RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 HASPINQ8TF76 798 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 ZC3H15Q8WU90 426 aaKnown RBP7.78□□□□□ -1.16
RIF1-201ENST00000243326 HES6Q96HZ4 224 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 CNGB3Q9NQW8 809 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 ARP10275 920 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 OXNAD1Q96HP4 312 aaPredicted RBP7.78□□□□□ -1.16
RIF1-201ENST00000243326 TAAR1Q96RJ0 339 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 PDP2Q9P2J9 529 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 IL5RAQ01344 420 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 TCEA2Q15560 299 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 TBCELQ5QJ74 424 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 LZICQ8WZA0 190 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 RPS6KL1Q9Y6S9 549 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 KRT35Q92764 455 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 SERPINB12Q96P63 405 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 CHST12Q9NRB3 414 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 ABCB1P08183 1280 aaPredicted RBP7.78□□□□□ -1.16
RIF1-201ENST00000243326 CCR3P51677 355 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 KRT72Q14CN4 511 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 RABL6Q3YEC7 729 aaPredicted RBP7.78□□□□□ -1.16
RIF1-201ENST00000243326 ACAD10Q6JQN1 1059 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 TULP4Q9NRJ4 1543 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 LOC100506127A0A0U1RQW1 187 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 AKAP3O75969 853 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 PREPLQ4J6C6 727 aaPredicted RBP7.78□□□□□ -1.16
RIF1-201ENST00000243326 CCDC149Q6ZUS6 474 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 BEST2Q8NFU1 509 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 CERKQ8TCT0 537 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 TLR10Q9BXR5 811 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 CABIN1Q9Y6J0 2220 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 ZNF37AP17032 561 aaPredicted RBP7.78□□□□□ -1.16
RIF1-201ENST00000243326 RIBC1Q8N443 379 aaPredicted RBP7.78□□□□□ -1.16
RIF1-201ENST00000243326 ELMO1Q92556 727 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 PLEKHG4BQ96PX9 1271 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 HDHD2Q9H0R4 259 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 ATXN3LQ9H3M9 355 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 CACNA2D2Q9NY47 1150 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 E7ENQ6 273 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 ASAP2O43150 1006 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 KLHL18O94889 574 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 PCP11498 1178 aaKnown RBP7.78□□□□□ -1.16
RIF1-201ENST00000243326 EPB42P16452 691 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 PPIDQ08752 370 aaKnown RBP7.78□□□□□ -1.16
RIF1-201ENST00000243326 HS6ST3Q8IZP7 471 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 ADAM32Q8TC27 787 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 IPPQ9Y573 584 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 SNX8Q9Y5X2 465 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 A0A1W2PQJ5 194 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 PSMG1O95456 288 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 SP100P23497 879 aaPredicted RBP7.78□□□□□ -1.16
RIF1-201ENST00000243326 HMGCS2P54868 508 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 DGKKQ5KSL6 1271 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 KIAA0895Q8NCT3 520 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 ISCA1Q9BUE6 129 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 SLCO1B3Q9NPD5 702 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 IQSEC2Q5JU85 1478 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 INPP4BO15327 924 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 DGCR6Q14129 220 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 ATPAF2Q8N5M1 289 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 CMTM5Q96DZ9 223 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 SPATA33Q96N06 139 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 EPAS1Q99814 870 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 MTMR4Q9NYA4 1195 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 TDRKHQ9Y2W6 561 aaKnown RBP7.78□□□□□ -1.16
RIF1-201ENST00000243326 C5orf58C9J3I9 102 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 CHRM3P20309 590 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 BHLHE22Q8NFJ8 381 aaPredicted RBP7.78□□□□□ -1.16
RIF1-201ENST00000243326 DCPSQ96C86 337 aaKnown RBP7.78□□□□□ -1.16
RIF1-201ENST00000243326 DCXO43602 365 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 LDHAP00338 332 aaKnown RBP7.78□□□□□ -1.16
RIF1-201ENST00000243326 ITGB3P05106 788 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 BMP6P22004 513 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 NCKAP1LP55160 1127 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 OR9Q1Q8NGQ5 310 aa7.78□□□□□ -1.16
RIF1-201ENST00000243326 hCG_1984214I3L0E3 225 aa7.77□□□□□ -1.16
RIF1-201ENST00000243326 MGAT1P26572 445 aa7.77□□□□□ -1.16
RIF1-201ENST00000243326 WLSQ5T9L3 541 aa7.77□□□□□ -1.16
RIF1-201ENST00000243326 SLFN12LQ6IEE8 588 aa7.77□□□□□ -1.16
RIF1-201ENST00000243326 ZNF713Q8N859 430 aaPredicted RBP7.77□□□□□ -1.16
RIF1-201ENST00000243326 CYP2W1Q8TAV3 490 aa7.77□□□□□ -1.16
RIF1-201ENST00000243326 TAS1R2Q8TE23 839 aa7.77□□□□□ -1.16
RIF1-201ENST00000243326 KAT5Q92993 513 aa7.77□□□□□ -1.16
RIF1-201ENST00000243326 SH3KBP1Q96B97 665 aa7.77□□□□□ -1.16
RIF1-201ENST00000243326 PRR23AA6NEV1 266 aa7.77□□□□□ -1.16
RIF1-201ENST00000243326 GARTP22102 1010 aa7.77□□□□□ -1.16
RIF1-201ENST00000243326 SLC34A1Q06495 639 aa7.77□□□□□ -1.16
RIF1-201ENST00000243326 MAPRE2Q15555 327 aa7.77□□□□□ -1.16
RIF1-201ENST00000243326 GPR107Q5VW38 600 aa7.77□□□□□ -1.16
RIF1-201ENST00000243326 PLEKHM3Q6ZWE6 761 aa7.77□□□□□ -1.16
RIF1-201ENST00000243326 ARMCX2Q7L311 632 aa7.77□□□□□ -1.16
RIF1-201ENST00000243326 FAM155BO75949 473 aa7.77□□□□□ -1.17
RIF1-201ENST00000243326 RAD23AP54725 363 aa7.77□□□□□ -1.17
RIF1-201ENST00000243326 ZNF543Q08ER8 600 aa7.77□□□□□ -1.17
RIF1-201ENST00000243326 LPCAT4Q643R3 524 aa7.77□□□□□ -1.17
RIF1-201ENST00000243326 KAZALD1Q96I82 304 aa7.77□□□□□ -1.17
RIF1-201ENST00000243326 CDRT15Q96T59 188 aa7.77□□□□□ -1.17
RIF1-201ENST00000243326 MAN1C1Q9NR34 630 aa7.77□□□□□ -1.17
RIF1-201ENST00000243326 PIN4Q9Y237 131 aaKnown RBP7.77□□□□□ -1.17
RIF1-201ENST00000243326 TXNP10599 105 aaKnown RBP7.77□□□□□ -1.17
RIF1-201ENST00000243326 SUGP1Q8IWZ8 645 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms