
TDP2-201ENST00000341060 OTUD5Q96G74 571 aa15.21■□□□□ 0.03
TDP2-201ENST00000341060 CNPY3Q9BT09 278 aa15.21■□□□□ 0.03
TDP2-201ENST00000341060 RNPEPQ9H4A4 650 aa15.21■□□□□ 0.03
TDP2-201ENST00000341060 PDZD7Q9H5P4 517 aa15.21■□□□□ 0.03
TDP2-201ENST00000341060 FAM124BQ9H5Z6 455 aaPredicted RBP15.21■□□□□ 0.03
TDP2-201ENST00000341060 EBF2Q9HAK2 575 aa15.21■□□□□ 0.03
TDP2-201ENST00000341060 ETNK1Q9HBU6 452 aa15.21■□□□□ 0.03
TDP2-201ENST00000341060 CYLDQ9NQC7 956 aa15.21■□□□□ 0.03
TDP2-201ENST00000341060 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.21■□□□□ 0.03
TDP2-201ENST00000341060 C2CD4BA6NLJ0 364 aa15.2■□□□□ 0.02
TDP2-201ENST00000341060 GPD1P21695 349 aa15.2■□□□□ 0.02
TDP2-201ENST00000341060 ADRA1DP25100 572 aa15.2■□□□□ 0.02
TDP2-201ENST00000341060 CDH6P55285 790 aa15.2■□□□□ 0.02
TDP2-201ENST00000341060 FAM47CQ5HY64 1035 aa15.2■□□□□ 0.02
TDP2-201ENST00000341060 WDR78Q5VTH9 848 aa15.2■□□□□ 0.02
TDP2-201ENST00000341060 BANPQ8N9N5 519 aa15.2■□□□□ 0.02
TDP2-201ENST00000341060 AGAP11Q8TF27 550 aa15.2■□□□□ 0.02
TDP2-201ENST00000341060 ZNF75CPQ92670 426 aaPredicted RBP15.2■□□□□ 0.02
TDP2-201ENST00000341060 HPDLQ96IR7 371 aa15.2■□□□□ 0.02
TDP2-201ENST00000341060 HEXIM2Q96MH2 286 aaKnown RBP15.2■□□□□ 0.02
TDP2-201ENST00000341060 MMP19Q99542 508 aa15.2■□□□□ 0.02
TDP2-201ENST00000341060 ELP3Q9H9T3 547 aa15.2■□□□□ 0.02
TDP2-201ENST00000341060 BARX2Q9UMQ3 279 aaPredicted RBP15.2■□□□□ 0.02
TDP2-201ENST00000341060 PIAS1O75925 651 aa15.2■□□□□ 0.02
TDP2-201ENST00000341060 NRLP54845 237 aa15.2■□□□□ 0.02
TDP2-201ENST00000341060 MMRN1Q13201 1228 aa15.2■□□□□ 0.02
TDP2-201ENST00000341060 MTM1Q13496 603 aa15.2■□□□□ 0.02
TDP2-201ENST00000341060 TFDP2Q14188 446 aa15.2■□□□□ 0.02
TDP2-201ENST00000341060 KCNJ11Q14654 390 aa15.2■□□□□ 0.02
TDP2-201ENST00000341060 TTLL4Q14679 1199 aa15.2■□□□□ 0.02
TDP2-201ENST00000341060 Q3C1V9 767 aa15.2■□□□□ 0.02
TDP2-201ENST00000341060 SLC10A6Q3KNW5 377 aa15.2■□□□□ 0.02
TDP2-201ENST00000341060 SPDYAQ5MJ70 313 aa15.2■□□□□ 0.02
TDP2-201ENST00000341060 SH3PXD2AQ5TCZ1 1133 aa15.2■□□□□ 0.02
TDP2-201ENST00000341060 MAP1SQ66K74 1059 aaPredicted RBP15.2■□□□□ 0.02
TDP2-201ENST00000341060 TRNP1Q6NT89 227 aa15.2■□□□□ 0.02
TDP2-201ENST00000341060 OTOAQ7RTW8 1153 aa15.2■□□□□ 0.02
TDP2-201ENST00000341060 VSIG1Q86XK7 387 aa15.2■□□□□ 0.02
TDP2-201ENST00000341060 ZNF276Q8N554 614 aa15.2■□□□□ 0.02
TDP2-201ENST00000341060 TCP10LQ8TDR4 215 aa15.2■□□□□ 0.02
TDP2-201ENST00000341060 CYTH2Q99418 400 aa15.2■□□□□ 0.02
TDP2-201ENST00000341060 LRMDAQ9H2I8 198 aa15.2■□□□□ 0.02
TDP2-201ENST00000341060 RBPJLQ9UBG7 517 aa15.2■□□□□ 0.02
TDP2-201ENST00000341060 CHMP2BQ9UQN3 213 aa15.2■□□□□ 0.02
TDP2-201ENST00000341060 STK38LQ9Y2H1 464 aa15.2■□□□□ 0.02
TDP2-201ENST00000341060 A0A087WZ62 844 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 CSDE1O75534 798 aaKnown RBP15.19■□□□□ 0.02
TDP2-201ENST00000341060 IREB2P48200 963 aaKnown RBP15.19■□□□□ 0.02
TDP2-201ENST00000341060 TMEM132DQ14C87 1099 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 KYAT1Q16773 422 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 ZNF484Q5JVG2 852 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 DARS2Q6PI48 645 aaKnown RBP15.19■□□□□ 0.02
TDP2-201ENST00000341060 LCLAT1Q6UWP7 414 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 NPNTQ6UXI9 565 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 USP50Q70EL3 339 aaPredicted RBP15.19■□□□□ 0.02
TDP2-201ENST00000341060 ZC3H18Q86VM9 953 aaKnown RBP15.19■□□□□ 0.02
TDP2-201ENST00000341060 LINC01465Q8N7H1 131 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 UBA3Q8TBC4 463 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 ZNF398Q8TD17 642 aa15.19■□□□□ 0.02
TDP2-201ENST00000341060 RAB3IPQ96QF0 476 aaPredicted RBP15.19■□□□□ 0.02
TDP2-201ENST00000341060 FDXACB1Q9BRP7 624 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms