RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 SPDYE1Q8NFV5 336 aaPredicted RBP12.57□□□□□ -0.4
NCL-201ENST00000322723 SLC35F5Q8WV83 523 aa12.57□□□□□ -0.4
NCL-201ENST00000322723 PWWP2AQ96N64 755 aa12.57□□□□□ -0.4
NCL-201ENST00000322723 KDM4CQ9H3R0 1056 aa12.57□□□□□ -0.4
NCL-201ENST00000322723 DPP3Q9NY33 737 aa12.57□□□□□ -0.4
NCL-201ENST00000322723 PRKAG3Q9UGI9 489 aa12.57□□□□□ -0.4
NCL-201ENST00000322723 CCDC160A6NGH7 325 aa12.57□□□□□ -0.4
NCL-201ENST00000322723 SLC15A5A6NIM6 579 aa12.57□□□□□ -0.4
NCL-201ENST00000322723 ADCY8P40145 1251 aa12.57□□□□□ -0.4
NCL-201ENST00000322723 MAGEA4P43358 317 aa12.57□□□□□ -0.4
NCL-201ENST00000322723 TAF11Q15544 211 aa12.57□□□□□ -0.4
NCL-201ENST00000322723 LONRF1Q17RB8 773 aa12.57□□□□□ -0.4
NCL-201ENST00000322723 EFHC2Q5JST6 749 aa12.57□□□□□ -0.4
NCL-201ENST00000322723 TAOK1Q7L7X3 1001 aa12.57□□□□□ -0.4
NCL-201ENST00000322723 CKAP2Q8WWK9 683 aa12.57□□□□□ -0.4
NCL-201ENST00000322723 ZMAT2Q96NC0 199 aaKnown RBP12.57□□□□□ -0.4
NCL-201ENST00000322723 PTPN18Q99952 460 aa12.57□□□□□ -0.4
NCL-201ENST00000322723 METTL5Q9NRN9 209 aaKnown RBP12.57□□□□□ -0.4
NCL-201ENST00000322723 CLUHO75153 1309 aa12.56□□□□□ -0.4
NCL-201ENST00000322723 RRN3P2A6NIE6 340 aa12.56□□□□□ -0.4
NCL-201ENST00000322723 PI4K2BG5E9Z4 385 aa12.56□□□□□ -0.4
NCL-201ENST00000322723 VTNP04004 478 aa12.56□□□□□ -0.4
NCL-201ENST00000322723 ATP5DP30049 168 aa12.56□□□□□ -0.4
NCL-201ENST00000322723 KYNUQ16719 465 aa12.56□□□□□ -0.4
NCL-201ENST00000322723 PCGF5Q86SE9 256 aa12.56□□□□□ -0.4
NCL-201ENST00000322723 NPLOC4Q8TAT6 608 aa12.56□□□□□ -0.4
NCL-201ENST00000322723 CPT1BQ92523 772 aa12.56□□□□□ -0.4
NCL-201ENST00000322723 KLHL11Q9NVR0 708 aa12.56□□□□□ -0.4
NCL-201ENST00000322723 USH1CQ9Y6N9 552 aa12.56□□□□□ -0.4
NCL-201ENST00000322723 LRRD1A4D1F6 860 aa12.56□□□□□ -0.4
NCL-201ENST00000322723 PIRO00625 290 aa12.56□□□□□ -0.4
NCL-201ENST00000322723 P4HA1P13674 534 aa12.56□□□□□ -0.4
NCL-201ENST00000322723 PSMA2P25787 234 aa12.56□□□□□ -0.4
NCL-201ENST00000322723 PSMC1P62191 440 aaKnown RBP12.56□□□□□ -0.4
NCL-201ENST00000322723 NOMO1Q15155 1222 aa12.56□□□□□ -0.4
NCL-201ENST00000322723 SLC9A4Q6AI14 798 aa12.56□□□□□ -0.4
NCL-201ENST00000322723 PRUNE1Q86TP1 453 aa12.56□□□□□ -0.4
NCL-201ENST00000322723 UNC93AQ86WB7 457 aa12.56□□□□□ -0.4
NCL-201ENST00000322723 CDR2LQ86X02 465 aaPredicted RBP12.56□□□□□ -0.4
NCL-201ENST00000322723 TRIM4Q9C037 500 aa12.56□□□□□ -0.4
NCL-201ENST00000322723 ABHD16BQ9H3Z7 469 aa12.56□□□□□ -0.4
NCL-201ENST00000322723 GDAP2Q9NXN4 497 aa12.56□□□□□ -0.4
NCL-201ENST00000322723 CASP8AP2Q9UKL3 1982 aa12.56□□□□□ -0.4
NCL-201ENST00000322723 CDH16O75309 829 aa12.56□□□□□ -0.4
NCL-201ENST00000322723 KCNE1P15382 129 aa12.56□□□□□ -0.4
NCL-201ENST00000322723 PECAM1P16284 738 aaPredicted RBP12.56□□□□□ -0.4
NCL-201ENST00000322723 MIPP30301 263 aa12.56□□□□□ -0.4
NCL-201ENST00000322723 GDF10P55107 478 aa12.56□□□□□ -0.4
NCL-201ENST00000322723 GPX6P59796 221 aa12.56□□□□□ -0.4
NCL-201ENST00000322723 NKX3-2P78367 333 aa12.56□□□□□ -0.4
NCL-201ENST00000322723 CRYMQ14894 314 aa12.56□□□□□ -0.4
NCL-201ENST00000322723 USTQ9Y2C2 406 aa12.56□□□□□ -0.4
NCL-201ENST00000322723 FAM163BP0C2L3 166 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 AXLP30530 894 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 CETN2P41208 172 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 NDST1P52848 882 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 SPRED3Q2MJR0 410 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 ZNF394Q53GI3 561 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 FAM183BPQ6ZVS7 135 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 ZNF365Q70YC5 407 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 TRABD2AQ86V40 505 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 TTC30AQ86WT1 665 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 ACAP3Q96P50 834 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 TINF2Q9BSI4 451 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 CNPY3Q9BT09 278 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 CD48P09326 243 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 ZSCAN5DPP0CG00 497 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 ETS1P14921 441 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 NR1H3Q13133 447 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 ACVR2BQ13705 512 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 DPYSL3Q14195 570 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 UBXN11Q5T124 520 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 DCUN1D2Q6PH85 259 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 ZDHHC17Q8IUH5 632 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 RBM15Q96T37 977 aaKnown RBP eCLIP12.55□□□□□ -0.43e-10■□□□□ 10.8
NCL-201ENST00000322723 CTNNAL1Q9UBT7 734 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 SLC24A2Q9UI40 661 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 SLC12A4Q9UP95 1085 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 NAALADL1Q9UQQ1 740 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 Q9Y3F1 56 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 L3MBTL1Q9Y468 752 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 MDM4O15151 490 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 UPP2O95045 317 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 ZNF865P0CJ78 1059 aaPredicted RBP12.55□□□□□ -0.4
NCL-201ENST00000322723 CREB1P16220 341 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 KCNJ11Q14654 390 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 CCDC14Q49A88 953 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 CGB2Q6NT52 195 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 DPY19L2Q6NUT2 758 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 CRYBG2Q8N1P7 616 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 KBTBD7Q8WVZ9 684 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 ACTR5Q9H9F9 607 aaPredicted RBP12.55□□□□□ -0.4
NCL-201ENST00000322723 PNPLA8Q9NP80 782 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 DOCK3Q8IZD9 2030 aa12.55□□□□□ -0.4
NCL-201ENST00000322723 OTUD4Q01804 1114 aaKnown RBP12.54□□□□□ -0.4
NCL-201ENST00000322723 TRIP13Q15645 432 aaPredicted RBP12.54□□□□□ -0.4
NCL-201ENST00000322723 DGKDQ16760 1214 aa12.54□□□□□ -0.4
NCL-201ENST00000322723 GALNTL6Q49A17 601 aa12.54□□□□□ -0.4
NCL-201ENST00000322723 ANKRD20A8PQ5CZ79 823 aa12.54□□□□□ -0.4
NCL-201ENST00000322723 SLC27A1Q6PCB7 646 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms