RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 TIMM50Q3ZCQ8 353 aa12.5□□□□□ -0.41
SRRM4-201ENST00000267260 FBXO28Q9NVF7 368 aa12.5□□□□□ -0.41
SRRM4-201ENST00000267260 WHRNQ9P202 907 aa12.5□□□□□ -0.41
SRRM4-201ENST00000267260 SH3BP1Q9Y3L3 701 aa12.5□□□□□ -0.41
SRRM4-201ENST00000267260 ZNF24P17028 368 aa12.5□□□□□ -0.41
SRRM4-201ENST00000267260 CACNA2D1P54289 1103 aa12.5□□□□□ -0.41
SRRM4-201ENST00000267260 ARID5BQ14865 1188 aa12.5□□□□□ -0.41
SRRM4-201ENST00000267260 TXNRD1Q16881 649 aa12.5□□□□□ -0.41
SRRM4-201ENST00000267260 ELOA2Q8IYF1 753 aaPredicted RBP12.5□□□□□ -0.41
SRRM4-201ENST00000267260 SYTL1Q8IYJ3 562 aa12.5□□□□□ -0.41
SRRM4-201ENST00000267260 ERP44Q9BS26 406 aa12.5□□□□□ -0.41
SRRM4-201ENST00000267260 TPRKBQ9Y3C4 175 aa12.5□□□□□ -0.41
SRRM4-201ENST00000267260 GLRA3O75311 464 aa12.5□□□□□ -0.41
SRRM4-201ENST00000267260 PLEKHA8P1O95397 391 aa12.5□□□□□ -0.41
SRRM4-201ENST00000267260 SERPINB5P36952 375 aa12.5□□□□□ -0.41
SRRM4-201ENST00000267260 TRAF2Q12933 501 aa12.5□□□□□ -0.41
SRRM4-201ENST00000267260 NAB2Q15742 525 aa12.5□□□□□ -0.41
SRRM4-201ENST00000267260 SMAD1Q15797 465 aaKnown RBP12.5□□□□□ -0.41
SRRM4-201ENST00000267260 SGO1Q5FBB7 561 aa12.5□□□□□ -0.41
SRRM4-201ENST00000267260 IZUMO2Q6UXV1 221 aa12.5□□□□□ -0.41
SRRM4-201ENST00000267260 SETD9Q8NE22 299 aa12.5□□□□□ -0.41
SRRM4-201ENST00000267260 FAM129BQ96TA1 746 aa12.5□□□□□ -0.41
SRRM4-201ENST00000267260 LRCH1Q9Y2L9 728 aa12.5□□□□□ -0.41
SRRM4-201ENST00000267260 NUP153P49790 1475 aaKnown RBP12.5□□□□□ -0.41
SRRM4-201ENST00000267260 ARF5P84085 180 aa12.5□□□□□ -0.41
SRRM4-201ENST00000267260 PDIA5Q14554 519 aa12.5□□□□□ -0.41
SRRM4-201ENST00000267260 LAYNQ6UX15 382 aa12.5□□□□□ -0.41
SRRM4-201ENST00000267260 VN1R5Q7Z5H4 357 aa12.5□□□□□ -0.41
SRRM4-201ENST00000267260 PSMD12O00232 456 aaPredicted RBP12.49□□□□□ -0.41
SRRM4-201ENST00000267260 ZRANB3Q5FWF4 1079 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 ZBTB49Q6ZSB9 765 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 ATP6V1HQ9UI12 483 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 TRIM32Q13049 653 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 FUT11Q495W5 492 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 ESRP1Q6NXG1 681 aaKnown RBP12.49□□□□□ -0.41
SRRM4-201ENST00000267260 SLC25A13Q9UJS0 675 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 UBE2QL1A1L167 161 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.49□□□□□ -0.41
SRRM4-201ENST00000267260 SSNA1O43805 119 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 ATP9AO75110 1047 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 NFICP08651 508 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 PCSK1P29120 753 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 CCNG1P51959 295 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 POLD3Q15054 466 aaPredicted RBP12.49□□□□□ -0.41
SRRM4-201ENST00000267260 PCSK7Q16549 785 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 MRNIPQ6NTE8 343 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 CCDC185Q8N715 623 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 SYNDIG1Q9H7V2 258 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 COPS7BQ9H9Q2 264 aaPredicted RBP12.49□□□□□ -0.41
SRRM4-201ENST00000267260 BICRAQ9NZM4 1560 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 DDHD2O94830 711 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 GTF2E2P29084 291 aaKnown RBP12.49□□□□□ -0.41
SRRM4-201ENST00000267260 ATG16L2Q8NAA4 619 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 SLC20A1Q8WUM9 679 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 APOL5Q9BWW9 433 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 RAD18Q9NS91 495 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 TPD52L2O43399 206 aaKnown RBP12.49□□□□□ -0.41
SRRM4-201ENST00000267260 TGM2P21980 687 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 S100GP29377 79 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 PTPN7P35236 360 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 EXOSC10Q01780 885 aaKnown RBP12.49□□□□□ -0.41
SRRM4-201ENST00000267260 FAM98BQ52LJ0 330 aaKnown RBP12.49□□□□□ -0.41
SRRM4-201ENST00000267260 TIGD7Q6NT04 549 aaPredicted RBP12.49□□□□□ -0.41
SRRM4-201ENST00000267260 MZT2AQ6P582 158 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 C18orf25Q96B23 403 aaPredicted RBP12.49□□□□□ -0.41
SRRM4-201ENST00000267260 ADGRL2O95490 1459 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 ABCA8O94911 1581 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 MGAT4DA6NG13 374 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 KCNA6P17658 529 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 KDELC2Q7Z4H8 507 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 KLHL1Q9NR64 748 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 TRPM5Q9NZQ8 1165 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 MYRFQ9Y2G1 1151 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 TRPM1Q7Z4N2 1603 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 PZPP20742 1482 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 EYA4O95677 639 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 CLTBP09497 229 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 CNPP09543 421 aaKnown RBP12.49□□□□□ -0.41
SRRM4-201ENST00000267260 YWHAQP27348 245 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 GRK4P32298 578 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 CAMK2GQ13555 558 aaPredicted RBP12.49□□□□□ -0.41
SRRM4-201ENST00000267260 NCOA4Q13772 614 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 EFHC1Q5JVL4 640 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 SWSAP1Q6NVH7 229 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 B3GNT6Q6ZMB0 384 aa12.49□□□□□ -0.41
SRRM4-201ENST00000267260 SYN2Q92777 582 aaPredicted RBP12.49□□□□□ -0.41
SRRM4-201ENST00000267260 PABPC5Q96DU9 382 aaKnown RBP12.49□□□□□ -0.41
SRRM4-201ENST00000267260 FMO5P49326 533 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 IL5RAQ01344 420 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 GRM4Q14833 912 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 CCNI2Q6ZMN8 369 aaPredicted RBP12.48□□□□□ -0.41
SRRM4-201ENST00000267260 LRRC71Q8N4P6 559 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 WDR60Q8WVS4 1066 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 HPS3Q969F9 1004 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 NT5C1AQ9BXI3 368 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 ENTPD7Q9NQZ7 604 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 CD2BP2O95400 341 aaKnown RBP12.48□□□□□ -0.41
SRRM4-201ENST00000267260 NPR3P17342 541 aa12.48□□□□□ -0.41
SRRM4-201ENST00000267260 SNRNP48Q6IEG0 339 aaKnown RBP12.48□□□□□ -0.41
SRRM4-201ENST00000267260 ULK2Q8IYT8 1036 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms