RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 ZNF614Q8N883 585 aa19.35■□□□□ 0.69
SMARCC1-201ENST00000254480 UTP6Q9NYH9 597 aaKnown RBP19.35■□□□□ 0.69
SMARCC1-201ENST00000254480 JCHAINP01591 159 aa19.35■□□□□ 0.69
SMARCC1-201ENST00000254480 POLD3Q15054 466 aaPredicted RBP19.35■□□□□ 0.69
SMARCC1-201ENST00000254480 E9PCH4 1651 aa19.35■□□□□ 0.69
SMARCC1-201ENST00000254480 FAM83EQ2M2I3 478 aa19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 ZNF571Q7Z3V5 609 aaPredicted RBP19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 CNDP1Q96KN2 507 aa19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 VPS28Q9UK41 221 aa19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 USP18Q9UMW8 372 aa19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 C2orf81A6NN90 581 aa19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 ANXA9O76027 345 aa19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 THP07101 528 aa19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 MAPK7Q13164 816 aa19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 BMPR2Q13873 1038 aa19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 ERO1BQ86YB8 467 aa19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 THAP11Q96EK4 314 aa19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 IMPDH2P12268 514 aa19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 TPH1P17752 444 aa19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 RAP1GDS1P52306 607 aa19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 PTAR1Q7Z6K3 402 aaPredicted RBP19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 PLD3Q8IV08 490 aa19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 GTF3C2Q8WUA4 911 aaPredicted RBP19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 CMTM5Q96DZ9 223 aa19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 ECSITQ9BQ95 431 aa19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 HPCAP84074 193 aa19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 TFDP3Q5H9I0 405 aa19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 XRRA1Q6P2D8 792 aa19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 CNBD2Q96M20 576 aa19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 KCNK16Q96T55 309 aa19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 SPATA16Q9BXB7 569 aa19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 MTO1Q9Y2Z2 717 aaKnown RBP19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 VDRP11473 427 aa19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 HERVK_113P62684 666 aa19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 RIN3Q8TB24 985 aa19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 SYTL5Q8TDW5 730 aaPredicted RBP19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 RXFP2Q8WXD0 754 aa19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 AP4E1Q9UPM8 1137 aa19.34■□□□□ 0.69
SMARCC1-201ENST00000254480 KLHL2O95198 593 aa19.33■□□□□ 0.69
SMARCC1-201ENST00000254480 TBL3Q12788 808 aaKnown RBP19.33■□□□□ 0.69
SMARCC1-201ENST00000254480 SMPD4Q9NXE4 827 aa19.33■□□□□ 0.69
SMARCC1-201ENST00000254480 MYL4P12829 197 aa19.33■□□□□ 0.69
SMARCC1-201ENST00000254480 SERPINB4P48594 390 aa19.33■□□□□ 0.69
SMARCC1-201ENST00000254480 IRAK1P51617 712 aa19.33■□□□□ 0.69
SMARCC1-201ENST00000254480 SNRPFP62306 86 aaKnown RBP19.33■□□□□ 0.69
SMARCC1-201ENST00000254480 ALDH6A1Q02252 535 aaKnown RBP19.33■□□□□ 0.69
SMARCC1-201ENST00000254480 NT5DC3Q86UY8 548 aa19.33■□□□□ 0.69
SMARCC1-201ENST00000254480 ADARB2Q9NS39 739 aaKnown RBP19.33■□□□□ 0.69
SMARCC1-201ENST00000254480 NSMCE4AQ9NXX6 385 aa19.33■□□□□ 0.69
SMARCC1-201ENST00000254480 KCNA3P22001 575 aa19.33■□□□□ 0.68
SMARCC1-201ENST00000254480 CYP24A1Q07973 514 aa19.33■□□□□ 0.68
SMARCC1-201ENST00000254480 ZNF484Q5JVG2 852 aa19.33■□□□□ 0.68
SMARCC1-201ENST00000254480 ZNF720Q7Z2F6 126 aa19.33■□□□□ 0.68
SMARCC1-201ENST00000254480 SRLQ86TD4 932 aa19.33■□□□□ 0.68
SMARCC1-201ENST00000254480 H2AFY2Q9P0M6 372 aaPredicted RBP19.33■□□□□ 0.68
SMARCC1-201ENST00000254480 FOXP2O15409 715 aa19.33■□□□□ 0.68
SMARCC1-201ENST00000254480 PQBP1O60828 265 aaKnown RBP19.33■□□□□ 0.68
SMARCC1-201ENST00000254480 LACRTQ9GZZ8 138 aa19.33■□□□□ 0.68
SMARCC1-201ENST00000254480 VIPAS39Q9H9C1 493 aa19.33■□□□□ 0.68
SMARCC1-201ENST00000254480 RRAGCQ9HB90 399 aa19.33■□□□□ 0.68
SMARCC1-201ENST00000254480 PXDNLA1KZ92 1463 aa19.33■□□□□ 0.68
SMARCC1-201ENST00000254480 ADM5C9JUS6 153 aa19.33■□□□□ 0.68
SMARCC1-201ENST00000254480 ATP6V1B1P15313 513 aa19.33■□□□□ 0.68
SMARCC1-201ENST00000254480 TKTL1P51854 596 aa19.33■□□□□ 0.68
SMARCC1-201ENST00000254480 LAMB3Q13751 1172 aa19.33■□□□□ 0.68
SMARCC1-201ENST00000254480 MTFR1Q15390 333 aa19.33■□□□□ 0.68
SMARCC1-201ENST00000254480 PGS1Q32NB8 556 aa19.33■□□□□ 0.68
SMARCC1-201ENST00000254480 ERAP2Q6P179 960 aa19.33■□□□□ 0.68
SMARCC1-201ENST00000254480 TMEM154Q6P9G4 183 aa19.33■□□□□ 0.68
SMARCC1-201ENST00000254480 CGRRF1Q99675 332 aa19.33■□□□□ 0.68
SMARCC1-201ENST00000254480 OSGEPL1Q9H4B0 414 aa19.33■□□□□ 0.68
SMARCC1-201ENST00000254480 PHTF1Q9UMS5 762 aa19.33■□□□□ 0.68
SMARCC1-201ENST00000254480 PLAGL2Q9UPG8 496 aa19.33■□□□□ 0.68
SMARCC1-201ENST00000254480 VWA5AO00534 786 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 GJB6O95452 261 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 TTI2Q6NXR4 508 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 RDM1Q8NG50 284 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 SEPT8Q92599 483 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 HEY2Q9UBP5 337 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 CDY2AQ9Y6F7 541 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 CDY1Q9Y6F8 540 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 A8MX80 341 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 SOAT2O75908 522 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 WDR47O94967 919 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 CYP2C8P10632 490 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 INSRRP14616 1297 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 C10orf53Q8N6V4 93 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 USE1Q9NZ43 259 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 TMX2Q9Y320 296 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 SLC26A4O43511 780 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 PSTPIP1O43586 416 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 CYTH3O43739 400 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 CAPZA2P47755 286 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 OXCT1P55809 520 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 LINC00523Q86TU6 105 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 MMGT1Q8N4V1 131 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 RUBCNQ92622 972 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 STARD7Q9NQZ5 370 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 DDX43Q9NXZ2 648 aaKnown RBP19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 HAO1Q9UJM8 370 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms