RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 CCNG2Q16589 344 aa13.51□□□□□ -0.25
VSTM4-202ENST00000332853 HSD17B14Q9BPX1 270 aa13.51□□□□□ -0.25
VSTM4-202ENST00000332853 UBP1Q9NZI7 540 aa13.51□□□□□ -0.25
VSTM4-202ENST00000332853 SYF2O95926 243 aaKnown RBP13.51□□□□□ -0.25
VSTM4-202ENST00000332853 SPRP35270 261 aaPredicted RBP13.51□□□□□ -0.25
VSTM4-202ENST00000332853 SOX11P35716 441 aa13.51□□□□□ -0.25
VSTM4-202ENST00000332853 TKTL1P51854 596 aa13.51□□□□□ -0.25
VSTM4-202ENST00000332853 GTF2BQ00403 316 aa13.51□□□□□ -0.25
VSTM4-202ENST00000332853 CELF3Q5SZQ8 465 aaKnown RBP13.51□□□□□ -0.25
VSTM4-202ENST00000332853 RIOX2Q8IUF8 465 aa13.51□□□□□ -0.25
VSTM4-202ENST00000332853 CAVIN3Q969G5 261 aa13.51□□□□□ -0.25
VSTM4-202ENST00000332853 SGF29Q96ES7 293 aa13.51□□□□□ -0.25
VSTM4-202ENST00000332853 KIAA1257Q9ULG3 409 aa13.51□□□□□ -0.25
VSTM4-202ENST00000332853 SYNPO2Q9UMS6 1093 aa13.51□□□□□ -0.25
VSTM4-202ENST00000332853 PPME1Q9Y570 386 aa13.51□□□□□ -0.25
VSTM4-202ENST00000332853 PCDHA3Q9Y5H8 950 aa13.51□□□□□ -0.25
VSTM4-202ENST00000332853 TCHHQ07283 1943 aa13.51□□□□□ -0.25
VSTM4-202ENST00000332853 ADAM32Q8TC27 787 aa13.51□□□□□ -0.25
VSTM4-202ENST00000332853 TRIM4Q9C037 500 aa13.51□□□□□ -0.25
VSTM4-202ENST00000332853 IRAK4Q9NWZ3 460 aa13.51□□□□□ -0.25
VSTM4-202ENST00000332853 CYP2F1P24903 491 aa13.51□□□□□ -0.25
VSTM4-202ENST00000332853 CAPRIN1Q14444 709 aaKnown RBP13.51□□□□□ -0.25
VSTM4-202ENST00000332853 PDK2Q15119 407 aa13.51□□□□□ -0.25
VSTM4-202ENST00000332853 RIBC1Q8N443 379 aaPredicted RBP13.51□□□□□ -0.25
VSTM4-202ENST00000332853 SPATA20Q8TB22 786 aa13.51□□□□□ -0.25
VSTM4-202ENST00000332853 EPS8L1Q8TE68 723 aa13.51□□□□□ -0.25
VSTM4-202ENST00000332853 EML4Q9HC35 981 aaKnown RBP13.51□□□□□ -0.25
VSTM4-202ENST00000332853 RPS6KL1Q9Y6S9 549 aa13.51□□□□□ -0.25
VSTM4-202ENST00000332853 AP2B1P63010 937 aa13.51□□□□□ -0.25
VSTM4-202ENST00000332853 ADIGQ0VDE8 80 aa13.51□□□□□ -0.25
VSTM4-202ENST00000332853 LBRQ14739 615 aaKnown RBP13.51□□□□□ -0.25
VSTM4-202ENST00000332853 MFSD7Q6UXD7 560 aa13.51□□□□□ -0.25
VSTM4-202ENST00000332853 BTNL9Q6UXG8 535 aa13.51□□□□□ -0.25
VSTM4-202ENST00000332853 DDX53Q86TM3 631 aaKnown RBP13.51□□□□□ -0.25
VSTM4-202ENST00000332853 MYCBPQ99417 103 aaPredicted RBP13.51□□□□□ -0.25
VSTM4-202ENST00000332853 CYP3A43Q9HB55 503 aa13.51□□□□□ -0.25
VSTM4-202ENST00000332853 KCPQ6ZWJ8 1503 aa13.51□□□□□ -0.25
VSTM4-202ENST00000332853 ROBO3Q96MS0 1386 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 COL14A1Q05707 1796 aaKnown RBP13.5□□□□□ -0.25
VSTM4-202ENST00000332853 BST2Q10589 180 aaKnown RBP13.5□□□□□ -0.25
VSTM4-202ENST00000332853 TDRD10Q5VZ19 366 aaKnown RBP13.5□□□□□ -0.25
VSTM4-202ENST00000332853 TRIM15Q9C019 465 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 CHD2O14647 1828 aaKnown RBP13.5□□□□□ -0.25
VSTM4-202ENST00000332853 SPAG6O75602 509 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 SNHG28P0DPA3 235 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 TGM2P21980 687 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 POLE2P56282 527 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 TMEM259Q4ZIN3 620 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 LRRC8EQ6NSJ5 796 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 TSEN2Q8NCE0 465 aaKnown RBP13.5□□□□□ -0.25
VSTM4-202ENST00000332853 E2F7Q96AV8 911 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 TMA16Q96EY4 203 aaKnown RBP13.5□□□□□ -0.25
VSTM4-202ENST00000332853 CHST7Q9NS84 486 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 RIPK3Q9Y572 518 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 CCT8L1PA6NM43 557 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 F8VP50 259 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 ZNF263O14978 683 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 TGFB1I1O43294 461 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 ESRRBO95718 433 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 SNX17Q15036 470 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 NFIL3Q16649 462 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 IRF2BP1Q8IU81 584 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 DDX50Q9BQ39 737 aaKnown RBP13.5□□□□□ -0.25
VSTM4-202ENST00000332853 SAE1Q9UBE0 346 aaPredicted RBP13.5□□□□□ -0.25
VSTM4-202ENST00000332853 NDUFS3O75489 264 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 NFKBIAP25963 317 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 ZPBP2Q6X784 338 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 SH3TC2Q8TF17 1288 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 DNAJC18Q9H819 358 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 RAB21Q9UL25 225 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 DNPEPQ9ULA0 475 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 HES2Q9Y543 173 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 CNTNAP2Q9UHC6 1331 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 DGKIO75912 1065 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 KCNA2P16389 499 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 TARSP26639 723 aaKnown RBP13.5□□□□□ -0.25
VSTM4-202ENST00000332853 HARS2P49590 506 aaKnown RBP13.5□□□□□ -0.25
VSTM4-202ENST00000332853 ATN1P54259 1190 aaPredicted RBP13.5□□□□□ -0.25
VSTM4-202ENST00000332853 MYCBPAPQ8TBZ2 947 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 HAUS8Q9BT25 410 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 PHTF1Q9UMS5 762 aa13.5□□□□□ -0.25
VSTM4-202ENST00000332853 RIPK2O43353 540 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 LRRC36Q1X8D7 754 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 ANO5Q75V66 913 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 RNF217Q8TC41 542 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 RPRD1AQ96P16 312 aaPredicted RBP13.49□□□□□ -0.25
VSTM4-202ENST00000332853 PAFAH2Q99487 392 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 STOML1Q9UBI4 398 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 SLC27A1Q6PCB7 646 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 ELMSAN1Q6PJG2 1045 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 AMIGO3Q86WK7 504 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 FAM136AQ96C01 138 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 CCDC138Q96M89 665 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 AP3B1O00203 1094 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 NFICP08651 508 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 FDFT1P37268 417 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 HIC1Q14526 733 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 PRUNE1Q86TP1 453 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 STKLD1Q8NE28 680 aa13.49□□□□□ -0.25
VSTM4-202ENST00000332853 CELF6Q96J87 481 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms