RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 FOXD4L1Q9NU39 408 aa7.2□□□□□ -1.26
CSTF3-201ENST00000323959 ORC3Q9UBD5 711 aaPredicted RBP7.2□□□□□ -1.26
CSTF3-201ENST00000323959 MTORP42345 2549 aa7.2□□□□□ -1.26
CSTF3-201ENST00000323959 TP53BP1Q12888 1972 aaPredicted RBP7.2□□□□□ -1.26
CSTF3-201ENST00000323959 AKAP9Q99996 3911 aa7.2□□□□□ -1.26
CSTF3-201ENST00000323959 ARHGAP10A1A4S6 786 aa7.2□□□□□ -1.26
CSTF3-201ENST00000323959 CPLX1O14810 134 aa7.2□□□□□ -1.26
CSTF3-201ENST00000323959 RRP9O43818 475 aaKnown RBP7.2□□□□□ -1.26
CSTF3-201ENST00000323959 SIX3O95343 332 aaPredicted RBP7.2□□□□□ -1.26
CSTF3-201ENST00000323959 BMP15O95972 392 aa7.2□□□□□ -1.26
CSTF3-201ENST00000323959 IGLV3-19P01714 112 aa7.2□□□□□ -1.26
CSTF3-201ENST00000323959 KRT7P08729 469 aa7.2□□□□□ -1.26
CSTF3-201ENST00000323959 GABRR2P28476 465 aa7.2□□□□□ -1.26
CSTF3-201ENST00000323959 TIE1P35590 1138 aa7.2□□□□□ -1.26
CSTF3-201ENST00000323959 GRIA2P42262 883 aa7.2□□□□□ -1.26
CSTF3-201ENST00000323959 NCBP1Q09161 790 aaKnown RBP7.2□□□□□ -1.26
CSTF3-201ENST00000323959 DRP2Q13474 957 aa7.2□□□□□ -1.26
CSTF3-201ENST00000323959 TARBP2Q15633 366 aaKnown RBP7.2□□□□□ -1.26
CSTF3-201ENST00000323959 HASPINQ8TF76 798 aa7.2□□□□□ -1.26
CSTF3-201ENST00000323959 LEO1Q8WVC0 666 aaPredicted RBP7.2□□□□□ -1.26
CSTF3-201ENST00000323959 USP13Q92995 863 aaPredicted RBP7.2□□□□□ -1.26
CSTF3-201ENST00000323959 DNAJC25Q9H1X3 360 aa7.2□□□□□ -1.26
CSTF3-201ENST00000323959 TDP1Q9NUW8 608 aa7.2□□□□□ -1.26
CSTF3-201ENST00000323959 SEPT10Q9P0V9 454 aa7.2□□□□□ -1.26
CSTF3-201ENST00000323959 SUCLA2Q9P2R7 463 aaPredicted RBP7.2□□□□□ -1.26
CSTF3-201ENST00000323959 DENND4CQ5VZ89 1909 aa7.19□□□□□ -1.26
CSTF3-201ENST00000323959 RIOK3O14730 519 aaKnown RBP7.19□□□□□ -1.26
CSTF3-201ENST00000323959 CYP26A1O43174 497 aa7.19□□□□□ -1.26
CSTF3-201ENST00000323959 ALDH1A3P47895 512 aa7.19□□□□□ -1.26
CSTF3-201ENST00000323959 LACTB2Q53H82 288 aaPredicted RBP7.19□□□□□ -1.26
CSTF3-201ENST00000323959 ZNF579Q8NAF0 562 aaKnown RBP7.19□□□□□ -1.26
CSTF3-201ENST00000323959 SAP25Q8TEE9 199 aa7.19□□□□□ -1.26
CSTF3-201ENST00000323959 TNFRSF25Q93038 417 aa7.19□□□□□ -1.26
CSTF3-201ENST00000323959 PRR11Q96HE9 360 aaPredicted RBP7.19□□□□□ -1.26
CSTF3-201ENST00000323959 CATSPER2Q96P56 530 aa7.19□□□□□ -1.26
CSTF3-201ENST00000323959 LRRC2Q9BYS8 371 aa7.19□□□□□ -1.26
CSTF3-201ENST00000323959 TOMM22Q9NS69 142 aa7.19□□□□□ -1.26
CSTF3-201ENST00000323959 USP36Q9P275 1121 aaKnown RBP7.19□□□□□ -1.26
CSTF3-201ENST00000323959 TCEAL9Q9UHQ7 104 aa7.19□□□□□ -1.26
CSTF3-201ENST00000323959 H3BQV1 296 aa7.19□□□□□ -1.26
CSTF3-201ENST00000323959 M0R2N6 131 aa7.19□□□□□ -1.26
CSTF3-201ENST00000323959 MEIS2O14770 477 aa7.19□□□□□ -1.26
CSTF3-201ENST00000323959 DHX15O43143 795 aaKnown RBP7.19□□□□□ -1.26
CSTF3-201ENST00000323959 OPA1O60313 960 aa7.19□□□□□ -1.26
CSTF3-201ENST00000323959 CD99P14209 185 aa7.19□□□□□ -1.26
CSTF3-201ENST00000323959 XBP1P17861 261 aa7.19□□□□□ -1.26
CSTF3-201ENST00000323959 AVPR1AP37288 418 aa7.19□□□□□ -1.26
CSTF3-201ENST00000323959 PFKFB3Q16875 520 aaPredicted RBP7.19□□□□□ -1.26
CSTF3-201ENST00000323959 INF2Q27J81 1249 aa7.19□□□□□ -1.26
CSTF3-201ENST00000323959 MANEAQ5SRI9 462 aa7.19□□□□□ -1.26
CSTF3-201ENST00000323959 CCDC183Q5T5S1 534 aa7.19□□□□□ -1.26
CSTF3-201ENST00000323959 ZNF280DQ6N043 979 aa7.19□□□□□ -1.26
CSTF3-201ENST00000323959 SKA1Q96BD8 255 aa7.19□□□□□ -1.26
CSTF3-201ENST00000323959 TIGD1Q96MW7 591 aa7.19□□□□□ -1.26
CSTF3-201ENST00000323959 SLC46A2Q9BY10 475 aa7.19□□□□□ -1.26
CSTF3-201ENST00000323959 TMEM206Q9H813 350 aa7.19□□□□□ -1.26
CSTF3-201ENST00000323959 SENP2Q9HC62 589 aa7.19□□□□□ -1.26
CSTF3-201ENST00000323959 CASS4Q9NQ75 786 aa7.19□□□□□ -1.26
CSTF3-201ENST00000323959 DDX19AQ9NUU7 478 aaKnown RBP7.19□□□□□ -1.26
CSTF3-201ENST00000323959 EVA1BQ9NVM1 165 aa7.19□□□□□ -1.26
CSTF3-201ENST00000323959 FBXL5Q9UKA1 691 aa7.19□□□□□ -1.26
CSTF3-201ENST00000323959 CABIN1Q9Y6J0 2220 aa7.19□□□□□ -1.26
CSTF3-201ENST00000323959 CELSR3Q9NYQ7 3312 aa7.18□□□□□ -1.26
CSTF3-201ENST00000323959 CASTOR2A6NHX0 329 aa7.18□□□□□ -1.26
CSTF3-201ENST00000323959 KLRF2D3W0D1 207 aa7.18□□□□□ -1.26
CSTF3-201ENST00000323959 NADKO95544 446 aaPredicted RBP7.18□□□□□ -1.26
CSTF3-201ENST00000323959 HOXB2P14652 356 aa7.18□□□□□ -1.26
CSTF3-201ENST00000323959 ABCB4P21439 1286 aa7.18□□□□□ -1.26
CSTF3-201ENST00000323959 FXR2P51116 673 aaKnown RBP eCLIP7.18□□□□□ -1.26
CSTF3-201ENST00000323959 ZNF77Q15935 545 aa7.18□□□□□ -1.26
CSTF3-201ENST00000323959 ADALQ6DHV7 355 aa7.18□□□□□ -1.26
CSTF3-201ENST00000323959 CCDC82Q8N4S0 544 aa7.18□□□□□ -1.26
CSTF3-201ENST00000323959 EID2Q8N6I1 236 aa7.18□□□□□ -1.26
CSTF3-201ENST00000323959 CENPTQ96BT3 561 aa7.18□□□□□ -1.26
CSTF3-201ENST00000323959 PAAF1Q9BRP4 392 aa7.18□□□□□ -1.26
CSTF3-201ENST00000323959 CD248Q9HCU0 757 aa7.18□□□□□ -1.26
CSTF3-201ENST00000323959 PRDM8Q9NQV8 689 aa7.18□□□□□ -1.26
CSTF3-201ENST00000323959 MAD2L2Q9UI95 211 aa7.18□□□□□ -1.26
CSTF3-201ENST00000323959 N4BP3O15049 544 aa7.18□□□□□ -1.26
CSTF3-201ENST00000323959 PRPF40AO75400 957 aaKnown RBP7.18□□□□□ -1.26
CSTF3-201ENST00000323959 KAT7O95251 611 aa7.18□□□□□ -1.26
CSTF3-201ENST00000323959 GP1BAP07359 652 aa7.18□□□□□ -1.26
CSTF3-201ENST00000323959 LIPCP11150 499 aa7.18□□□□□ -1.26
CSTF3-201ENST00000323959 NTSR1P30989 418 aa7.18□□□□□ -1.26
CSTF3-201ENST00000323959 CSNK1EP49674 416 aaKnown RBP7.18□□□□□ -1.26
CSTF3-201ENST00000323959 CCT2P78371 535 aaKnown RBP7.18□□□□□ -1.26
CSTF3-201ENST00000323959 DNM1Q05193 864 aaKnown RBP7.18□□□□□ -1.26
CSTF3-201ENST00000323959 STK3Q13188 491 aa7.18□□□□□ -1.26
CSTF3-201ENST00000323959 RILPL1Q5EBL4 403 aa7.18□□□□□ -1.26
CSTF3-201ENST00000323959 GPIHBP1Q8IV16 184 aa7.18□□□□□ -1.26
CSTF3-201ENST00000323959 ELF4Q99607 663 aaPredicted RBP7.18□□□□□ -1.26
CSTF3-201ENST00000323959 EIF2AQ9BY44 585 aaKnown RBP7.18□□□□□ -1.26
CSTF3-201ENST00000323959 IFT122Q9HBG6 1241 aa7.18□□□□□ -1.26
CSTF3-201ENST00000323959 USP29Q9HBJ7 922 aa7.18□□□□□ -1.26
CSTF3-201ENST00000323959 NCOA5Q9HCD5 579 aaKnown RBP7.18□□□□□ -1.26
CSTF3-201ENST00000323959 BMP2KQ9NSY1 1161 aaPredicted RBP7.18□□□□□ -1.26
CSTF3-201ENST00000323959 SATB2Q9UPW6 733 aa7.18□□□□□ -1.26
CSTF3-201ENST00000323959 PPME1Q9Y570 386 aa7.18□□□□□ -1.26
CSTF3-201ENST00000323959 ZNF106Q9H2Y7 1883 aaKnown RBP7.18□□□□□ -1.26
CSTF3-201ENST00000323959 CELSR2Q9HCU4 2923 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms