RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 PRPF39Q86UA1 669 aaKnown RBP14.75□□□□□ -0.05
PCDHB3-201ENST00000231130 ALLCQ8N6M5 410 aa14.75□□□□□ -0.05
PCDHB3-201ENST00000231130 ATP11CQ8NB49 1132 aa14.75□□□□□ -0.05
PCDHB3-201ENST00000231130 FEZF2Q8TBJ5 459 aa14.75□□□□□ -0.05
PCDHB3-201ENST00000231130 CEP170P1Q96L14 293 aa14.75□□□□□ -0.05
PCDHB3-201ENST00000231130 SLITRK1Q96PX8 696 aa14.75□□□□□ -0.05
PCDHB3-201ENST00000231130 MXRA8Q9BRK3 442 aa14.75□□□□□ -0.05
PCDHB3-201ENST00000231130 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.75□□□□□ -0.05
PCDHB3-201ENST00000231130 F5H423 210 aaPredicted RBP14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 CAPN15O75808 1086 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 VCLP18206 1134 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 NFKBIAP25963 317 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 TMED10P49755 219 aaKnown RBP14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 WNT7BP56706 349 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 RNASEH2BQ5TBB1 312 aaKnown RBP14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 KLHL35Q6PF15 583 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 SCARA5Q6ZMJ2 495 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 SPOCD1Q6ZMY3 1216 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 C15orf52Q6ZUT6 534 aaKnown RBP14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 BSNDQ8WZ55 320 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 ZNF516Q92618 1163 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 NGLY1Q96IV0 654 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 SENP7Q9BQF6 1050 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 MRPL1Q9BYD6 325 aaKnown RBP14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 RANBP17Q9H2T7 1088 aaKnown RBP14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 EHMT1Q9H9B1 1298 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 LIN28AQ9H9Z2 209 aaKnown RBP14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 XPO7Q9UIA9 1087 aaKnown RBP14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 CCPG1Q9ULG6 757 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 EXOC7Q9UPT5 735 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 ATRNL1Q5VV63 1379 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 TMEM221A6NGB7 291 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 PSTPIP1O43586 416 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 XPOTO43592 962 aaKnown RBP14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 HOXD12P35452 270 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 GTF2BQ00403 316 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 CYP24A1Q07973 514 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 SFT2D3Q587I9 215 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 PPP1R14CQ8TAE6 165 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 PTCD3Q96EY7 689 aaKnown RBP14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 CALN1Q9BXU9 219 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 PTTG2Q9NZH5 202 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 KCND2Q9NZV8 630 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 LAMB2P55268 1798 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 SPATA31A5Q5VU36 1347 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 SPATA31A6Q5VVP1 1343 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 SPATA31A7Q8IWB4 1347 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 TRAFD1O14545 582 aaPredicted RBP14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 TOP3BO95985 862 aaKnown RBP14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 TFPTP0C1Z6 253 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 UBAP2LQ14157 1087 aaKnown RBP14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 MORF4L2Q15014 288 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 DNAJC24Q6P3W2 148 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 ACAD11Q709F0 780 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 MON1BQ7L1V2 547 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 KATNAL2Q8IYT4 538 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 PDIK1LQ8N165 341 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 GSTCDQ8NEC7 633 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 ZBTB45Q96K62 511 aaPredicted RBP14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 GLIS2Q9BZE0 524 aaPredicted RBP14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 CYLDQ9NQC7 956 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 COL20A1Q9P218 1284 aa14.74□□□□□ -0.05
PCDHB3-201ENST00000231130 I3L4J1 428 aa14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 COPEO14579 308 aa14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 SORBS2O94875 1100 aaKnown RBP14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 VARSP26640 1264 aaKnown RBP14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 ELK3P41970 407 aa14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 AQP5P55064 265 aa14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 VCPP55072 806 aaKnown RBP14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 OXCT1P55809 520 aa14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 SLC25A3Q00325 362 aa14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 MTMR1Q13613 665 aa14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 TMEM53Q6P2H8 277 aa14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 PAOXQ6QHF9 649 aa14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 IGDCC3Q8IVU1 814 aa14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 GMCL1Q96IK5 515 aa14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 KCNK13Q9HB14 408 aa14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 MRPL11Q9Y3B7 192 aaKnown RBP14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 KIF13BQ9NQT8 1826 aa14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 CDK5RAP2Q96SN8 1893 aa14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 LOC100653049A0A140TA62 436 aa14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 E2F8A0AVK6 867 aa14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 DCAF8L1A6NGE4 600 aa14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 KRT34O76011 436 aa14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 CDHR3Q6ZTQ4 885 aa14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 OGFOD1Q8N543 542 aa14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 CCDC33Q8N5R6 958 aa14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 EMC1Q8N766 993 aa14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 ICA1LQ8NDH6 482 aa14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 TMEM161BQ8NDZ6 487 aa14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 GIPC3Q8TF64 312 aa14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 GDPD5Q8WTR4 605 aa14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 HSPH1Q92598 858 aa14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 CNBD2Q96M20 576 aa14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 TRIM56Q9BRZ2 755 aaKnown RBP14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 SLC24A2Q9UI40 661 aa14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 MTO1Q9Y2Z2 717 aaKnown RBP14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 HEY1Q9Y5J3 304 aa14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 TMEM247A6NEH6 219 aa14.73□□□□□ -0.05
PCDHB3-201ENST00000231130 TRIM49D1C9J1S8 452 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms