RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 TSPAN18Q96SJ8 248 aa11.24□□□□□ -0.61
CCDC172-201ENST00000333254 CYTH2Q99418 400 aa11.24□□□□□ -0.61
CCDC172-201ENST00000333254 NT5C1AQ9BXI3 368 aa11.24□□□□□ -0.61
CCDC172-201ENST00000333254 VPS11Q9H270 941 aa11.24□□□□□ -0.61
CCDC172-201ENST00000333254 ECT2Q9H8V3 914 aa11.24□□□□□ -0.61
CCDC172-201ENST00000333254 PRDM16Q9HAZ2 1276 aa11.24□□□□□ -0.61
CCDC172-201ENST00000333254 CYLDQ9NQC7 956 aa11.24□□□□□ -0.61
CCDC172-201ENST00000333254 TXLNGQ9NUQ3 528 aa11.24□□□□□ -0.61
CCDC172-201ENST00000333254 PAK5Q9P286 719 aa11.24□□□□□ -0.61
CCDC172-201ENST00000333254 PPP1R1BQ9UD71 204 aaPredicted RBP11.24□□□□□ -0.61
CCDC172-201ENST00000333254 TJP2Q9UDY2 1190 aa11.24□□□□□ -0.61
CCDC172-201ENST00000333254 MDM4O15151 490 aa11.23□□□□□ -0.61
CCDC172-201ENST00000333254 HNRNPCL1O60812 293 aaKnown RBP11.23□□□□□ -0.61
CCDC172-201ENST00000333254 ECM2O94769 699 aaPredicted RBP11.23□□□□□ -0.61
CCDC172-201ENST00000333254 TMEM63AO94886 807 aa11.23□□□□□ -0.61
CCDC172-201ENST00000333254 ATP6V1G2O95670 118 aa11.23□□□□□ -0.61
CCDC172-201ENST00000333254 DESP17661 470 aa11.23□□□□□ -0.61
CCDC172-201ENST00000333254 ARF4P18085 180 aaPredicted RBP11.23□□□□□ -0.61
CCDC172-201ENST00000333254 CA4P22748 312 aa11.23□□□□□ -0.61
CCDC172-201ENST00000333254 ALDH3A1P30838 453 aa11.23□□□□□ -0.61
CCDC172-201ENST00000333254 CDH8P55286 799 aa11.23□□□□□ -0.61
CCDC172-201ENST00000333254 CDC42EP1Q00587 391 aa11.23□□□□□ -0.61
CCDC172-201ENST00000333254 ROR1Q01973 937 aa11.23□□□□□ -0.61
CCDC172-201ENST00000333254 DPYSL3Q14195 570 aa11.23□□□□□ -0.61
CCDC172-201ENST00000333254 Q3C1V9 767 aa11.23□□□□□ -0.61
CCDC172-201ENST00000333254 FAM102AQ5T9C2 384 aaPredicted RBP11.23□□□□□ -0.61
CCDC172-201ENST00000333254 ANKRD22Q5VYY1 191 aa11.23□□□□□ -0.61
CCDC172-201ENST00000333254 SLC9A4Q6AI14 798 aa11.23□□□□□ -0.61
CCDC172-201ENST00000333254 ARMCX2Q7L311 632 aa11.23□□□□□ -0.61
CCDC172-201ENST00000333254 CCDC91Q7Z6B0 441 aa11.23□□□□□ -0.61
CCDC172-201ENST00000333254 FAM228AQ86W67 206 aa11.23□□□□□ -0.61
CCDC172-201ENST00000333254 CHSY1Q86X52 802 aa11.23□□□□□ -0.61
CCDC172-201ENST00000333254 UNC45BQ8IWX7 931 aa11.23□□□□□ -0.61
CCDC172-201ENST00000333254 FITM2Q8N6M3 262 aa11.23□□□□□ -0.61
CCDC172-201ENST00000333254 LRRC8CQ8TDW0 803 aa11.23□□□□□ -0.61
CCDC172-201ENST00000333254 ZC3H15Q8WU90 426 aaKnown RBP11.23□□□□□ -0.61
CCDC172-201ENST00000333254 ACSF2Q96CM8 615 aaPredicted RBP11.23□□□□□ -0.61
CCDC172-201ENST00000333254 HAUS1Q96CS2 278 aa11.23□□□□□ -0.61
CCDC172-201ENST00000333254 LRRC39Q96DD0 335 aa11.23□□□□□ -0.61
CCDC172-201ENST00000333254 RNF157Q96PX1 679 aa11.23□□□□□ -0.61
CCDC172-201ENST00000333254 PAFAH2Q99487 392 aa11.23□□□□□ -0.61
CCDC172-201ENST00000333254 ZNF670Q9BS34 389 aa11.23□□□□□ -0.61
CCDC172-201ENST00000333254 SLC4A5Q9BY07 1137 aa11.23□□□□□ -0.61
CCDC172-201ENST00000333254 RNPEPQ9H4A4 650 aa11.23□□□□□ -0.61
CCDC172-201ENST00000333254 HMGXB4Q9UGU5 601 aa11.23□□□□□ -0.61
CCDC172-201ENST00000333254 PNMA3Q9UL41 463 aa11.23□□□□□ -0.61
CCDC172-201ENST00000333254 AGAP1Q9UPQ3 857 aa11.23□□□□□ -0.61
CCDC172-201ENST00000333254 SLC45A1Q9Y2W3 748 aa11.23□□□□□ -0.61
CCDC172-201ENST00000333254 A0A087WZ62 844 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 IQANK1A0A1B0GTG1 560 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 BCLAF3A2AJT9 711 aaKnown RBP11.22□□□□□ -0.61
CCDC172-201ENST00000333254 ADM5C9JUS6 153 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 ATP2C2O75185 946 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 WFS1O76024 890 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 UNC5CO95185 931 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 ITGBL1O95965 494 aaPredicted RBP11.22□□□□□ -0.61
CCDC172-201ENST00000333254 GBP2P32456 591 aaPredicted RBP11.22□□□□□ -0.61
CCDC172-201ENST00000333254 OSTNP61366 133 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 CCNA1P78396 465 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 MGAT5Q09328 741 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 ZKSCAN8Q15776 578 aaPredicted RBP11.22□□□□□ -0.61
CCDC172-201ENST00000333254 PARP6Q2NL67 630 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 SMTNL2Q2TAL5 461 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 ZNF792Q3KQV3 632 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 FNBP1LQ5T0N5 605 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 ARHGAP17Q68EM7 881 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 TAPT1Q6NXT6 567 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 TMEM110Q86TL2 294 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 UNC93AQ86WB7 457 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 ECHDC2Q86YB7 292 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 EMC1Q8N766 993 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 LRRC52Q8N7C0 313 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 BANPQ8N9N5 519 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 FBXO36Q8NEA4 188 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 SPATA18Q8TC71 538 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 DCAKDQ8WVC6 231 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 INPP5DQ92835 1189 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 COPS5Q92905 334 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 RMDN2Q96LZ7 410 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 ACAP3Q96P50 834 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 PEBP4Q96S96 227 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 FDXACB1Q9BRP7 624 aaPredicted RBP11.22□□□□□ -0.61
CCDC172-201ENST00000333254 WDR83Q9BRX9 315 aaKnown RBP11.22□□□□□ -0.61
CCDC172-201ENST00000333254 R3HDMLQ9H3Y0 253 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 NOD2Q9HC29 1040 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 DPP3Q9NY33 737 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 GTF2IRD1Q9UHL9 959 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 XPO7Q9UIA9 1087 aaKnown RBP11.22□□□□□ -0.61
CCDC172-201ENST00000333254 ZNF180Q9UJW8 692 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 PHTF1Q9UMS5 762 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 RPL26L1Q9UNX3 145 aaKnown RBP11.22□□□□□ -0.61
CCDC172-201ENST00000333254 TEX264Q9Y6I9 313 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 SCN4AP35499 1836 aa11.22□□□□□ -0.61
CCDC172-201ENST00000333254 FOXO6A8MYZ6 492 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 C2CD2LO14523 706 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 PRPSAP2O60256 369 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 TSPAN1O60635 241 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 GJB1P08034 283 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 PFKMP08237 780 aa11.21□□□□□ -0.61
CCDC172-201ENST00000333254 CD48P09326 243 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms