RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 MTO1Q9Y2Z2 717 aaKnown RBP16.4■□□□□ 0.22
CTDSP1-201ENST00000273062 MIF4GDA9UHW6 222 aaKnown RBP16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 FAM86B1E9PN63 330 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 NPM3O75607 178 aaKnown RBP16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 AKAP3O75969 853 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 FAM86B2P0C5J1 330 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 LMNB1P20700 586 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 HOXD13P35453 343 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 ARPC4P59998 168 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 SPIDRQ14159 915 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 MYBPC2Q14324 1141 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 DLGAP5Q15398 846 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 CLUL1Q15846 466 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 EFHC1Q5JVL4 640 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 FBXO11Q86XK2 927 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 PASD1Q8IV76 773 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 CENPSQ8N2Z9 138 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 TTLL6Q8N841 843 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 GMCL1Q96IK5 515 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 PPARGC1AQ9UBK2 798 aaKnown RBP16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 ZNF70Q9UC06 446 aaPredicted RBP16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 CNTNAP1P78357 1384 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 MED24O75448 989 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 CRTAMO95727 393 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 SRGAP2CP0DJJ0 459 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 SRGAP2BP0DMP2 458 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 CYP2C9P11712 490 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 ANXA13P27216 316 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 SERPINB6P35237 376 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 SOX5P35711 763 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 SLC18A1P54219 525 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 ARHGAP4P98171 946 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 CCDC153Q494R4 210 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 VASH1Q7L8A9 365 aaPredicted RBP16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 OGFOD1Q8N543 542 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 CD101Q93033 1021 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 DCUN1D1Q96GG9 259 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 DCUN1D5Q9BTE7 237 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 GPR88Q9GZN0 384 aa16.39■□□□□ 0.21
CTDSP1-201ENST00000273062 ANKRD62A6NC57 917 aa16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 SPOPO43791 374 aa16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 GGPS1O95749 300 aa16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 XRCC5P13010 732 aaKnown RBP16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 DRAP1Q14919 205 aaPredicted RBP16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 FAM209AQ5JX71 171 aa16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 RABGAP1LQ5R372 815 aa16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 POTEGQ6S5H5 508 aa16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 GALNT4Q8N4A0 578 aa16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 CRYGNQ8WXF5 182 aa16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 ZMAT2Q96NC0 199 aaKnown RBP16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 GLIS2Q9BZE0 524 aaPredicted RBP16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 SAYSD1Q9NPB0 183 aa16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 PRR12Q9ULL5 1215 aa16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 DTNAQ9Y4J8 743 aa16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 PRR5-ARHGAP8B1AHC4 643 aa16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 RSPH10B2B2RC85 870 aa16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 MEIS1O00470 390 aa16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 RSPH10BP0C881 870 aa16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 BGNP21810 368 aa16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 TKTP29401 623 aaKnown RBP16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 CPOXP36551 454 aa16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 ARHGAP8P85298 464 aa16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 PTK6Q13882 451 aa16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 UBAP2LQ14157 1087 aaKnown RBP16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 BORAQ6PGQ7 559 aa16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 FOXR2Q6PJQ5 311 aa16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 DHRS4L2Q6PKH6 230 aa16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 PRPF39Q86UA1 669 aaKnown RBP16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 ZBTB46Q86UZ6 589 aa16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 HSPH1Q92598 858 aa16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 SLC5A5Q92911 643 aa16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 NSMCE3Q96MG7 304 aa16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 BTBD9Q96Q07 612 aa16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 ZHX3Q9H4I2 956 aa16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 VPS51Q9UID3 782 aa16.38■□□□□ 0.21
CTDSP1-201ENST00000273062 DENRO43583 198 aaKnown RBP16.37■□□□□ 0.21
CTDSP1-201ENST00000273062 SORBS3O60504 671 aa16.37■□□□□ 0.21
CTDSP1-201ENST00000273062 LRRN2O75325 713 aa16.37■□□□□ 0.21
CTDSP1-201ENST00000273062 BANF1O75531 89 aa16.37■□□□□ 0.21
CTDSP1-201ENST00000273062 NELFEP18615 380 aaKnown RBP16.37■□□□□ 0.21
CTDSP1-201ENST00000273062 PSMC6P62333 389 aa16.37■□□□□ 0.21
CTDSP1-201ENST00000273062 HERC4Q5GLZ8 1057 aaPredicted RBP16.37■□□□□ 0.21
CTDSP1-201ENST00000273062 C6orf52Q5T4I8 152 aa16.37■□□□□ 0.21
CTDSP1-201ENST00000273062 NANOGP8Q6NSW7 305 aa16.37■□□□□ 0.21
CTDSP1-201ENST00000273062 C11orf63Q6NUN7 778 aa16.37■□□□□ 0.21
CTDSP1-201ENST00000273062 AAGABQ6PD74 315 aa16.37■□□□□ 0.21
CTDSP1-201ENST00000273062 LPCAT2Q7L5N7 544 aa16.37■□□□□ 0.21
CTDSP1-201ENST00000273062 LENG9Q96B70 501 aa16.37■□□□□ 0.21
CTDSP1-201ENST00000273062 PAIP1Q9H074 479 aaKnown RBP16.37■□□□□ 0.21
CTDSP1-201ENST00000273062 IKZF4Q9H2S9 585 aa16.37■□□□□ 0.21
CTDSP1-201ENST00000273062 ZNF696Q9H7X3 374 aa16.37■□□□□ 0.21
CTDSP1-201ENST00000273062 ZNF395Q9H8N7 513 aaPredicted RBP16.37■□□□□ 0.21
CTDSP1-201ENST00000273062 BCS1LQ9Y276 419 aa16.37■□□□□ 0.21
CTDSP1-201ENST00000273062 AP4B1Q9Y6B7 739 aa16.37■□□□□ 0.21
CTDSP1-201ENST00000273062 ATAD5Q96QE3 1844 aa16.37■□□□□ 0.21
CTDSP1-201ENST00000273062 SPECC1L-ADORA2AF8WAN1 911 aa16.37■□□□□ 0.21
CTDSP1-201ENST00000273062 H3BNX3 289 aa16.37■□□□□ 0.21
CTDSP1-201ENST00000273062 TNFAIP8O95379 198 aa16.37■□□□□ 0.21
CTDSP1-201ENST00000273062 STIP1P31948 543 aaKnown RBP16.37■□□□□ 0.21
CTDSP1-201ENST00000273062 PDAP1Q13442 181 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms