RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 OXNAD1Q96HP4 312 aaPredicted RBP20.02■□□□□ 0.8
LSM12-201ENST00000293406 IQCGQ9H095 443 aaKnown RBP20.02■□□□□ 0.8
LSM12-201ENST00000293406 ACAD9Q9H845 621 aa20.02■□□□□ 0.8
LSM12-201ENST00000293406 TAS2R1Q9NYW7 299 aa20.02■□□□□ 0.8
LSM12-201ENST00000293406 NXF1Q9UBU9 619 aaKnown RBP20.02■□□□□ 0.8
LSM12-201ENST00000293406 OGTO15294 1046 aa20.02■□□□□ 0.79
LSM12-201ENST00000293406 SPAG6O75602 509 aa20.02■□□□□ 0.79
LSM12-201ENST00000293406 UPP2O95045 317 aa20.02■□□□□ 0.79
LSM12-201ENST00000293406 MIPP30301 263 aa20.02■□□□□ 0.79
LSM12-201ENST00000293406 ROR1Q01973 937 aa20.02■□□□□ 0.79
LSM12-201ENST00000293406 CXCL9Q07325 125 aa20.02■□□□□ 0.79
LSM12-201ENST00000293406 SYCP2LQ5T4T6 812 aa20.02■□□□□ 0.79
LSM12-201ENST00000293406 DARS2Q6PI48 645 aaKnown RBP20.02■□□□□ 0.79
LSM12-201ENST00000293406 TTC7BQ86TV6 843 aa20.02■□□□□ 0.79
LSM12-201ENST00000293406 CPXM1Q96SM3 734 aa20.02■□□□□ 0.79
LSM12-201ENST00000293406 MMADHCQ9H3L0 296 aaPredicted RBP20.02■□□□□ 0.79
LSM12-201ENST00000293406 CNTN3Q9P232 1028 aa20.02■□□□□ 0.79
LSM12-201ENST00000293406 FCHO1O14526 889 aa20.01■□□□□ 0.79
LSM12-201ENST00000293406 CAPN9O14815 690 aa20.01■□□□□ 0.79
LSM12-201ENST00000293406 MSCO60682 206 aa20.01■□□□□ 0.79
LSM12-201ENST00000293406 RNF8O76064 485 aa20.01■□□□□ 0.79
LSM12-201ENST00000293406 ITGBL1O95965 494 aaPredicted RBP20.01■□□□□ 0.79
LSM12-201ENST00000293406 IL1BP01584 269 aa20.01■□□□□ 0.79
LSM12-201ENST00000293406 STIP1P31948 543 aaKnown RBP20.01■□□□□ 0.79
LSM12-201ENST00000293406 SURF1Q15526 300 aa20.01■□□□□ 0.79
LSM12-201ENST00000293406 WDR78Q5VTH9 848 aa20.01■□□□□ 0.79
LSM12-201ENST00000293406 XYLT1Q86Y38 959 aa20.01■□□□□ 0.79
LSM12-201ENST00000293406 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.01■□□□□ 0.79
LSM12-201ENST00000293406 PRPF31Q8WWY3 499 aaKnown RBP20.01■□□□□ 0.79
LSM12-201ENST00000293406 STMN2Q93045 179 aa20.01■□□□□ 0.79
LSM12-201ENST00000293406 XYLT2Q9H1B5 865 aa20.01■□□□□ 0.79
LSM12-201ENST00000293406 RSAD1Q9HA92 442 aa20.01■□□□□ 0.79
LSM12-201ENST00000293406 WDR35Q9P2L0 1181 aa20.01■□□□□ 0.79
LSM12-201ENST00000293406 COPEO14579 308 aa20.01■□□□□ 0.79
LSM12-201ENST00000293406 PSMG1O95456 288 aa20.01■□□□□ 0.79
LSM12-201ENST00000293406 EFNA5P52803 228 aa20.01■□□□□ 0.79
LSM12-201ENST00000293406 SLC34A1Q06495 639 aa20.01■□□□□ 0.79
LSM12-201ENST00000293406 STXBP2Q15833 593 aa20.01■□□□□ 0.79
LSM12-201ENST00000293406 ZC3H18Q86VM9 953 aaKnown RBP20.01■□□□□ 0.79
LSM12-201ENST00000293406 TEX13BQ9BXU2 312 aa20.01■□□□□ 0.79
LSM12-201ENST00000293406 NRBP2Q9NSY0 501 aa20.01■□□□□ 0.79
LSM12-201ENST00000293406 USP18Q9UMW8 372 aa20.01■□□□□ 0.79
LSM12-201ENST00000293406 POLIQ9UNA4 740 aa20.01■□□□□ 0.79
LSM12-201ENST00000293406 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20■□□□□ 0.79
LSM12-201ENST00000293406 FAM237BA0A1B0GVD1 139 aa20■□□□□ 0.79
LSM12-201ENST00000293406 ERBB2P04626 1255 aa20■□□□□ 0.79
LSM12-201ENST00000293406 RAP1GAPP47736 663 aa20■□□□□ 0.79
LSM12-201ENST00000293406 HIRAP54198 1017 aaPredicted RBP20■□□□□ 0.79
LSM12-201ENST00000293406 KCNJ11Q14654 390 aa20■□□□□ 0.79
LSM12-201ENST00000293406 LBRQ14739 615 aaKnown RBP20■□□□□ 0.79
LSM12-201ENST00000293406 TTC39BQ5VTQ0 682 aaPredicted RBP20■□□□□ 0.79
LSM12-201ENST00000293406 TMEM154Q6P9G4 183 aa20■□□□□ 0.79
LSM12-201ENST00000293406 NPNTQ6UXI9 565 aa20■□□□□ 0.79
LSM12-201ENST00000293406 NRG4Q8WWG1 115 aa20■□□□□ 0.79
LSM12-201ENST00000293406 FAF2Q96CS3 445 aa20■□□□□ 0.79
LSM12-201ENST00000293406 CFAP36Q96G28 342 aa20■□□□□ 0.79
LSM12-201ENST00000293406 SRPK1Q96SB4 655 aaKnown RBP20■□□□□ 0.79
LSM12-201ENST00000293406 ACO2Q99798 780 aaKnown RBP20■□□□□ 0.79
LSM12-201ENST00000293406 CPSF3Q9UKF6 684 aaKnown RBP20■□□□□ 0.79
LSM12-201ENST00000293406 WDR3Q9UNX4 943 aaKnown RBP eCLIP20■□□□□ 0.79
LSM12-201ENST00000293406 COL11A1P12107 1806 aaPredicted RBP20■□□□□ 0.79
LSM12-201ENST00000293406 PARP14Q460N5 1801 aa20■□□□□ 0.79
LSM12-201ENST00000293406 KLF11O14901 512 aa19.99■□□□□ 0.79
LSM12-201ENST00000293406 AVILO75366 819 aa19.99■□□□□ 0.79
LSM12-201ENST00000293406 TRUB2O95900 331 aaKnown RBP19.99■□□□□ 0.79
LSM12-201ENST00000293406 RARBP10826 455 aa19.99■□□□□ 0.79
LSM12-201ENST00000293406 TARBP2Q15633 366 aaKnown RBP19.99■□□□□ 0.79
LSM12-201ENST00000293406 LRRC74BQ6ZQY2 392 aa19.99■□□□□ 0.79
LSM12-201ENST00000293406 SLC26A11Q86WA9 606 aa19.99■□□□□ 0.79
LSM12-201ENST00000293406 ZNF483Q8TF39 744 aaPredicted RBP19.99■□□□□ 0.79
LSM12-201ENST00000293406 WDR60Q8WVS4 1066 aa19.99■□□□□ 0.79
LSM12-201ENST00000293406 SCG3Q8WXD2 468 aaKnown RBP19.99■□□□□ 0.79
LSM12-201ENST00000293406 LBHD1Q9BQE6 289 aaPredicted RBP19.99■□□□□ 0.79
LSM12-201ENST00000293406 NMUR2Q9GZQ4 415 aa19.99■□□□□ 0.79
LSM12-201ENST00000293406 ARMCX1Q9P291 453 aa19.99■□□□□ 0.79
LSM12-201ENST00000293406 ADAMTS5Q9UNA0 930 aa19.99■□□□□ 0.79
LSM12-201ENST00000293406 LRCH1Q9Y2L9 728 aa19.99■□□□□ 0.79
LSM12-201ENST00000293406 TRIM49D1C9J1S8 452 aa19.99■□□□□ 0.79
LSM12-201ENST00000293406 TBX10O75333 385 aa19.99■□□□□ 0.79
LSM12-201ENST00000293406 TNNC2P02585 160 aa19.99■□□□□ 0.79
LSM12-201ENST00000293406 HOXC6P09630 235 aa19.99■□□□□ 0.79
LSM12-201ENST00000293406 TUBP50607 506 aa19.99■□□□□ 0.79
LSM12-201ENST00000293406 MXRA7P84157 204 aa19.99■□□□□ 0.79
LSM12-201ENST00000293406 OCRLQ01968 901 aa19.99■□□□□ 0.79
LSM12-201ENST00000293406 MMRN1Q13201 1228 aa19.99■□□□□ 0.79
LSM12-201ENST00000293406 PRPF39Q86UA1 669 aaKnown RBP19.99■□□□□ 0.79
LSM12-201ENST00000293406 CTAGE3PQ8IX95 158 aa19.99■□□□□ 0.79
LSM12-201ENST00000293406 ARHGAP24Q8N264 748 aa19.99■□□□□ 0.79
LSM12-201ENST00000293406 ZNF280CQ8ND82 737 aa19.99■□□□□ 0.79
LSM12-201ENST00000293406 FAM136AQ96C01 138 aa19.99■□□□□ 0.79
LSM12-201ENST00000293406 SYT15Q9BQS2 421 aa19.99■□□□□ 0.79
LSM12-201ENST00000293406 IGKV6D-21A0A0A0MT36 114 aa19.98■□□□□ 0.79
LSM12-201ENST00000293406 ENO4A6NNW6 628 aa19.98■□□□□ 0.79
LSM12-201ENST00000293406 E5RJQ4 531 aa19.98■□□□□ 0.79
LSM12-201ENST00000293406 I3L4J1 428 aa19.98■□□□□ 0.79
LSM12-201ENST00000293406 CHADO15335 359 aa19.98■□□□□ 0.79
LSM12-201ENST00000293406 FAM155BO75949 473 aa19.98■□□□□ 0.79
LSM12-201ENST00000293406 SKIP12755 728 aa19.98■□□□□ 0.79
LSM12-201ENST00000293406 ICAM3P32942 547 aa19.98■□□□□ 0.79
LSM12-201ENST00000293406 HMGCS2P54868 508 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms