RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 RNF8O76064 485 aa17.17■□□□□ 0.34
TPM1-201ENST00000267996 HEXIM1O94992 359 aaKnown RBP17.17■□□□□ 0.34
TPM1-201ENST00000267996 OAZ2O95190 189 aa17.17■□□□□ 0.34
TPM1-201ENST00000267996 CLTBP09497 229 aa17.17■□□□□ 0.34
TPM1-201ENST00000267996 LCP1P13796 627 aa17.17■□□□□ 0.34
TPM1-201ENST00000267996 IL1R2P27930 398 aa17.17■□□□□ 0.34
TPM1-201ENST00000267996 MIPP30301 263 aa17.17■□□□□ 0.34
TPM1-201ENST00000267996 CHRNA3P32297 505 aa17.17■□□□□ 0.34
TPM1-201ENST00000267996 LBX1P52954 281 aa17.17■□□□□ 0.34
TPM1-201ENST00000267996 TAZQ16635 292 aa17.17■□□□□ 0.34
TPM1-201ENST00000267996 CNKSR3Q6P9H4 555 aa17.17■□□□□ 0.34
TPM1-201ENST00000267996 MAATS1Q7Z4T9 603 aa17.17■□□□□ 0.34
TPM1-201ENST00000267996 ANKS1BQ7Z6G8 1248 aa17.17■□□□□ 0.34
TPM1-201ENST00000267996 ZMIZ2Q8NF64 920 aa17.17■□□□□ 0.34
TPM1-201ENST00000267996 CLEC4CQ8WTT0 213 aa17.17■□□□□ 0.34
TPM1-201ENST00000267996 MYLPFQ96A32 169 aa17.17■□□□□ 0.34
TPM1-201ENST00000267996 SMARCD1Q96GM5 515 aa17.17■□□□□ 0.34
TPM1-201ENST00000267996 PAWRQ96IZ0 340 aaKnown RBP17.17■□□□□ 0.34
TPM1-201ENST00000267996 SLITRK1Q96PX8 696 aa17.17■□□□□ 0.34
TPM1-201ENST00000267996 C11orf84Q9BUA3 381 aaPredicted RBP17.17■□□□□ 0.34
TPM1-201ENST00000267996 PCYOX1Q9UHG3 505 aa17.17■□□□□ 0.34
TPM1-201ENST00000267996 AMACRQ9UHK6 382 aa17.17■□□□□ 0.34
TPM1-201ENST00000267996 KIAA0100Q14667 2235 aaKnown RBP17.17■□□□□ 0.34
TPM1-201ENST00000267996 NRP1O14786 923 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 TRAPPC3O43617 180 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 GRAP2O75791 330 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 TRUB2O95900 331 aaKnown RBP17.16■□□□□ 0.34
TPM1-201ENST00000267996 KRT1P04264 644 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 RALAP11233 206 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 GJC1P36383 396 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 PTPN9P43378 593 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 YWHAHQ04917 246 aaPredicted RBP17.16■□□□□ 0.34
TPM1-201ENST00000267996 MAPRE1Q15691 268 aaKnown RBP17.16■□□□□ 0.34
TPM1-201ENST00000267996 LRRC26Q2I0M4 334 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 EFHC1Q5JVL4 640 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 DEFB128Q7Z7B8 93 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 LRRTM3Q86VH5 581 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 IFT20Q8IY31 132 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 CMASQ8NFW8 434 aaPredicted RBP17.16■□□□□ 0.34
TPM1-201ENST00000267996 RAPGEF5Q92565 580 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 MAGOHBQ96A72 148 aaKnown RBP17.16■□□□□ 0.34
TPM1-201ENST00000267996 NCAPGQ9BPX3 1015 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 MRPL9Q9BYD2 267 aaKnown RBP17.16■□□□□ 0.34
TPM1-201ENST00000267996 LRRC19Q9H756 370 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 TMEM30AQ9NV96 361 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 TMLHEQ9NVH6 421 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 PRG3Q9Y2Y8 225 aaPredicted RBP17.16■□□□□ 0.34
TPM1-201ENST00000267996 C3orf70A6NLC5 250 aaPredicted RBP17.16■□□□□ 0.34
TPM1-201ENST00000267996 HHLA1C9JL84 531 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 SYN3O14994 580 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 SDC4P31431 198 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 CETN2P41208 172 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 PTGIRP43119 386 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 CACNA2D1P54289 1103 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 MAP3K7CLP57077 242 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 ADIGQ0VDE8 80 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 DHX34Q14147 1143 aaKnown RBP17.16■□□□□ 0.34
TPM1-201ENST00000267996 C15orf59Q2T9L4 293 aaPredicted RBP17.16■□□□□ 0.34
TPM1-201ENST00000267996 RAB41Q5JT25 222 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 MFSD7Q6UXD7 560 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 CYP4V2Q6ZWL3 525 aaPredicted RBP17.16■□□□□ 0.34
TPM1-201ENST00000267996 SEC14L1Q92503 715 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 CENPIQ92674 756 aaPredicted RBP17.16■□□□□ 0.34
TPM1-201ENST00000267996 RNF25Q96BH1 459 aaPredicted RBP17.16■□□□□ 0.34
TPM1-201ENST00000267996 RUNDC3BQ96NL0 473 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 TMEM175Q9BSA9 504 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 DDX23Q9BUQ8 820 aaKnown RBP17.16■□□□□ 0.34
TPM1-201ENST00000267996 COLEC11Q9BWP8 271 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 LRRC4Q9HBW1 653 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 EFR3BQ9Y2G0 817 aa17.16■□□□□ 0.34
TPM1-201ENST00000267996 FNDC1Q4ZHG4 1894 aaPredicted RBP17.15■□□□□ 0.34
TPM1-201ENST00000267996 FAM187AA6NFU0 413 aa17.15■□□□□ 0.34
TPM1-201ENST00000267996 TADA2AO75478 443 aa17.15■□□□□ 0.34
TPM1-201ENST00000267996 FBXO21O94952 628 aa17.15■□□□□ 0.34
TPM1-201ENST00000267996 SEC31AO94979 1220 aaKnown RBP17.15■□□□□ 0.34
TPM1-201ENST00000267996 ALDH2P05091 517 aa17.15■□□□□ 0.34
TPM1-201ENST00000267996 MYBL2P10244 700 aa17.15■□□□□ 0.34
TPM1-201ENST00000267996 CDKN2BP42772 138 aa17.15■□□□□ 0.34
TPM1-201ENST00000267996 SLC11A1P49279 550 aa17.15■□□□□ 0.34
TPM1-201ENST00000267996 FNTAP49354 379 aa17.15■□□□□ 0.34
TPM1-201ENST00000267996 CTCFP49711 727 aaPredicted RBP17.15■□□□□ 0.34
TPM1-201ENST00000267996 MRPS5P82675 430 aaKnown RBP17.15■□□□□ 0.34
TPM1-201ENST00000267996 TSPY1Q01534 308 aa17.15■□□□□ 0.34
TPM1-201ENST00000267996 GUCY2DQ02846 1103 aa17.15■□□□□ 0.34
TPM1-201ENST00000267996 SH3PXD2AQ5TCZ1 1133 aa17.15■□□□□ 0.34
TPM1-201ENST00000267996 TTC27Q6P3X3 843 aa17.15■□□□□ 0.34
TPM1-201ENST00000267996 SPOCD1Q6ZMY3 1216 aa17.15■□□□□ 0.34
TPM1-201ENST00000267996 CCDC50Q8IVM0 306 aa17.15■□□□□ 0.34
TPM1-201ENST00000267996 EIF1ADQ8N9N8 165 aaKnown RBP17.15■□□□□ 0.34
TPM1-201ENST00000267996 CFAP57Q96MR6 1250 aa17.15■□□□□ 0.34
TPM1-201ENST00000267996 TMEM209Q96SK2 561 aa17.15■□□□□ 0.34
TPM1-201ENST00000267996 EPB41L5Q9HCM4 733 aa17.15■□□□□ 0.34
TPM1-201ENST00000267996 KLHL11Q9NVR0 708 aa17.15■□□□□ 0.34
TPM1-201ENST00000267996 MARCH5Q9NX47 278 aa17.15■□□□□ 0.34
TPM1-201ENST00000267996 ADAM28Q9UKQ2 775 aa17.15■□□□□ 0.34
TPM1-201ENST00000267996 USP18Q9UMW8 372 aa17.15■□□□□ 0.34
TPM1-201ENST00000267996 PTPRDP23468 1912 aa17.15■□□□□ 0.34
TPM1-201ENST00000267996 NLRC5Q86WI3 1866 aa17.14■□□□□ 0.33
TPM1-201ENST00000267996 PI4K2BG5E9Z4 385 aa17.14■□□□□ 0.33
TPM1-201ENST00000267996 TTI1O43156 1089 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms