RNA–Protein interactions for RNA: ENST00000299238.6

HPS6-201, Transcript of HPS6, biogenesis of lysosomal organelles complex 2 subunit 3, humanhuman

APPRIS P1 BASIC

Gene HPS6, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6-201ENST00000299238 RNF149Q8NC42 400 aa21.07■□□□□ 0.96
HPS6-201ENST00000299238 SLITRK1Q96PX8 696 aa21.07■□□□□ 0.96
HPS6-201ENST00000299238 ACO2Q99798 780 aaKnown RBP21.07■□□□□ 0.96
HPS6-201ENST00000299238 NOP56O00567 594 aaKnown RBP21.07■□□□□ 0.96
HPS6-201ENST00000299238 LIASO43766 372 aa21.07■□□□□ 0.96
HPS6-201ENST00000299238 TBX10O75333 385 aa21.07■□□□□ 0.96
HPS6-201ENST00000299238 AP3M2P53677 418 aa21.07■□□□□ 0.96
HPS6-201ENST00000299238 GRM1Q13255 1194 aa21.07■□□□□ 0.96
HPS6-201ENST00000299238 MTFR1Q15390 333 aa21.07■□□□□ 0.96
HPS6-201ENST00000299238 LIN52Q52LA3 116 aa21.07■□□□□ 0.96
HPS6-201ENST00000299238 TXNRD3NBQ6F5E7 133 aa21.07■□□□□ 0.96
HPS6-201ENST00000299238 ZBTB8OSQ8IWT0 167 aa21.07■□□□□ 0.96
HPS6-201ENST00000299238 DNAJC1Q96KC8 554 aaKnown RBP21.07■□□□□ 0.96
HPS6-201ENST00000299238 TXNRD2Q9NNW7 524 aa21.07■□□□□ 0.96
HPS6-201ENST00000299238 EURLQ9NYK6 297 aa21.07■□□□□ 0.96
HPS6-201ENST00000299238 DNPEPQ9ULA0 475 aa21.07■□□□□ 0.96
HPS6-201ENST00000299238 NAALADL1Q9UQQ1 740 aa21.07■□□□□ 0.96
HPS6-201ENST00000299238 TMCC1O94876 653 aa21.06■□□□□ 0.96
HPS6-201ENST00000299238 FOXN2P32314 431 aa21.06■□□□□ 0.96
HPS6-201ENST00000299238 CBX3Q13185 183 aa21.06■□□□□ 0.96
HPS6-201ENST00000299238 WDR72Q3MJ13 1102 aa21.06■□□□□ 0.96
HPS6-201ENST00000299238 RCOR2Q8IZ40 523 aa21.06■□□□□ 0.96
HPS6-201ENST00000299238 ABTB1Q969K4 478 aaPredicted RBP21.06■□□□□ 0.96
HPS6-201ENST00000299238 MPHOSPH6Q99547 160 aaKnown RBP21.06■□□□□ 0.96
HPS6-201ENST00000299238 GMEB1Q9Y692 573 aa21.06■□□□□ 0.96
HPS6-201ENST00000299238 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.06■□□□□ 0.96
HPS6-201ENST00000299238 ANK1P16157 1881 aa21.06■□□□□ 0.96
HPS6-201ENST00000299238 MGAMO43451 1857 aa21.06■□□□□ 0.96
HPS6-201ENST00000299238 MXD4Q14582 209 aaPredicted RBP21.06■□□□□ 0.96
HPS6-201ENST00000299238 SETDB1Q15047 1291 aa21.06■□□□□ 0.96
HPS6-201ENST00000299238 CELF3Q5SZQ8 465 aaKnown RBP21.06■□□□□ 0.96
HPS6-201ENST00000299238 MFSD7Q6UXD7 560 aa21.06■□□□□ 0.96
HPS6-201ENST00000299238 C4orf50Q6ZRC1 276 aa21.06■□□□□ 0.96
HPS6-201ENST00000299238 ZCCHC9Q8N567 271 aaKnown RBP21.06■□□□□ 0.96
HPS6-201ENST00000299238 SPOCK2Q92563 424 aa21.06■□□□□ 0.96
HPS6-201ENST00000299238 MRRFQ96E11 262 aaKnown RBP21.06■□□□□ 0.96
HPS6-201ENST00000299238 LRRC37BQ96QE4 947 aa21.06■□□□□ 0.96
HPS6-201ENST00000299238 MIPEPQ99797 713 aa21.06■□□□□ 0.96
HPS6-201ENST00000299238 SLC4A7Q9Y6M7 1214 aa21.06■□□□□ 0.96
HPS6-201ENST00000299238 OGTO15294 1046 aa21.05■□□□□ 0.96
HPS6-201ENST00000299238 GAS2O43903 313 aaKnown RBP21.05■□□□□ 0.96
HPS6-201ENST00000299238 SLC25A27O95847 323 aa21.05■□□□□ 0.96
HPS6-201ENST00000299238 STX2P32856 288 aa21.05■□□□□ 0.96
HPS6-201ENST00000299238 MYL6P60660 151 aa21.05■□□□□ 0.96
HPS6-201ENST00000299238 OGDHQ02218 1023 aa21.05■□□□□ 0.96
HPS6-201ENST00000299238 MAPK6Q16659 721 aa21.05■□□□□ 0.96
HPS6-201ENST00000299238 ACSBG2Q5FVE4 666 aa21.05■□□□□ 0.96
HPS6-201ENST00000299238 ERO1BQ86YB8 467 aa21.05■□□□□ 0.96
HPS6-201ENST00000299238 INPP5DQ92835 1189 aa21.05■□□□□ 0.96
HPS6-201ENST00000299238 RBM15Q96T37 977 aaKnown RBP eCLIP21.05■□□□□ 0.963e-9■■■■■ 30.7
HPS6-201ENST00000299238 PITPNM3Q9BZ71 974 aa21.05■□□□□ 0.96
HPS6-201ENST00000299238 IVNS1ABPQ9Y6Y0 642 aa21.05■□□□□ 0.96
HPS6-201ENST00000299238 F8VP50 259 aa21.05■□□□□ 0.96
HPS6-201ENST00000299238 SUPT3HO75486 399 aa21.05■□□□□ 0.96
HPS6-201ENST00000299238 ASLP04424 464 aa21.05■□□□□ 0.96
HPS6-201ENST00000299238 FASTKD3Q14CZ7 662 aaKnown RBP21.05■□□□□ 0.96
HPS6-201ENST00000299238 TMED2Q15363 201 aa21.05■□□□□ 0.96
HPS6-201ENST00000299238 TMEM63BQ5T3F8 832 aa21.05■□□□□ 0.96
HPS6-201ENST00000299238 DRICH1Q6PGQ1 229 aaPredicted RBP21.05■□□□□ 0.96
HPS6-201ENST00000299238 MOB2Q70IA6 237 aa21.05■□□□□ 0.96
HPS6-201ENST00000299238 ARMCX6Q7L4S7 300 aa21.05■□□□□ 0.96
HPS6-201ENST00000299238 FBXO16Q8IX29 292 aaPredicted RBP21.05■□□□□ 0.96
HPS6-201ENST00000299238 SLC35B4Q969S0 331 aa21.05■□□□□ 0.96
HPS6-201ENST00000299238 IQCGQ9H095 443 aaKnown RBP21.05■□□□□ 0.96
HPS6-201ENST00000299238 KRT82Q9NSB4 513 aa21.05■□□□□ 0.96
HPS6-201ENST00000299238 AGTPBP1Q9UPW5 1226 aa21.05■□□□□ 0.96
HPS6-201ENST00000299238 IGKV6-21A0A0C4DH24 114 aa21.04■□□□□ 0.96
HPS6-201ENST00000299238 CDH16O75309 829 aa21.04■□□□□ 0.96
HPS6-201ENST00000299238 LSM8O95777 96 aaKnown RBP21.04■□□□□ 0.96
HPS6-201ENST00000299238 ITGA2BP08514 1039 aa21.04■□□□□ 0.96
HPS6-201ENST00000299238 TTLL12Q14166 644 aaPredicted RBP21.04■□□□□ 0.96
HPS6-201ENST00000299238 LRRC38Q5VT99 294 aa21.04■□□□□ 0.96
HPS6-201ENST00000299238 SMC1BQ8NDV3 1235 aa21.04■□□□□ 0.96
HPS6-201ENST00000299238 MCEEQ96PE7 176 aa21.04■□□□□ 0.96
HPS6-201ENST00000299238 CPSF3Q9UKF6 684 aaKnown RBP21.04■□□□□ 0.96
HPS6-201ENST00000299238 COMMD3-BMI1R4GMX3 469 aa21.04■□□□□ 0.96
HPS6-201ENST00000299238 TMEM221A6NGB7 291 aa21.04■□□□□ 0.96
HPS6-201ENST00000299238 KRT1P04264 644 aa21.04■□□□□ 0.96
HPS6-201ENST00000299238 CALB1P05937 261 aa21.04■□□□□ 0.96
HPS6-201ENST00000299238 TAC1P20366 129 aa21.04■□□□□ 0.96
HPS6-201ENST00000299238 KPNB1Q14974 876 aaKnown RBP21.04■□□□□ 0.96
HPS6-201ENST00000299238 RHPN2Q8IUC4 686 aa21.04■□□□□ 0.96
HPS6-201ENST00000299238 RIBC1Q8N443 379 aaPredicted RBP21.04■□□□□ 0.96
HPS6-201ENST00000299238 TRAPPC12Q8WVT3 735 aa21.04■□□□□ 0.96
HPS6-201ENST00000299238 ZNF668Q96K58 619 aaPredicted RBP21.04■□□□□ 0.96
HPS6-201ENST00000299238 FOXP3Q9BZS1 431 aa21.04■□□□□ 0.96
HPS6-201ENST00000299238 NIF3L1Q9GZT8 377 aa21.04■□□□□ 0.96
HPS6-201ENST00000299238 ZNF148Q9UQR1 794 aa21.04■□□□□ 0.96
HPS6-201ENST00000299238 TPD52L2O43399 206 aaKnown RBP21.03■□□□□ 0.96
HPS6-201ENST00000299238 HNRNPCP07910 306 aaKnown RBP eCLIP21.03■□□□□ 0.96
HPS6-201ENST00000299238 ABHD2P08910 425 aa21.03■□□□□ 0.96
HPS6-201ENST00000299238 CETN2P41208 172 aa21.03■□□□□ 0.96
HPS6-201ENST00000299238 MAGEA4P43358 317 aa21.03■□□□□ 0.96
HPS6-201ENST00000299238 ERFP50548 548 aa21.03■□□□□ 0.96
HPS6-201ENST00000299238 LMNB2Q03252 620 aa21.03■□□□□ 0.96
HPS6-201ENST00000299238 ACVR2BQ13705 512 aa21.03■□□□□ 0.96
HPS6-201ENST00000299238 STAT4Q14765 748 aa21.03■□□□□ 0.96
HPS6-201ENST00000299238 MFSD4BQ5TF39 518 aa21.03■□□□□ 0.96
HPS6-201ENST00000299238 PLPPR4Q7Z2D5 763 aa21.03■□□□□ 0.96
HPS6-201ENST00000299238 ARHGAP18Q8N392 663 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms