RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 STXBP2Q15833 593 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 DGKDQ16760 1214 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 TUBB8Q3ZCM7 444 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 BRDTQ58F21 947 aaPredicted RBP5.32□□□□□ -1.56
CKS1B-201ENST00000308987 HSP90B2PQ58FF3 399 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 TCP11X2Q5H9J9 407 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 FIGNQ5HY92 759 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 ZNF569Q5MCW4 686 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 CELF3Q5SZQ8 465 aaKnown RBP5.32□□□□□ -1.56
CKS1B-201ENST00000308987 IFIT1BQ5T764 474 aaKnown RBP5.32□□□□□ -1.56
CKS1B-201ENST00000308987 PAPD7Q5XG87 772 aaKnown RBP5.32□□□□□ -1.56
CKS1B-201ENST00000308987 FOXR2Q6PJQ5 311 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 USP49Q70CQ1 688 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 JAMLQ86YT9 394 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 CCDC170Q8IYT3 715 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 MYOCDQ8IZQ8 938 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 ENAHQ8N8S7 591 aaPredicted RBP5.32□□□□□ -1.56
CKS1B-201ENST00000308987 CCDC148Q8NFR7 591 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 PPTC7Q8NI37 304 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 NSUN6Q8TEA1 469 aaKnown RBP5.32□□□□□ -1.56
CKS1B-201ENST00000308987 MTMR8Q96EF0 704 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 LOXL4Q96JB6 756 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 SAMD11Q96NU1 681 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 DNAJC7Q99615 494 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 PDCD2LQ9BRP1 358 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 MYL10Q9BUA6 226 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 THAP9Q9H5L6 903 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 ANKZF1Q9H8Y5 726 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 TOMM22Q9NS69 142 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 ZNHIT6Q9NWK9 470 aaKnown RBP5.32□□□□□ -1.56
CKS1B-201ENST00000308987 GFOD1Q9NXC2 390 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 MYO6Q9UM54 1294 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 CAPN11Q9UMQ6 739 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 FAN1Q9Y2M0 1017 aa5.32□□□□□ -1.56
CKS1B-201ENST00000308987 ABCB11O95342 1321 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 A0A087X0B3 334 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 LGALS16A8MUM7 142 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 KCNJ18B7U540 433 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 GRM6O15303 877 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 POLR3GO15318 223 aaPredicted RBP5.31□□□□□ -1.56
CKS1B-201ENST00000308987 LINC01565O15544 149 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 DCXO43602 365 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 KRT86O43790 486 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 TBX10O75333 385 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 UBOX5O94941 541 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 RHOBTB3O94955 611 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 NDUFA10O95299 355 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 PARNO95453 639 aaKnown RBP5.31□□□□□ -1.56
CKS1B-201ENST00000308987 GGPS1O95749 300 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 RPN1P04843 607 aaKnown RBP5.31□□□□□ -1.56
CKS1B-201ENST00000308987 CTSHP09668 335 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 SCG2P13521 617 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 PRLRP16471 622 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 UBA1P22314 1058 aaKnown RBP5.31□□□□□ -1.56
CKS1B-201ENST00000308987 DNAJB1P25685 340 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 HOXA13P31271 388 aaPredicted RBP5.31□□□□□ -1.56
CKS1B-201ENST00000308987 KRT9P35527 623 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 CYLC1P35663 651 aaPredicted RBP5.31□□□□□ -1.56
CKS1B-201ENST00000308987 ACVRL1P37023 503 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 THPOP40225 353 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 GNAQP50148 359 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 DNM2P50570 870 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 MRPS9P82933 396 aaKnown RBP5.31□□□□□ -1.56
CKS1B-201ENST00000308987 HYAL1Q12794 435 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 GPM6BQ13491 265 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 KCNJ12Q14500 433 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 MTF1Q14872 753 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 NPY5RQ15761 445 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 CLUL1Q15846 466 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 MEA1Q16626 185 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 ZSCAN26Q16670 478 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 PFKFB3Q16875 520 aaPredicted RBP5.31□□□□□ -1.56
CKS1B-201ENST00000308987 SPECC1Q5M775 1068 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 GPATCH4Q5T3I0 446 aaKnown RBP5.31□□□□□ -1.56
CKS1B-201ENST00000308987 RRAGBQ5VZM2 374 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 WWC2Q6AWC2 1192 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 IQCEQ6IPM2 695 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 LEKR1Q6ZMV7 388 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 TRAPPC11Q7Z392 1133 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 ZNF572Q7Z3I7 529 aaPredicted RBP5.31□□□□□ -1.56
CKS1B-201ENST00000308987 RPAINQ86UA6 219 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 FAM114A1Q8IWE2 563 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 TMEM192Q8IY95 271 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 GRAMD1CQ8IYS0 662 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 ADSSL1Q8N142 457 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 SLC35F6Q8N357 371 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 TTC9BQ8N6N2 239 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 C7orf31Q8N865 590 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 TOP1MTQ969P6 601 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 CCDC47Q96A33 483 aaKnown RBP5.31□□□□□ -1.56
CKS1B-201ENST00000308987 PABPC5Q96DU9 382 aaKnown RBP5.31□□□□□ -1.56
CKS1B-201ENST00000308987 DHTKD1Q96HY7 919 aaPredicted RBP5.31□□□□□ -1.56
CKS1B-201ENST00000308987 EPSTI1Q96J88 318 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 RHOVQ96L33 236 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 AK8Q96MA6 479 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 UIMC1Q96RL1 719 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 IWS1Q96ST2 819 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 LZTS2Q9BRK4 669 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 DESI2Q9BSY9 194 aa5.31□□□□□ -1.56
CKS1B-201ENST00000308987 EDEM3Q9BZQ6 932 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms