RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 PEBP4Q96S96 227 aa22.62■■□□□ 1.21
SH2D3A-201ENST00000245908 ADPGKQ9BRR6 497 aa22.62■■□□□ 1.21
SH2D3A-201ENST00000245908 ADAM33Q9BZ11 813 aa22.62■■□□□ 1.21
SH2D3A-201ENST00000245908 IFT122Q9HBG6 1241 aa22.62■■□□□ 1.21
SH2D3A-201ENST00000245908 BATF3Q9NR55 127 aa22.62■■□□□ 1.21
SH2D3A-201ENST00000245908 CHKBQ9Y259 395 aa22.62■■□□□ 1.21
SH2D3A-201ENST00000245908 MCM3APO60318 1980 aa22.62■■□□□ 1.21
SH2D3A-201ENST00000245908 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.62■■□□□ 1.21
SH2D3A-201ENST00000245908 HGSO14964 777 aaPredicted RBP22.62■■□□□ 1.21
SH2D3A-201ENST00000245908 IBSPP21815 317 aaPredicted RBP22.62■■□□□ 1.21
SH2D3A-201ENST00000245908 POU5F1BQ06416 359 aa22.62■■□□□ 1.21
SH2D3A-201ENST00000245908 FAM102AQ5T9C2 384 aaPredicted RBP22.62■■□□□ 1.21
SH2D3A-201ENST00000245908 DLK2Q6UY11 383 aa22.62■■□□□ 1.21
SH2D3A-201ENST00000245908 PALM2Q8IXS6 379 aa22.62■■□□□ 1.21
SH2D3A-201ENST00000245908 C10orf82Q8WW14 230 aa22.62■■□□□ 1.21
SH2D3A-201ENST00000245908 TBC1D31Q96DN5 1066 aa22.62■■□□□ 1.21
SH2D3A-201ENST00000245908 CALN1Q9BXU9 219 aa22.62■■□□□ 1.21
SH2D3A-201ENST00000245908 ATP5HO75947 161 aa22.61■■□□□ 1.21
SH2D3A-201ENST00000245908 FGFR1P11362 822 aa22.61■■□□□ 1.21
SH2D3A-201ENST00000245908 P4HA1P13674 534 aa22.61■■□□□ 1.21
SH2D3A-201ENST00000245908 MSH2P43246 934 aa22.61■■□□□ 1.21
SH2D3A-201ENST00000245908 PHKA2P46019 1235 aa22.61■■□□□ 1.21
SH2D3A-201ENST00000245908 NOMO1Q15155 1222 aa22.61■■□□□ 1.21
SH2D3A-201ENST00000245908 AMHR2Q16671 573 aa22.61■■□□□ 1.21
SH2D3A-201ENST00000245908 TAB3Q8N5C8 712 aaPredicted RBP22.61■■□□□ 1.21
SH2D3A-201ENST00000245908 SPATA18Q8TC71 538 aa22.61■■□□□ 1.21
SH2D3A-201ENST00000245908 ZNF75CPQ92670 426 aaPredicted RBP22.61■■□□□ 1.21
SH2D3A-201ENST00000245908 THOC1Q96FV9 657 aaKnown RBP22.61■■□□□ 1.21
SH2D3A-201ENST00000245908 ASB7Q9H672 318 aa22.61■■□□□ 1.21
SH2D3A-201ENST00000245908 CYLDQ9NQC7 956 aa22.61■■□□□ 1.21
SH2D3A-201ENST00000245908 DCTN3O75935 186 aa22.61■■□□□ 1.21
SH2D3A-201ENST00000245908 ROR1Q01973 937 aa22.61■■□□□ 1.21
SH2D3A-201ENST00000245908 CYP4V2Q6ZWL3 525 aaPredicted RBP22.61■■□□□ 1.21
SH2D3A-201ENST00000245908 AGAP11Q8TF27 550 aa22.61■■□□□ 1.21
SH2D3A-201ENST00000245908 ALKBH8Q96BT7 664 aaKnown RBP22.61■■□□□ 1.21
SH2D3A-201ENST00000245908 ERP27Q96DN0 273 aa22.61■■□□□ 1.21
SH2D3A-201ENST00000245908 CNPY3Q9BT09 278 aa22.61■■□□□ 1.21
SH2D3A-201ENST00000245908 TXNRD2Q9NNW7 524 aa22.61■■□□□ 1.21
SH2D3A-201ENST00000245908 GPD1P21695 349 aa22.6■■□□□ 1.21
SH2D3A-201ENST00000245908 ALDH3A1P30838 453 aa22.6■■□□□ 1.21
SH2D3A-201ENST00000245908 STIP1P31948 543 aaKnown RBP22.6■■□□□ 1.21
SH2D3A-201ENST00000245908 BASP1P80723 227 aaKnown RBP22.6■■□□□ 1.21
SH2D3A-201ENST00000245908 LRRC37BQ96QE4 947 aa22.6■■□□□ 1.21
SH2D3A-201ENST00000245908 PDZD7Q9H5P4 517 aa22.6■■□□□ 1.21
SH2D3A-201ENST00000245908 EBF2Q9HAK2 575 aa22.6■■□□□ 1.21
SH2D3A-201ENST00000245908 TM9SF1O15321 606 aa22.6■■□□□ 1.21
SH2D3A-201ENST00000245908 TXNP10599 105 aaKnown RBP22.6■■□□□ 1.21
SH2D3A-201ENST00000245908 ATP2A2P16615 1042 aaKnown RBP22.6■■□□□ 1.21
SH2D3A-201ENST00000245908 NAA25Q14CX7 972 aa22.6■■□□□ 1.21
SH2D3A-201ENST00000245908 OTOAQ7RTW8 1153 aa22.6■■□□□ 1.21
SH2D3A-201ENST00000245908 IFNLR1Q8IU57 520 aaPredicted RBP22.6■■□□□ 1.21
SH2D3A-201ENST00000245908 BANPQ8N9N5 519 aa22.6■■□□□ 1.21
SH2D3A-201ENST00000245908 L3MBTL3Q96JM7 780 aaPredicted RBP22.6■■□□□ 1.21
SH2D3A-201ENST00000245908 HEXIM2Q96MH2 286 aaKnown RBP22.6■■□□□ 1.21
SH2D3A-201ENST00000245908 MMP19Q99542 508 aa22.6■■□□□ 1.21
SH2D3A-201ENST00000245908 ETNK1Q9HBU6 452 aa22.6■■□□□ 1.21
SH2D3A-201ENST00000245908 C2CD4BA6NLJ0 364 aa22.59■■□□□ 1.21
SH2D3A-201ENST00000245908 ADRA1DP25100 572 aa22.59■■□□□ 1.21
SH2D3A-201ENST00000245908 CDH6P55285 790 aa22.59■■□□□ 1.21
SH2D3A-201ENST00000245908 INCA1Q0VD86 236 aa22.59■■□□□ 1.21
SH2D3A-201ENST00000245908 MMRN1Q13201 1228 aa22.59■■□□□ 1.21
SH2D3A-201ENST00000245908 KCTD2Q14681 263 aa22.59■■□□□ 1.21
SH2D3A-201ENST00000245908 TRNP1Q6NT89 227 aa22.59■■□□□ 1.21
SH2D3A-201ENST00000245908 NPNTQ6UXI9 565 aa22.59■■□□□ 1.21
SH2D3A-201ENST00000245908 VSIG1Q86XK7 387 aa22.59■■□□□ 1.21
SH2D3A-201ENST00000245908 OTUD5Q96G74 571 aa22.59■■□□□ 1.21
SH2D3A-201ENST00000245908 HPDLQ96IR7 371 aa22.59■■□□□ 1.21
SH2D3A-201ENST00000245908 RNPEPQ9H4A4 650 aa22.59■■□□□ 1.21
SH2D3A-201ENST00000245908 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.59■■□□□ 1.21
SH2D3A-201ENST00000245908 BARX2Q9UMQ3 279 aaPredicted RBP22.59■■□□□ 1.21
SH2D3A-201ENST00000245908 STK38LQ9Y2H1 464 aa22.59■■□□□ 1.21
SH2D3A-201ENST00000245908 GRIK3Q13003 919 aa22.59■■□□□ 1.21
SH2D3A-201ENST00000245908 TFDP2Q14188 446 aa22.59■■□□□ 1.21
SH2D3A-201ENST00000245908 KCNJ11Q14654 390 aa22.59■■□□□ 1.21
SH2D3A-201ENST00000245908 SLC10A6Q3KNW5 377 aa22.59■■□□□ 1.21
SH2D3A-201ENST00000245908 FAM47CQ5HY64 1035 aa22.59■■□□□ 1.21
SH2D3A-201ENST00000245908 ZNF484Q5JVG2 852 aa22.59■■□□□ 1.21
SH2D3A-201ENST00000245908 MAP1SQ66K74 1059 aaPredicted RBP22.59■■□□□ 1.21
SH2D3A-201ENST00000245908 DARS2Q6PI48 645 aaKnown RBP22.59■■□□□ 1.21
SH2D3A-201ENST00000245908 ZNF276Q8N554 614 aa22.59■■□□□ 1.21
SH2D3A-201ENST00000245908 UBA3Q8TBC4 463 aa22.59■■□□□ 1.21
SH2D3A-201ENST00000245908 RAB3IPQ96QF0 476 aaPredicted RBP22.59■■□□□ 1.21
SH2D3A-201ENST00000245908 CYTH2Q99418 400 aa22.59■■□□□ 1.21
SH2D3A-201ENST00000245908 LRMDAQ9H2I8 198 aa22.59■■□□□ 1.21
SH2D3A-201ENST00000245908 ELP3Q9H9T3 547 aa22.59■■□□□ 1.21
SH2D3A-201ENST00000245908 ERAP1Q9NZ08 941 aa22.59■■□□□ 1.21
SH2D3A-201ENST00000245908 RBPJLQ9UBG7 517 aa22.59■■□□□ 1.21
SH2D3A-201ENST00000245908 CHMP2BQ9UQN3 213 aa22.59■■□□□ 1.21
SH2D3A-201ENST00000245908 A8MUI8 341 aa22.58■■□□□ 1.21
SH2D3A-201ENST00000245908 PIAS1O75925 651 aa22.58■■□□□ 1.21
SH2D3A-201ENST00000245908 CYP3A5P20815 502 aa22.58■■□□□ 1.21
SH2D3A-201ENST00000245908 NRLP54845 237 aa22.58■■□□□ 1.21
SH2D3A-201ENST00000245908 CBLBQ13191 982 aa22.58■■□□□ 1.21
SH2D3A-201ENST00000245908 SPDYAQ5MJ70 313 aa22.58■■□□□ 1.21
SH2D3A-201ENST00000245908 SH3PXD2AQ5TCZ1 1133 aa22.58■■□□□ 1.21
SH2D3A-201ENST00000245908 WDR78Q5VTH9 848 aa22.58■■□□□ 1.21
SH2D3A-201ENST00000245908 TCP10LQ8TDR4 215 aa22.58■■□□□ 1.21
SH2D3A-201ENST00000245908 RXFP2Q8WXD0 754 aa22.58■■□□□ 1.21
SH2D3A-201ENST00000245908 FAM124BQ9H5Z6 455 aaPredicted RBP22.58■■□□□ 1.21
SH2D3A-201ENST00000245908 A0A087WZ62 844 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms