RNA–Protein interactions for RNA: ENST00000248566.3

SEM1-201, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEM1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-201ENST00000248566 SLITRK1Q96PX8 696 aa13.41□□□□□ -0.26
SEM1-201ENST00000248566 OSBPL6Q9BZF3 934 aa13.41□□□□□ -0.26
SEM1-201ENST00000248566 NIF3L1Q9GZT8 377 aa13.41□□□□□ -0.26
SEM1-201ENST00000248566 C8orf33Q9H7E9 229 aaPredicted RBP13.41□□□□□ -0.26
SEM1-201ENST00000248566 KIF9Q9HAQ2 790 aa13.41□□□□□ -0.26
SEM1-201ENST00000248566 KRT82Q9NSB4 513 aa13.41□□□□□ -0.26
SEM1-201ENST00000248566 TMEM30AQ9NV96 361 aa13.41□□□□□ -0.26
SEM1-201ENST00000248566 CTNND2Q9UQB3 1225 aa13.41□□□□□ -0.26
SEM1-201ENST00000248566 DENND4CQ5VZ89 1909 aa13.41□□□□□ -0.26
SEM1-201ENST00000248566 SLC16A3O15427 465 aaKnown RBP13.4□□□□□ -0.26
SEM1-201ENST00000248566 GFRA3O60609 400 aa13.4□□□□□ -0.26
SEM1-201ENST00000248566 YWHAQP27348 245 aa13.4□□□□□ -0.26
SEM1-201ENST00000248566 GTF2H1P32780 548 aa13.4□□□□□ -0.26
SEM1-201ENST00000248566 MAP3K7CLP57077 242 aa13.4□□□□□ -0.26
SEM1-201ENST00000248566 CSTF1Q05048 431 aaKnown RBP13.4□□□□□ -0.26
SEM1-201ENST00000248566 LRRC63Q05C16 580 aa13.4□□□□□ -0.26
SEM1-201ENST00000248566 RUNX3Q13761 415 aa13.4□□□□□ -0.26
SEM1-201ENST00000248566 MTF1Q14872 753 aa13.4□□□□□ -0.26
SEM1-201ENST00000248566 PON2Q15165 354 aa13.4□□□□□ -0.26
SEM1-201ENST00000248566 COBLL1Q53SF7 1204 aa13.4□□□□□ -0.26
SEM1-201ENST00000248566 UNC93AQ86WB7 457 aa13.4□□□□□ -0.26
SEM1-201ENST00000248566 FBXL13Q8NEE6 735 aa13.4□□□□□ -0.26
SEM1-201ENST00000248566 SCAMP5Q8TAC9 235 aa13.4□□□□□ -0.26
SEM1-201ENST00000248566 SH3RF2Q8TEC5 729 aa13.4□□□□□ -0.26
SEM1-201ENST00000248566 NELFBQ8WX92 580 aa13.4□□□□□ -0.26
SEM1-201ENST00000248566 SEMA4DQ92854 862 aa13.4□□□□□ -0.26
SEM1-201ENST00000248566 DHTKD1Q96HY7 919 aaPredicted RBP13.4□□□□□ -0.26
SEM1-201ENST00000248566 CEP295NLQ96MC4 621 aa13.4□□□□□ -0.26
SEM1-201ENST00000248566 NT5C1AQ9BXI3 368 aa13.4□□□□□ -0.26
SEM1-201ENST00000248566 DNAI2Q9GZS0 605 aa13.4□□□□□ -0.26
SEM1-201ENST00000248566 DMAP1Q9NPF5 467 aaPredicted RBP13.4□□□□□ -0.26
SEM1-201ENST00000248566 RAB20Q9NX57 234 aa13.4□□□□□ -0.26
SEM1-201ENST00000248566 DUS2Q9NX74 493 aaKnown RBP13.4□□□□□ -0.26
SEM1-201ENST00000248566 ARMCX3Q9UH62 379 aaPredicted RBP13.4□□□□□ -0.26
SEM1-201ENST00000248566 R4GN57 208 aa13.4□□□□□ -0.26
SEM1-201ENST00000248566 PTPRDP23468 1912 aa13.4□□□□□ -0.26
SEM1-201ENST00000248566 MUC6Q6W4X9 2439 aa13.4□□□□□ -0.26
SEM1-201ENST00000248566 COL4A2P08572 1712 aa13.4□□□□□ -0.26
SEM1-201ENST00000248566 SHISA7A6NL88 538 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 SOBPA7XYQ1 873 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 RTN3O95197 1032 aaPredicted RBP13.39□□□□□ -0.27
SEM1-201ENST00000248566 FAM200BP0CF97 657 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 SP9P0CG40 484 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 ARSAP15289 507 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 CTHP32929 405 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 PPP1R2P41236 205 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 MAGEA9P43362 315 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 IFNAR2P48551 515 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 PDE6CP51160 858 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 STX17P56962 302 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 UBE2HP62256 183 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 ENPEPQ07075 957 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 PAQR9Q6ZVX9 377 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 RALGPS2Q86X27 583 aaPredicted RBP13.39□□□□□ -0.27
SEM1-201ENST00000248566 ELOA2Q8IYF1 753 aaPredicted RBP13.39□□□□□ -0.27
SEM1-201ENST00000248566 FUKQ8N0W3 1084 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 CYFIP2Q96F07 1278 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 TWNKQ96RR1 684 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 CYP3A43Q9HB55 503 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 RBM12Q9NTZ6 932 aaKnown RBP13.39□□□□□ -0.27
SEM1-201ENST00000248566 SMPD4Q9NXE4 827 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 CHORDC1Q9UHD1 332 aaPredicted RBP13.39□□□□□ -0.27
SEM1-201ENST00000248566 WNT6Q9Y6F9 365 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 KIF26AQ9ULI4 1882 aaPredicted RBP13.39□□□□□ -0.27
SEM1-201ENST00000248566 GREB1Q4ZG55 1949 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 ZNF840PA6NDX5 716 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 ARHGAP33O14559 1287 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 SCAMP3O14828 347 aaKnown RBP13.39□□□□□ -0.27
SEM1-201ENST00000248566 BEST1O76090 585 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 MBL2P11226 248 aaPredicted RBP13.39□□□□□ -0.27
SEM1-201ENST00000248566 NBL1P41271 181 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 RPS9P46781 194 aaKnown RBP13.39□□□□□ -0.27
SEM1-201ENST00000248566 PPP3CCP48454 512 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 SLC5A3P53794 718 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 LRMPQ12912 555 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 MTAPQ13126 283 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 LRRC32Q14392 662 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 ZNF268Q14587 947 aaPredicted RBP13.39□□□□□ -0.27
SEM1-201ENST00000248566 CBWD6Q4V339 395 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 CBWD3Q5JTY5 395 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 CBWD5Q5RIA9 395 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 C1orf228Q6PIY5 440 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 TXNDC11Q6PKC3 985 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 ADGRD1Q6QNK2 874 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 TSSK4Q6SA08 328 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 CREBRFQ8IUR6 639 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 CRYBG2Q8N1P7 616 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 RIN3Q8TB24 985 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 TATDN2Q93075 761 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 NKD2Q969F2 451 aaPredicted RBP13.39□□□□□ -0.27
SEM1-201ENST00000248566 CLDN23Q96B33 292 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 MSANTD3Q96H12 275 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 HEXIM2Q96MH2 286 aaKnown RBP13.39□□□□□ -0.27
SEM1-201ENST00000248566 SMOQ99835 787 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 FAM83CQ9BQN1 747 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 TTLL2Q9BWV7 592 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 NACA2Q9H009 215 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 GCNT4Q9P109 453 aa13.39□□□□□ -0.27
SEM1-201ENST00000248566 BICDL2A1A5D9 508 aa13.38□□□□□ -0.27
SEM1-201ENST00000248566 PPP1R3GB7ZBB8 358 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms