RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 RAB6CQ9H0N0 254 aa15.99■□□□□ 0.15
TGFB1-201ENST00000221930 SDCBP2Q9H190 292 aa15.99■□□□□ 0.15
TGFB1-201ENST00000221930 SMYD3Q9H7B4 428 aa15.99■□□□□ 0.15
TGFB1-201ENST00000221930 ALG13Q9NP73 1137 aaKnown RBP15.99■□□□□ 0.15
TGFB1-201ENST00000221930 SIX4Q9UIU6 781 aa15.99■□□□□ 0.15
TGFB1-201ENST00000221930 SMG5Q9UPR3 1016 aaKnown RBP15.99■□□□□ 0.15
TGFB1-201ENST00000221930 NOP56O00567 594 aaKnown RBP15.98■□□□□ 0.15
TGFB1-201ENST00000221930 CXCL11O14625 94 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 MAGEB2O15479 319 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 NFICP08651 508 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 KRT7P08729 469 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 IQCF3P0C7M6 154 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 ADRA1DP25100 572 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 POLR2BP30876 1174 aaKnown RBP15.98■□□□□ 0.15
TGFB1-201ENST00000221930 CLCN3P51790 818 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 RAD23BP54727 409 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 ARL4CP56559 192 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 MXD4Q14582 209 aaPredicted RBP15.98■□□□□ 0.15
TGFB1-201ENST00000221930 MPZL3Q6UWV2 235 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 RFX6Q8HWS3 928 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 NAT8LQ8N9F0 302 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 LRRC37BQ96QE4 947 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 PAFAH2Q99487 392 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 HAO1Q9UJM8 370 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 EDF1O60869 148 aaKnown RBP15.98■□□□□ 0.15
TGFB1-201ENST00000221930 ANP32DO95626 131 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 CCNB1P14635 433 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 MIPP30301 263 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 IREB2P48200 963 aaKnown RBP15.98■□□□□ 0.15
TGFB1-201ENST00000221930 MMRN1Q13201 1228 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 HADHQ16836 314 aaKnown RBP15.98■□□□□ 0.15
TGFB1-201ENST00000221930 EFHC2Q5JST6 749 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 NPNTQ6UXI9 565 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 BBS12Q6ZW61 710 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 ARMCX6Q7L4S7 300 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 ZC3H18Q86VM9 953 aaKnown RBP15.98■□□□□ 0.15
TGFB1-201ENST00000221930 XYLT1Q86Y38 959 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 DCPSQ96C86 337 aaKnown RBP15.98■□□□□ 0.15
TGFB1-201ENST00000221930 L3MBTL3Q96JM7 780 aaPredicted RBP15.98■□□□□ 0.15
TGFB1-201ENST00000221930 TSPAN18Q96SJ8 248 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 SLC24A2Q9UI40 661 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 EDNRBP24530 442 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 VGLL4Q14135 290 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 ZNF449Q6P9G9 518 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 PALM2Q8IXS6 379 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 NSMCE1Q8WV22 266 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 ZFAND2BQ8WV99 257 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 UTP4Q969X6 686 aaKnown RBP15.98■□□□□ 0.15
TGFB1-201ENST00000221930 SENP1Q9P0U3 644 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 CSADQ9Y600 493 aa15.98■□□□□ 0.15
TGFB1-201ENST00000221930 EIF3EP60228 445 aaKnown RBP15.97■□□□□ 0.15
TGFB1-201ENST00000221930 ZNF667Q5HYK9 610 aa15.97■□□□□ 0.15
TGFB1-201ENST00000221930 USP50Q70EL3 339 aaPredicted RBP15.97■□□□□ 0.15
TGFB1-201ENST00000221930 ARHGAP22Q7Z5H3 698 aa15.97■□□□□ 0.15
TGFB1-201ENST00000221930 IGDCC3Q8IVU1 814 aa15.97■□□□□ 0.15
TGFB1-201ENST00000221930 C1orf127Q8N9H9 656 aa15.97■□□□□ 0.15
TGFB1-201ENST00000221930 ATP11CQ8NB49 1132 aa15.97■□□□□ 0.15
TGFB1-201ENST00000221930 SPATA18Q8TC71 538 aa15.97■□□□□ 0.15
TGFB1-201ENST00000221930 ZNF75CPQ92670 426 aaPredicted RBP15.97■□□□□ 0.15
TGFB1-201ENST00000221930 COPS5Q92905 334 aa15.97■□□□□ 0.15
TGFB1-201ENST00000221930 GPR20Q99678 358 aa15.97■□□□□ 0.15
TGFB1-201ENST00000221930 SPATC1LQ9H0A9 340 aa15.97■□□□□ 0.15
TGFB1-201ENST00000221930 PTPRHQ9HD43 1115 aa15.97■□□□□ 0.15
TGFB1-201ENST00000221930 XPO7Q9UIA9 1087 aaKnown RBP15.97■□□□□ 0.15
TGFB1-201ENST00000221930 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.97■□□□□ 0.15
TGFB1-201ENST00000221930 CHMP2BQ9UQN3 213 aa15.97■□□□□ 0.15
TGFB1-201ENST00000221930 USH1CQ9Y6N9 552 aa15.97■□□□□ 0.15
TGFB1-201ENST00000221930 ITGB3P05106 788 aa15.97■□□□□ 0.15
TGFB1-201ENST00000221930 RBP3P10745 1247 aa15.97■□□□□ 0.15
TGFB1-201ENST00000221930 ALADP13716 330 aa15.97■□□□□ 0.15
TGFB1-201ENST00000221930 RANBP1P43487 201 aa15.97■□□□□ 0.15
TGFB1-201ENST00000221930 YARSP54577 528 aaKnown RBP15.97■□□□□ 0.15
TGFB1-201ENST00000221930 OVGP1Q12889 678 aa15.97■□□□□ 0.15
TGFB1-201ENST00000221930 MTHFD1LQ6UB35 978 aa15.97■□□□□ 0.15
TGFB1-201ENST00000221930 OTOAQ7RTW8 1153 aa15.97■□□□□ 0.15
TGFB1-201ENST00000221930 PCGF5Q86SE9 256 aa15.97■□□□□ 0.15
TGFB1-201ENST00000221930 SLC4A11Q8NBS3 891 aa15.97■□□□□ 0.15
TGFB1-201ENST00000221930 UBA3Q8TBC4 463 aa15.97■□□□□ 0.15
TGFB1-201ENST00000221930 ASCC2Q9H1I8 757 aaPredicted RBP15.97■□□□□ 0.15
TGFB1-201ENST00000221930 NPHS2Q9NP85 383 aa15.97■□□□□ 0.15
TGFB1-201ENST00000221930 PAPOLBQ9NRJ5 636 aaKnown RBP15.97■□□□□ 0.15
TGFB1-201ENST00000221930 MGAMO43451 1857 aa15.96■□□□□ 0.15
TGFB1-201ENST00000221930 A0A0G2JLL6 359 aaPredicted RBP15.96■□□□□ 0.15
TGFB1-201ENST00000221930 ACKR2O00590 384 aa15.96■□□□□ 0.15
TGFB1-201ENST00000221930 B4GALT4O60513 344 aa15.96■□□□□ 0.15
TGFB1-201ENST00000221930 GRAP2O75791 330 aa15.96■□□□□ 0.15
TGFB1-201ENST00000221930 PROZP22891 400 aa15.96■□□□□ 0.15
TGFB1-201ENST00000221930 PHBP35232 272 aa15.96■□□□□ 0.15
TGFB1-201ENST00000221930 IGBP1P78318 339 aa15.96■□□□□ 0.15
TGFB1-201ENST00000221930 RNASELQ05823 741 aaKnown RBP15.96■□□□□ 0.15
TGFB1-201ENST00000221930 SURF1Q15526 300 aa15.96■□□□□ 0.15
TGFB1-201ENST00000221930 PRRT2Q7Z6L0 340 aaPredicted RBP15.96■□□□□ 0.15
TGFB1-201ENST00000221930 MYLK4Q86YV6 388 aaPredicted RBP15.96■□□□□ 0.15
TGFB1-201ENST00000221930 SULF1Q8IWU6 871 aa15.96■□□□□ 0.15
TGFB1-201ENST00000221930 TCP10LQ8TDR4 215 aa15.96■□□□□ 0.15
TGFB1-201ENST00000221930 MPHOSPH6Q99547 160 aaKnown RBP15.96■□□□□ 0.15
TGFB1-201ENST00000221930 YIPF3Q9GZM5 350 aa15.96■□□□□ 0.15
TGFB1-201ENST00000221930 CDT1Q9H211 546 aa15.96■□□□□ 0.15
TGFB1-201ENST00000221930 LHX5Q9H2C1 402 aa15.96■□□□□ 0.15
TGFB1-201ENST00000221930 SLC17A7Q9P2U7 560 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms