RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 BORAQ6PGQ7 559 aa14.21□□□□□ -0.14
GABPB1-201ENST00000220429 DHRS4L2Q6PKH6 230 aa14.21□□□□□ -0.14
GABPB1-201ENST00000220429 PEX26Q7Z412 305 aa14.21□□□□□ -0.14
GABPB1-201ENST00000220429 VPS36Q86VN1 386 aa14.21□□□□□ -0.14
GABPB1-201ENST00000220429 LRRC6Q86X45 466 aa14.21□□□□□ -0.14
GABPB1-201ENST00000220429 PPP4R1Q8TF05 950 aa14.21□□□□□ -0.14
GABPB1-201ENST00000220429 NSL1Q96IY1 281 aa14.21□□□□□ -0.14
GABPB1-201ENST00000220429 KLHL4Q9C0H6 718 aa14.21□□□□□ -0.14
GABPB1-201ENST00000220429 GPR88Q9GZN0 384 aa14.21□□□□□ -0.14
GABPB1-201ENST00000220429 INTS2Q9H0H0 1204 aaKnown RBP14.21□□□□□ -0.14
GABPB1-201ENST00000220429 PCIF1Q9H4Z3 704 aa14.21□□□□□ -0.14
GABPB1-201ENST00000220429 ARMC7Q9H6L4 198 aa14.21□□□□□ -0.14
GABPB1-201ENST00000220429 ARL8BQ9NVJ2 186 aa14.21□□□□□ -0.14
GABPB1-201ENST00000220429 TAS2R1Q9NYW7 299 aa14.21□□□□□ -0.14
GABPB1-201ENST00000220429 GRHL1Q9NZI5 618 aa14.21□□□□□ -0.14
GABPB1-201ENST00000220429 PPP1R1BQ9UD71 204 aaPredicted RBP14.21□□□□□ -0.14
GABPB1-201ENST00000220429 FZD1Q9UP38 647 aa14.21□□□□□ -0.14
GABPB1-201ENST00000220429 SNX9Q9Y5X1 595 aa14.21□□□□□ -0.14
GABPB1-201ENST00000220429 IVNS1ABPQ9Y6Y0 642 aa14.21□□□□□ -0.14
GABPB1-201ENST00000220429 CFAP69A5D8W1 941 aa14.2□□□□□ -0.14
GABPB1-201ENST00000220429 C2CD2LO14523 706 aa14.2□□□□□ -0.14
GABPB1-201ENST00000220429 FUCA1P04066 466 aa14.2□□□□□ -0.14
GABPB1-201ENST00000220429 PLS3P13797 630 aa14.2□□□□□ -0.14
GABPB1-201ENST00000220429 CDH3P22223 829 aa14.2□□□□□ -0.14
GABPB1-201ENST00000220429 SOX5P35711 763 aa14.2□□□□□ -0.14
GABPB1-201ENST00000220429 PGM1P36871 562 aa14.2□□□□□ -0.14
GABPB1-201ENST00000220429 PPARGP37231 505 aaPredicted RBP14.2□□□□□ -0.14
GABPB1-201ENST00000220429 BACE1P56817 501 aa14.2□□□□□ -0.14
GABPB1-201ENST00000220429 DRAP1Q14919 205 aaPredicted RBP14.2□□□□□ -0.14
GABPB1-201ENST00000220429 ANKDD1AQ495B1 522 aa14.2□□□□□ -0.14
GABPB1-201ENST00000220429 CCSAPQ6IQ19 270 aaPredicted RBP14.2□□□□□ -0.14
GABPB1-201ENST00000220429 DCDC5Q6ZRR9 648 aa14.2□□□□□ -0.14
GABPB1-201ENST00000220429 TRMT1LQ7Z2T5 733 aaKnown RBP14.2□□□□□ -0.14
GABPB1-201ENST00000220429 JAMLQ86YT9 394 aa14.2□□□□□ -0.14
GABPB1-201ENST00000220429 NUP85Q9BW27 656 aa14.2□□□□□ -0.14
GABPB1-201ENST00000220429 TBC1D23Q9NUY8 699 aa14.2□□□□□ -0.14
GABPB1-201ENST00000220429 RRN3Q9NYV6 651 aa14.2□□□□□ -0.14
GABPB1-201ENST00000220429 CLEC11AQ9Y240 323 aa14.2□□□□□ -0.14
GABPB1-201ENST00000220429 EDF1O60869 148 aaKnown RBP14.2□□□□□ -0.14
GABPB1-201ENST00000220429 DNAJC6O75061 913 aa14.2□□□□□ -0.14
GABPB1-201ENST00000220429 PTPN2P17706 415 aa14.2□□□□□ -0.14
GABPB1-201ENST00000220429 MZF1P28698 734 aaPredicted RBP14.2□□□□□ -0.14
GABPB1-201ENST00000220429 RAP1GDS1P52306 607 aa14.2□□□□□ -0.14
GABPB1-201ENST00000220429 MYL7Q01449 175 aa14.2□□□□□ -0.14
GABPB1-201ENST00000220429 ZNF410Q86VK4 478 aa14.2□□□□□ -0.14
GABPB1-201ENST00000220429 C4orf19Q8IY42 314 aa14.2□□□□□ -0.14
GABPB1-201ENST00000220429 LNX1Q8TBB1 728 aaPredicted RBP14.2□□□□□ -0.14
GABPB1-201ENST00000220429 SPOCK2Q92563 424 aa14.2□□□□□ -0.14
GABPB1-201ENST00000220429 FAM161BQ96MY7 647 aa14.2□□□□□ -0.14
GABPB1-201ENST00000220429 CBWD1Q9BRT8 395 aa14.2□□□□□ -0.14
GABPB1-201ENST00000220429 OSBPL6Q9BZF3 934 aa14.2□□□□□ -0.14
GABPB1-201ENST00000220429 UBN1Q9NPG3 1134 aa14.2□□□□□ -0.14
GABPB1-201ENST00000220429 GPRC5CQ9NQ84 441 aa14.2□□□□□ -0.14
GABPB1-201ENST00000220429 RNF146Q9NTX7 359 aa14.2□□□□□ -0.14
GABPB1-201ENST00000220429 PARP2Q9UGN5 583 aa14.2□□□□□ -0.14
GABPB1-201ENST00000220429 LZTS1Q9Y250 596 aa14.2□□□□□ -0.14
GABPB1-201ENST00000220429 RBMX2Q9Y388 322 aaKnown RBP14.2□□□□□ -0.14
GABPB1-201ENST00000220429 TESPA1A2RU30 521 aaPredicted RBP14.19□□□□□ -0.14
GABPB1-201ENST00000220429 NOTOA8MTQ0 251 aa14.19□□□□□ -0.14
GABPB1-201ENST00000220429 TXNDC9O14530 226 aa14.19□□□□□ -0.14
GABPB1-201ENST00000220429 ZNF12P17014 697 aa14.19□□□□□ -0.14
GABPB1-201ENST00000220429 PHKA2P46019 1235 aa14.19□□□□□ -0.14
GABPB1-201ENST00000220429 CSE1LP55060 971 aaKnown RBP14.19□□□□□ -0.14
GABPB1-201ENST00000220429 DLG4P78352 724 aa14.19□□□□□ -0.14
GABPB1-201ENST00000220429 ALCAMQ13740 583 aa14.19□□□□□ -0.14
GABPB1-201ENST00000220429 BAATQ14032 418 aaPredicted RBP14.19□□□□□ -0.14
GABPB1-201ENST00000220429 DHX34Q14147 1143 aaKnown RBP14.19□□□□□ -0.14
GABPB1-201ENST00000220429 LRRC36Q1X8D7 754 aa14.19□□□□□ -0.14
GABPB1-201ENST00000220429 ARHGEF16Q5VV41 709 aa14.19□□□□□ -0.14
GABPB1-201ENST00000220429 PRAMEF18Q5VWM3 479 aa14.19□□□□□ -0.14
GABPB1-201ENST00000220429 SPOPLQ6IQ16 392 aa14.19□□□□□ -0.14
GABPB1-201ENST00000220429 ELMSAN1Q6PJG2 1045 aa14.19□□□□□ -0.14
GABPB1-201ENST00000220429 ZSWIM2Q8NEG5 633 aa14.19□□□□□ -0.14
GABPB1-201ENST00000220429 LMO3Q8TAP4 145 aa14.19□□□□□ -0.14
GABPB1-201ENST00000220429 ACCSQ96QU6 501 aa14.19□□□□□ -0.14
GABPB1-201ENST00000220429 MRPL1Q9BYD6 325 aaKnown RBP14.19□□□□□ -0.14
GABPB1-201ENST00000220429 MRPS26Q9BYN8 205 aaKnown RBP14.19□□□□□ -0.14
GABPB1-201ENST00000220429 TMEM206Q9H813 350 aa14.19□□□□□ -0.14
GABPB1-201ENST00000220429 APEX2Q9UBZ4 518 aa14.19□□□□□ -0.14
GABPB1-201ENST00000220429 PPM1HQ9ULR3 514 aa14.19□□□□□ -0.14
GABPB1-201ENST00000220429 BCS1LQ9Y276 419 aa14.19□□□□□ -0.14
GABPB1-201ENST00000220429 HEMK1Q9Y5R4 338 aaPredicted RBP14.19□□□□□ -0.14
GABPB1-201ENST00000220429 ATP8B3O60423 1300 aa14.19□□□□□ -0.14
GABPB1-201ENST00000220429 ANKRD34BA5PLL1 514 aa14.19□□□□□ -0.14
GABPB1-201ENST00000220429 TEX28O15482 410 aa14.19□□□□□ -0.14
GABPB1-201ENST00000220429 CDH2P19022 906 aaPredicted RBP14.19□□□□□ -0.14
GABPB1-201ENST00000220429 MXI1P50539 228 aa14.19□□□□□ -0.14
GABPB1-201ENST00000220429 ERFP50548 548 aa14.19□□□□□ -0.14
GABPB1-201ENST00000220429 NPEPPSP55786 919 aa14.19□□□□□ -0.14
GABPB1-201ENST00000220429 WDR4P57081 412 aaKnown RBP14.19□□□□□ -0.14
GABPB1-201ENST00000220429 RPL26P61254 145 aaKnown RBP14.19□□□□□ -0.14
GABPB1-201ENST00000220429 TUBA1BP68363 451 aa14.19□□□□□ -0.14
GABPB1-201ENST00000220429 PDAP1Q13442 181 aaKnown RBP14.19□□□□□ -0.14
GABPB1-201ENST00000220429 PLA2G4FQ68DD2 849 aa14.19□□□□□ -0.14
GABPB1-201ENST00000220429 TUBA1AQ71U36 451 aa14.19□□□□□ -0.14
GABPB1-201ENST00000220429 REPS2Q8NFH8 660 aa14.19□□□□□ -0.14
GABPB1-201ENST00000220429 SLC30A5Q8TAD4 765 aa14.19□□□□□ -0.14
GABPB1-201ENST00000220429 EFHD2Q96C19 240 aaPredicted RBP14.19□□□□□ -0.14
GABPB1-201ENST00000220429 BIRC8Q96P09 236 aa14.19□□□□□ -0.14
GABPB1-201ENST00000220429 ZNF112Q9UJU3 913 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms