RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 PCGF5Q86SE9 256 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 SLC35B2Q8TB61 432 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 INPP5DQ92835 1189 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 BTBD10Q9BSF8 475 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 THTPAQ9BU02 230 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 ACSS3Q9H6R3 686 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 SMYD3Q9H7B4 428 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 PDLIM7Q9NR12 457 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 NMRK1Q9NWW6 199 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 MAGEB2O15479 319 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 ONECUT3O60422 494 aaPredicted RBP15.03■□□□□ -0
CPSF7-201ENST00000340437 CXCL8P10145 99 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 BLMHQ13867 455 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 STXBP2Q15833 593 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 LY6KQ17RY6 165 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 SGSM1Q2NKQ1 1148 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 C4orf50Q6ZRC1 276 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 FAM83AQ86UY5 434 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 FBXO27Q8NI29 283 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 DCAKDQ8WVC6 231 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 SCG3Q8WXD2 468 aaKnown RBP15.03■□□□□ -0
CPSF7-201ENST00000340437 SNCAIPQ9Y6H5 919 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 WASF2Q9Y6W5 498 aa15.03■□□□□ -0
CPSF7-201ENST00000340437 ZNFX1Q9P2E3 1918 aaKnown RBP15.02■□□□□ -0
CPSF7-201ENST00000340437 ARHGAP42A6NI28 874 aa15.02■□□□□ -0
CPSF7-201ENST00000340437 MEI4A8MW99 385 aa15.02■□□□□ -0
CPSF7-201ENST00000340437 GSC2O15499 205 aa15.02■□□□□ -0
CPSF7-201ENST00000340437 ERBB2P04626 1255 aa15.02■□□□□ -0
CPSF7-201ENST00000340437 PRKCBP05771 671 aa15.02■□□□□ -0
CPSF7-201ENST00000340437 GNAZP19086 355 aa15.02■□□□□ -0
CPSF7-201ENST00000340437 RXRBP28702 533 aa15.02■□□□□ -0
CPSF7-201ENST00000340437 PSEN1P49768 467 aa15.02■□□□□ -0
CPSF7-201ENST00000340437 CHI3L2Q15782 390 aa15.02■□□□□ -0
CPSF7-201ENST00000340437 CIAPIN1Q6FI81 312 aa15.02■□□□□ -0
CPSF7-201ENST00000340437 ADGRD1Q6QNK2 874 aa15.02■□□□□ -0
CPSF7-201ENST00000340437 BANPQ8N9N5 519 aa15.02■□□□□ -0
CPSF7-201ENST00000340437 SPDYE1Q8NFV5 336 aaPredicted RBP15.02■□□□□ -0
CPSF7-201ENST00000340437 FBXO41Q8TF61 875 aa15.02■□□□□ -0
CPSF7-201ENST00000340437 NKD2Q969F2 451 aaPredicted RBP15.02■□□□□ -0
CPSF7-201ENST00000340437 USP18Q9UMW8 372 aa15.02■□□□□ -0
CPSF7-201ENST00000340437 LTBP1Q14766 1721 aa15.02□□□□□ -0.01
CPSF7-201ENST00000340437 LGR5O75473 907 aa15.02□□□□□ -0.01
CPSF7-201ENST00000340437 POLE2P56282 527 aa15.02□□□□□ -0.01
CPSF7-201ENST00000340437 BACE1P56817 501 aa15.02□□□□□ -0.01
CPSF7-201ENST00000340437 RASA2Q15283 850 aa15.02□□□□□ -0.01
CPSF7-201ENST00000340437 ZNF667Q5HYK9 610 aa15.02□□□□□ -0.01
CPSF7-201ENST00000340437 NCAPG2Q86XI2 1143 aa15.02□□□□□ -0.01
CPSF7-201ENST00000340437 TDRPQ86YL5 185 aa15.02□□□□□ -0.01
CPSF7-201ENST00000340437 NAT8LQ8N9F0 302 aa15.02□□□□□ -0.01
CPSF7-201ENST00000340437 CCDC110Q8TBZ0 833 aa15.02□□□□□ -0.01
CPSF7-201ENST00000340437 SRPK1Q96SB4 655 aaKnown RBP15.02□□□□□ -0.01
CPSF7-201ENST00000340437 ACAD9Q9H845 621 aa15.02□□□□□ -0.01
CPSF7-201ENST00000340437 NRBP2Q9NSY0 501 aa15.02□□□□□ -0.01
CPSF7-201ENST00000340437 STOML1Q9UBI4 398 aa15.02□□□□□ -0.01
CPSF7-201ENST00000340437 LY75O60449 1722 aa15.02□□□□□ -0.01
CPSF7-201ENST00000340437 CXorf49A8MYA2 514 aaPredicted RBP15.02□□□□□ -0.01
CPSF7-201ENST00000340437 ITGBL1O95965 494 aaPredicted RBP15.02□□□□□ -0.01
CPSF7-201ENST00000340437 ZCCHC18P0CG32 403 aa15.02□□□□□ -0.01
CPSF7-201ENST00000340437 PDGFRAP16234 1089 aa15.02□□□□□ -0.01
CPSF7-201ENST00000340437 SERPINB4P48594 390 aa15.02□□□□□ -0.01
CPSF7-201ENST00000340437 RELL1Q8IUW5 271 aa15.02□□□□□ -0.01
CPSF7-201ENST00000340437 PPFIBP2Q8ND30 876 aa15.02□□□□□ -0.01
CPSF7-201ENST00000340437 TWNKQ96RR1 684 aa15.02□□□□□ -0.01
CPSF7-201ENST00000340437 DCLRE1BQ9H816 532 aa15.02□□□□□ -0.01
CPSF7-201ENST00000340437 TAS2R1Q9NYW7 299 aa15.02□□□□□ -0.01
CPSF7-201ENST00000340437 ZC3H7BQ9UGR2 993 aaKnown RBP15.02□□□□□ -0.01
CPSF7-201ENST00000340437 LINGO3P0C6S8 592 aa15.01□□□□□ -0.01
CPSF7-201ENST00000340437 RNF220Q5VTB9 566 aa15.01□□□□□ -0.01
CPSF7-201ENST00000340437 EEF1DP3Q658K8 133 aa15.01□□□□□ -0.01
CPSF7-201ENST00000340437 ISLR2Q6UXK2 745 aa15.01□□□□□ -0.01
CPSF7-201ENST00000340437 EFCAB3Q8N7B9 438 aa15.01□□□□□ -0.01
CPSF7-201ENST00000340437 ANKRD36BP1Q96IX9 119 aa15.01□□□□□ -0.01
CPSF7-201ENST00000340437 MIS12Q9H081 205 aa15.01□□□□□ -0.01
CPSF7-201ENST00000340437 NRXN2Q9P2S2 1712 aa15.01□□□□□ -0.01
CPSF7-201ENST00000340437 SYNJ2BP-COX16A0A087WUM0 186 aa15.01□□□□□ -0.01
CPSF7-201ENST00000340437 AMPD1P23109 780 aa15.01□□□□□ -0.01
CPSF7-201ENST00000340437 TCF7P36402 384 aaPredicted RBP15.01□□□□□ -0.01
CPSF7-201ENST00000340437 CRADDP78560 199 aa15.01□□□□□ -0.01
CPSF7-201ENST00000340437 ZC3H12AQ5D1E8 599 aaKnown RBP15.01□□□□□ -0.01
CPSF7-201ENST00000340437 C16orf46Q6P387 395 aa15.01□□□□□ -0.01
CPSF7-201ENST00000340437 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.01□□□□□ -0.01
CPSF7-201ENST00000340437 RDM1Q8NG50 284 aa15.01□□□□□ -0.01
CPSF7-201ENST00000340437 SYT15Q9BQS2 421 aa15.01□□□□□ -0.01
CPSF7-201ENST00000340437 MRPL4Q9BYD3 311 aaKnown RBP15.01□□□□□ -0.01
CPSF7-201ENST00000340437 COX16Q9P0S2 106 aa15.01□□□□□ -0.01
CPSF7-201ENST00000340437 HACL1Q9UJ83 578 aa15.01□□□□□ -0.01
CPSF7-201ENST00000340437 NOP56O00567 594 aaKnown RBP15.01□□□□□ -0.01
CPSF7-201ENST00000340437 ADCY3O60266 1144 aa15.01□□□□□ -0.01
CPSF7-201ENST00000340437 ITGB3P05106 788 aa15.01□□□□□ -0.01
CPSF7-201ENST00000340437 F7P08709 466 aaPredicted RBP15.01□□□□□ -0.01
CPSF7-201ENST00000340437 YWHAEP62258 255 aaKnown RBP15.01□□□□□ -0.01
CPSF7-201ENST00000340437 KLC1Q07866 573 aa15.01□□□□□ -0.01
CPSF7-201ENST00000340437 NUDCD3Q8IVD9 361 aa15.01□□□□□ -0.01
CPSF7-201ENST00000340437 BRSK2Q8IWQ3 736 aa15.01□□□□□ -0.01
CPSF7-201ENST00000340437 RTKN2Q8IZC4 609 aa15.01□□□□□ -0.01
CPSF7-201ENST00000340437 ZNF280CQ8ND82 737 aa15.01□□□□□ -0.01
CPSF7-201ENST00000340437 TMEM174Q8WUU8 243 aa15.01□□□□□ -0.01
CPSF7-201ENST00000340437 OXNAD1Q96HP4 312 aaPredicted RBP15.01□□□□□ -0.01
CPSF7-201ENST00000340437 PIWIL1Q96J94 861 aaKnown RBP15.01□□□□□ -0.01
CPSF7-201ENST00000340437 CDHR1Q96JP9 859 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms