RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 TFDP3Q5H9I0 405 aa15.33■□□□□ 0.04
TRAFD1-201ENST00000257604 HOOK3Q86VS8 718 aa15.33■□□□□ 0.04
TRAFD1-201ENST00000257604 SRRM1Q8IYB3 904 aaKnown RBP15.33■□□□□ 0.04
TRAFD1-201ENST00000257604 KATNAL2Q8IYT4 538 aa15.33■□□□□ 0.04
TRAFD1-201ENST00000257604 RCOR2Q8IZ40 523 aa15.33■□□□□ 0.04
TRAFD1-201ENST00000257604 CCDC63Q8NA47 563 aa15.33■□□□□ 0.04
TRAFD1-201ENST00000257604 GRK7Q8WTQ7 553 aa15.33■□□□□ 0.04
TRAFD1-201ENST00000257604 MED10Q9BTT4 135 aa15.33■□□□□ 0.04
TRAFD1-201ENST00000257604 ASB7Q9H672 318 aa15.33■□□□□ 0.04
TRAFD1-201ENST00000257604 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.33■□□□□ 0.045e-7■■■□□ 16
TRAFD1-201ENST00000257604 C5orf60A6NFR6 353 aa15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 PRPSAP2O60256 369 aa15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 BEST2Q8NFU1 509 aa15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 ADAM32Q8TC27 787 aa15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 MIEF2Q96C03 454 aa15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 VCPIP1Q96JH7 1222 aa15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 SNX25Q9H3E2 840 aa15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 PIH1D1Q9NWS0 290 aaKnown RBP15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 STRIP2Q9ULQ0 834 aa15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 TRIP11Q15643 1979 aa15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 PECAM1P16284 738 aaPredicted RBP15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 GPD2P43304 727 aa15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 XRCC4Q13426 336 aa15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 SNX17Q15036 470 aa15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 FSCN1Q16658 493 aaKnown RBP15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 BBS9Q3SYG4 887 aa15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 BSPRYQ5W0U4 402 aa15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 DARS2Q6PI48 645 aaKnown RBP15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 RPAINQ86UA6 219 aa15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 SLC2A14Q8TDB8 520 aa15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 SCN1AP35498 2009 aa15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 CASTOR2A6NHX0 329 aa15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 SPTLC1O15269 473 aa15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 SPAG7O75391 227 aa15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 LSM8O95777 96 aaKnown RBP15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 CRHR2Q13324 411 aa15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 ANKS4BQ8N8V4 417 aa15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 SPATA18Q8TC71 538 aa15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 MAIP1Q8WWC4 291 aa15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 ART4Q93070 314 aa15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 ZNF317Q96PQ6 595 aaPredicted RBP15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 ADAM7Q9H2U9 754 aa15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 TMPRSS4Q9NRS4 437 aa15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 MORF4L1Q9UBU8 362 aa15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 NEU2Q9Y3R4 380 aa15.32■□□□□ 0.04
TRAFD1-201ENST00000257604 ELNP15502 786 aa15.31■□□□□ 0.04
TRAFD1-201ENST00000257604 GNL1P36915 607 aaPredicted RBP15.31■□□□□ 0.04
TRAFD1-201ENST00000257604 SOX4Q06945 474 aaPredicted RBP15.31■□□□□ 0.04
TRAFD1-201ENST00000257604 PDIA2Q13087 525 aaKnown RBP15.31■□□□□ 0.04
TRAFD1-201ENST00000257604 TTC30AQ86WT1 665 aa15.31■□□□□ 0.04
TRAFD1-201ENST00000257604 UBR7Q8N806 425 aa15.31■□□□□ 0.04
TRAFD1-201ENST00000257604 NSMCE1Q8WV22 266 aa15.31■□□□□ 0.04
TRAFD1-201ENST00000257604 TLCD1Q96CP7 247 aa15.31■□□□□ 0.04
TRAFD1-201ENST00000257604 CEP41Q9BYV8 373 aa15.31■□□□□ 0.04
TRAFD1-201ENST00000257604 AAASQ9NRG9 546 aa15.31■□□□□ 0.04
TRAFD1-201ENST00000257604 NOD1Q9Y239 953 aa15.31■□□□□ 0.04
TRAFD1-201ENST00000257604 SMIM28A0A1B0GU29 152 aa15.31■□□□□ 0.04
TRAFD1-201ENST00000257604 LIASO43766 372 aa15.31■□□□□ 0.04
TRAFD1-201ENST00000257604 DARSP14868 501 aaKnown RBP15.31■□□□□ 0.04
TRAFD1-201ENST00000257604 RNASELQ05823 741 aaKnown RBP15.31■□□□□ 0.04
TRAFD1-201ENST00000257604 SLMAPQ14BN4 828 aa15.31■□□□□ 0.04
TRAFD1-201ENST00000257604 ARRDC4Q8NCT1 418 aa15.31■□□□□ 0.04
TRAFD1-201ENST00000257604 FAM172AQ8WUF8 416 aa15.31■□□□□ 0.04
TRAFD1-201ENST00000257604 GAD1Q99259 594 aa15.31■□□□□ 0.04
TRAFD1-201ENST00000257604 KLF6Q99612 283 aaPredicted RBP15.31■□□□□ 0.04
TRAFD1-201ENST00000257604 DHX35Q9H5Z1 703 aaKnown RBP15.31■□□□□ 0.04
TRAFD1-201ENST00000257604 FGFR1OP2Q9NVK5 253 aa15.31■□□□□ 0.04
TRAFD1-201ENST00000257604 SAMD15Q9P1V8 674 aa15.31■□□□□ 0.04
TRAFD1-201ENST00000257604 CNTN6Q9UQ52 1028 aa15.31■□□□□ 0.04
TRAFD1-201ENST00000257604 hCG_1818297A0A087WSY0 165 aa15.3■□□□□ 0.04
TRAFD1-201ENST00000257604 C17orf102A2RUQ5 167 aa15.3■□□□□ 0.04
TRAFD1-201ENST00000257604 SIGLEC16A6NMB1 481 aa15.3■□□□□ 0.04
TRAFD1-201ENST00000257604 UBOX5O94941 541 aa15.3■□□□□ 0.04
TRAFD1-201ENST00000257604 PAEPP09466 180 aa15.3■□□□□ 0.04
TRAFD1-201ENST00000257604 RBP3P10745 1247 aa15.3■□□□□ 0.04
TRAFD1-201ENST00000257604 VDRP11473 427 aa15.3■□□□□ 0.04
TRAFD1-201ENST00000257604 EIF3EP60228 445 aaKnown RBP15.3■□□□□ 0.04
TRAFD1-201ENST00000257604 NME3Q13232 169 aa15.3■□□□□ 0.04
TRAFD1-201ENST00000257604 CCNG2Q16589 344 aa15.3■□□□□ 0.04
TRAFD1-201ENST00000257604 UNC45BQ8IWX7 931 aa15.3■□□□□ 0.04
TRAFD1-201ENST00000257604 ARHGEF2Q92974 986 aaKnown RBP15.3■□□□□ 0.04
TRAFD1-201ENST00000257604 PLCD4Q9BRC7 762 aa15.3■□□□□ 0.04
TRAFD1-201ENST00000257604 TRAIPQ9BWF2 469 aa15.3■□□□□ 0.04
TRAFD1-201ENST00000257604 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.3■□□□□ 0.04
TRAFD1-201ENST00000257604 ATP8B3O60423 1300 aa15.3■□□□□ 0.04
TRAFD1-201ENST00000257604 NRCAMQ92823 1304 aa15.3■□□□□ 0.04
TRAFD1-201ENST00000257604 SLC15A5A6NIM6 579 aa15.3■□□□□ 0.04
TRAFD1-201ENST00000257604 GOLGA8RI6L899 631 aa15.3■□□□□ 0.04
TRAFD1-201ENST00000257604 MGRN1O60291 552 aa15.3■□□□□ 0.04
TRAFD1-201ENST00000257604 GPR32O75388 356 aa15.3■□□□□ 0.04
TRAFD1-201ENST00000257604 RARGP13631 454 aa15.3■□□□□ 0.04
TRAFD1-201ENST00000257604 ITIH2P19823 946 aa15.3■□□□□ 0.04
TRAFD1-201ENST00000257604 MLH1P40692 756 aa15.3■□□□□ 0.04
TRAFD1-201ENST00000257604 CDKN2BP42772 138 aa15.3■□□□□ 0.04
TRAFD1-201ENST00000257604 KLF1Q13351 362 aaPredicted RBP15.3■□□□□ 0.04
TRAFD1-201ENST00000257604 SOWAHAQ2M3V2 549 aa15.3■□□□□ 0.04
TRAFD1-201ENST00000257604 FBXO47Q5MNV8 452 aa15.3■□□□□ 0.04
TRAFD1-201ENST00000257604 FAM131BQ86XD5 332 aa15.3■□□□□ 0.04
TRAFD1-201ENST00000257604 ATXN2LQ8WWM7 1075 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms