RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 B4GALT4O60513 344 aa12.33□□□□□ -0.43
HDAC6-201ENST00000334136 CDR2Q01850 454 aa12.33□□□□□ -0.43
HDAC6-201ENST00000334136 MGAT5BQ3V5L5 792 aa12.33□□□□□ -0.43
HDAC6-201ENST00000334136 NXNQ6DKJ4 435 aa12.33□□□□□ -0.43
HDAC6-201ENST00000334136 FAM228AQ86W67 206 aa12.33□□□□□ -0.43
HDAC6-201ENST00000334136 FBXO25Q8TCJ0 367 aa12.33□□□□□ -0.43
HDAC6-201ENST00000334136 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.33□□□□□ -0.43
HDAC6-201ENST00000334136 C2CD2Q9Y426 696 aa12.33□□□□□ -0.43
HDAC6-201ENST00000334136 KPNA7A9QM74 516 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 ATMINO43313 823 aaPredicted RBP12.33□□□□□ -0.44
HDAC6-201ENST00000334136 ANP32DO95626 131 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 AGTP01019 485 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 CALB1P05937 261 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 PRLRP16471 622 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 PSMC1P62191 440 aaKnown RBP12.33□□□□□ -0.44
HDAC6-201ENST00000334136 MAPRE1Q15691 268 aaKnown RBP12.33□□□□□ -0.44
HDAC6-201ENST00000334136 AGBL2Q5U5Z8 902 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 SLC39A5Q6ZMH5 540 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 ACOT1Q86TX2 421 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 C4orf33Q8N1A6 199 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 FIBCD1Q8N539 461 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 PPP4R1Q8TF05 950 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 ZFP42Q96MM3 310 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 ZNF558Q96NG5 402 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 SEPT5Q99719 369 aaPredicted RBP12.33□□□□□ -0.44
HDAC6-201ENST00000334136 YY1AP1Q9H869 796 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 CYP3A43Q9HB55 503 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 TMBIM4Q9HC24 238 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 ENTPD7Q9NQZ7 604 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 TLL1O43897 1013 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 CDC25CP30307 473 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 DHX34Q14147 1143 aaKnown RBP12.33□□□□□ -0.44
HDAC6-201ENST00000334136 GRAMD1BQ3KR37 738 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 TMCO4Q5TGY1 634 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 OVOS1Q6IE37 1185 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 WDR59Q6PJI9 974 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 SLC30A5Q8TAD4 765 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 ABTB1Q969K4 478 aaPredicted RBP12.33□□□□□ -0.44
HDAC6-201ENST00000334136 ELMO3Q96BJ8 720 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 TRIM55Q9BYV6 548 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 NGRNQ9NPE2 291 aaKnown RBP12.33□□□□□ -0.44
HDAC6-201ENST00000334136 CISHQ9NSE2 258 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 ABI2Q9NYB9 513 aaPredicted RBP12.33□□□□□ -0.44
HDAC6-201ENST00000334136 STRIP2Q9ULQ0 834 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 ADGRA3Q8IWK6 1321 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 ADGRA2Q96PE1 1338 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 LRRC10BA6NIK2 292 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 ADAMTS4O75173 837 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 YWHAHQ04917 246 aaPredicted RBP12.33□□□□□ -0.44
HDAC6-201ENST00000334136 ORC1Q13415 861 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 KRT81Q14533 505 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 CBWD6Q4V339 395 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 EPC2Q52LR7 807 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 CBWD3Q5JTY5 395 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 CBWD5Q5RIA9 395 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 ZNF280DQ6N043 979 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 OR5B17Q8NGF7 314 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 EPS8L3Q8TE67 593 aaKnown RBP12.33□□□□□ -0.44
HDAC6-201ENST00000334136 LRRC15Q8TF66 581 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 ALG6Q9Y672 507 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 SCINQ9Y6U3 715 aa12.33□□□□□ -0.44
HDAC6-201ENST00000334136 BRCA1P38398 1863 aaKnown RBP12.32□□□□□ -0.44
HDAC6-201ENST00000334136 KITP10721 976 aa12.32□□□□□ -0.44
HDAC6-201ENST00000334136 LHX1P48742 406 aa12.32□□□□□ -0.44
HDAC6-201ENST00000334136 RGS7P49802 495 aa12.32□□□□□ -0.44
HDAC6-201ENST00000334136 PIP4K2CQ8TBX8 421 aa12.32□□□□□ -0.44
HDAC6-201ENST00000334136 SENP8Q96LD8 212 aa12.32□□□□□ -0.44
HDAC6-201ENST00000334136 HSD3B7Q9H2F3 369 aa12.32□□□□□ -0.44
HDAC6-201ENST00000334136 IFT122Q9HBG6 1241 aa12.32□□□□□ -0.44
HDAC6-201ENST00000334136 SLC12A6Q9UHW9 1150 aa12.32□□□□□ -0.44
HDAC6-201ENST00000334136 MSRAQ9UJ68 235 aa12.32□□□□□ -0.44
HDAC6-201ENST00000334136 CST5P28325 142 aaPredicted RBP12.32□□□□□ -0.44
HDAC6-201ENST00000334136 RAP1GAPP47736 663 aa12.32□□□□□ -0.44
HDAC6-201ENST00000334136 FPGSQ05932 587 aa12.32□□□□□ -0.44
HDAC6-201ENST00000334136 GRIK3Q13003 919 aa12.32□□□□□ -0.44
HDAC6-201ENST00000334136 CCDC14Q49A88 953 aa12.32□□□□□ -0.44
HDAC6-201ENST00000334136 LRRC23Q53EV4 343 aaPredicted RBP12.32□□□□□ -0.44
HDAC6-201ENST00000334136 FOXR2Q6PJQ5 311 aa12.32□□□□□ -0.44
HDAC6-201ENST00000334136 CENPUQ71F23 418 aa12.32□□□□□ -0.44
HDAC6-201ENST00000334136 SMYD3Q9H7B4 428 aa12.32□□□□□ -0.44
HDAC6-201ENST00000334136 CDHR5Q9HBB8 845 aa12.32□□□□□ -0.44
HDAC6-201ENST00000334136 PHF24Q9UPV7 400 aa12.32□□□□□ -0.44
HDAC6-201ENST00000334136 SMCHD1A6NHR9 2005 aa12.32□□□□□ -0.44
HDAC6-201ENST00000334136 SMIM28A0A1B0GU29 152 aa12.32□□□□□ -0.44
HDAC6-201ENST00000334136 NOL3O60936 208 aaKnown RBP12.32□□□□□ -0.44
HDAC6-201ENST00000334136 CTGFP29279 349 aa12.32□□□□□ -0.44
HDAC6-201ENST00000334136 TPD52P55327 224 aaPredicted RBP12.32□□□□□ -0.44
HDAC6-201ENST00000334136 PDE1BQ01064 536 aa12.32□□□□□ -0.44
HDAC6-201ENST00000334136 ZBTB41Q5SVQ8 909 aa12.32□□□□□ -0.44
HDAC6-201ENST00000334136 SUGP1Q8IWZ8 645 aaKnown RBP12.32□□□□□ -0.44
HDAC6-201ENST00000334136 FAM161BQ96MY7 647 aa12.32□□□□□ -0.44
HDAC6-201ENST00000334136 VCX3AQ9NNX9 186 aa12.32□□□□□ -0.44
HDAC6-201ENST00000334136 REXO2Q9Y3B8 237 aaKnown RBP12.32□□□□□ -0.44
HDAC6-201ENST00000334136 PSME4Q14997 1843 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 LCP1P13796 627 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 BRD2P25440 801 aaKnown RBP12.31□□□□□ -0.44
HDAC6-201ENST00000334136 TUSC3Q13454 348 aa12.31□□□□□ -0.44
HDAC6-201ENST00000334136 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.31□□□□□ -0.44
HDAC6-201ENST00000334136 NAIF1Q69YI7 327 aaPredicted RBP12.31□□□□□ -0.44
HDAC6-201ENST00000334136 RFX6Q8HWS3 928 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms