RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 TFR2Q9UP52 801 aa19.16■□□□□ 0.66
HMGA1-201ENST00000311487 E5RJQ4 531 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 H3BQ06 376 aaPredicted RBP19.15■□□□□ 0.66
HMGA1-201ENST00000311487 NRDCO43847 1150 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 AKR1B10O60218 316 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 ERBB2P04626 1255 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 USP17L7P0C7H9 530 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 TKTL1P51854 596 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 NOMO3P69849 1222 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 PDCLQ13371 301 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 PLD1Q13393 1074 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 ADAM15Q13444 863 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 STILQ15468 1287 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 TAF12Q16514 161 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 CLEC16AQ2KHT3 1053 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 GPR153Q6NV75 609 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 MMS22LQ6ZRQ5 1243 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 CCDC149Q6ZUS6 474 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 CCAR2Q8N163 923 aaKnown RBP19.15■□□□□ 0.66
HMGA1-201ENST00000311487 CCDC112Q8NEF3 446 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 C16orf45Q96MC5 204 aaPredicted RBP19.15■□□□□ 0.66
HMGA1-201ENST00000311487 CORO1BQ9BR76 489 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 CLEC1BQ9P126 229 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 VCANP13611 3396 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 SLC38A8A6NNN8 435 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 XPO1O14980 1071 aaKnown RBP19.15■□□□□ 0.66
HMGA1-201ENST00000311487 TRIM66O15016 1216 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 ATMINO43313 823 aaPredicted RBP19.15■□□□□ 0.66
HMGA1-201ENST00000311487 ZMYND10O75800 440 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 CYP1A1P04798 512 aaPredicted RBP19.15■□□□□ 0.66
HMGA1-201ENST00000311487 GJA1P17302 382 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 POU3F3P20264 500 aaPredicted RBP19.15■□□□□ 0.66
HMGA1-201ENST00000311487 MAGEA11P43364 429 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 KIF11P52732 1056 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 EPHB3P54753 998 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 PTPN20Q4JDL3 420 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 RAD9BQ6WBX8 426 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 DNAJB7Q7Z6W7 309 aaPredicted RBP19.15■□□□□ 0.66
HMGA1-201ENST00000311487 ZNF677Q86XU0 584 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 TMEM35BQ8NCS4 154 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 PIWIL1Q96J94 861 aaKnown RBP19.15■□□□□ 0.66
HMGA1-201ENST00000311487 PPP1R13BQ96KQ4 1090 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 C8orf48Q96LL4 319 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 C11orf70Q9BRQ4 267 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 LHX5Q9H2C1 402 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 PLEKHA4Q9H4M7 779 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 SYNCQ9H7C4 482 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 CEP83Q9Y592 693 aa19.15■□□□□ 0.66
HMGA1-201ENST00000311487 BZW2Q9Y6E2 419 aaKnown RBP19.15■□□□□ 0.66
HMGA1-201ENST00000311487 MTCL1Q9Y4B5 1905 aaKnown RBP19.14■□□□□ 0.66
HMGA1-201ENST00000311487 TNFRSF10BO14763 440 aa19.14■□□□□ 0.65
HMGA1-201ENST00000311487 GJB6O95452 261 aa19.14■□□□□ 0.65
HMGA1-201ENST00000311487 ABL1P00519 1130 aa19.14■□□□□ 0.65
HMGA1-201ENST00000311487 UNGP13051 313 aaPredicted RBP19.14■□□□□ 0.65
HMGA1-201ENST00000311487 LTBRP36941 435 aa19.14■□□□□ 0.65
HMGA1-201ENST00000311487 PLA2G4AP47712 749 aa19.14■□□□□ 0.65
HMGA1-201ENST00000311487 RPL10AP62906 217 aaKnown RBP19.14■□□□□ 0.65
HMGA1-201ENST00000311487 CYP26C1Q6V0L0 522 aa19.14■□□□□ 0.65
HMGA1-201ENST00000311487 DENND5BQ6ZUT9 1274 aa19.14■□□□□ 0.65
HMGA1-201ENST00000311487 GRASPQ7Z6J2 395 aaPredicted RBP19.14■□□□□ 0.65
HMGA1-201ENST00000311487 CDCA3Q99618 268 aaPredicted RBP19.14■□□□□ 0.65
HMGA1-201ENST00000311487 LRRC4Q9HBW1 653 aa19.14■□□□□ 0.65
HMGA1-201ENST00000311487 ZNF334Q9HCZ1 680 aaPredicted RBP19.14■□□□□ 0.65
HMGA1-201ENST00000311487 ZNF263O14978 683 aa19.13■□□□□ 0.65
HMGA1-201ENST00000311487 GRAP2O75791 330 aa19.13■□□□□ 0.65
HMGA1-201ENST00000311487 SETSIPP0DME0 302 aa19.13■□□□□ 0.65
HMGA1-201ENST00000311487 ABCB4P21439 1286 aa19.13■□□□□ 0.65
HMGA1-201ENST00000311487 TAF5Q15542 800 aa19.13■□□□□ 0.65
HMGA1-201ENST00000311487 ASTE1Q2TB18 679 aaPredicted RBP19.13■□□□□ 0.65
HMGA1-201ENST00000311487 CCDC122Q5T0U0 273 aa19.13■□□□□ 0.65
HMGA1-201ENST00000311487 SYCE2Q6PIF2 218 aa19.13■□□□□ 0.65
HMGA1-201ENST00000311487 ERICH1Q86X53 443 aa19.13■□□□□ 0.65
HMGA1-201ENST00000311487 FMNL3Q8IVF7 1028 aa19.13■□□□□ 0.65
HMGA1-201ENST00000311487 NUP93Q8N1F7 819 aa19.13■□□□□ 0.65
HMGA1-201ENST00000311487 ST13P5Q8NFI4 369 aaPredicted RBP19.13■□□□□ 0.65
HMGA1-201ENST00000311487 DESI2Q9BSY9 194 aa19.13■□□□□ 0.65
HMGA1-201ENST00000311487 PACSIN1Q9BY11 444 aa19.13■□□□□ 0.65
HMGA1-201ENST00000311487 PIDD1Q9HB75 910 aa19.13■□□□□ 0.65
HMGA1-201ENST00000311487 FTLP02792 175 aaPredicted RBP19.13■□□□□ 0.65
HMGA1-201ENST00000311487 HMGA1P17096 107 aaKnown RBP19.13■□□□□ 0.65
HMGA1-201ENST00000311487 NSFP46459 744 aaKnown RBP19.13■□□□□ 0.65
HMGA1-201ENST00000311487 CASP10Q92851 521 aa19.13■□□□□ 0.65
HMGA1-201ENST00000311487 ZNF707Q96C28 371 aaPredicted RBP19.13■□□□□ 0.65
HMGA1-201ENST00000311487 ZNF512Q96ME7 567 aaPredicted RBP19.13■□□□□ 0.65
HMGA1-201ENST00000311487 ULBP1Q9BZM6 244 aa19.13■□□□□ 0.65
HMGA1-201ENST00000311487 TRMT1Q9NXH9 659 aaKnown RBP19.13■□□□□ 0.65
HMGA1-201ENST00000311487 DNMT3BQ9UBC3 853 aaKnown RBP19.13■□□□□ 0.65
HMGA1-201ENST00000311487 GOLGA8SH3BPF8 625 aa19.12■□□□□ 0.65
HMGA1-201ENST00000311487 MYL4P12829 197 aa19.12■□□□□ 0.65
HMGA1-201ENST00000311487 TNNT1P13805 278 aa19.12■□□□□ 0.65
HMGA1-201ENST00000311487 TAF10Q12962 218 aa19.12■□□□□ 0.65
HMGA1-201ENST00000311487 ANKRD54Q6NXT1 300 aa19.12■□□□□ 0.65
HMGA1-201ENST00000311487 ALKBH5Q6P6C2 394 aaKnown RBP19.12■□□□□ 0.65
HMGA1-201ENST00000311487 NYAP1Q6ZVC0 841 aa19.12■□□□□ 0.65
HMGA1-201ENST00000311487 VPS36Q86VN1 386 aa19.12■□□□□ 0.65
HMGA1-201ENST00000311487 SIX6OS1Q8N1H7 587 aa19.12■□□□□ 0.65
HMGA1-201ENST00000311487 SMG7Q92540 1137 aaKnown RBP19.12■□□□□ 0.65
HMGA1-201ENST00000311487 PRDM6Q9NQX0 595 aa19.12■□□□□ 0.65
HMGA1-201ENST00000311487 NAGPAQ9UK23 515 aa19.12■□□□□ 0.65
HMGA1-201ENST00000311487 NUDT5Q9UKK9 219 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms