RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Zkscan3Q91VW9 553 aa16.61■□□□□ 0.25
Trim39-203ENSMUST00000113706 Pomgnt1Q91X88 660 aa16.61■□□□□ 0.25
Trim39-203ENSMUST00000113706 Pcdha10Q91Y20 946 aa16.61■□□□□ 0.25
Trim39-203ENSMUST00000113706 Xpo6Q924Z6 1125 aa16.61■□□□□ 0.25
Trim39-203ENSMUST00000113706 MtrexQ9CZU3 1040 aaKnown RBP16.61■□□□□ 0.25
Trim39-203ENSMUST00000113706 Dgcr8Q9EQM6 773 aa16.61■□□□□ 0.25
Trim39-203ENSMUST00000113706 Actn2Q9JI91 894 aa16.61■□□□□ 0.25
Trim39-203ENSMUST00000113706 Rnf4Q9QZS2 194 aa16.61■□□□□ 0.25
Trim39-203ENSMUST00000113706 AspgA0JNU3 564 aa16.6■□□□□ 0.25
Trim39-203ENSMUST00000113706 Casq2O09161 415 aa16.6■□□□□ 0.25
Trim39-203ENSMUST00000113706 Kif5cP28738 956 aaKnown RBP16.6■□□□□ 0.25
Trim39-203ENSMUST00000113706 Aars2Q14CH7 980 aa16.6■□□□□ 0.25
Trim39-203ENSMUST00000113706 Cyp2c29Q64458 490 aa16.6■□□□□ 0.25
Trim39-203ENSMUST00000113706 Dnajc16Q80TN4 772 aa16.6■□□□□ 0.25
Trim39-203ENSMUST00000113706 Ugp2Q91ZJ5 508 aa16.6■□□□□ 0.25
Trim39-203ENSMUST00000113706 Pcsk1nQ9QXV0 258 aa16.6■□□□□ 0.25
Trim39-203ENSMUST00000113706 PfkmP47857 780 aaKnown RBP16.6■□□□□ 0.25
Trim39-203ENSMUST00000113706 Shox2P70390 331 aa16.6■□□□□ 0.25
Trim39-203ENSMUST00000113706 Gm13103Q4VAD2 491 aa16.6■□□□□ 0.25
Trim39-203ENSMUST00000113706 2700097O09RikQ6PGK3 301 aa16.6■□□□□ 0.25
Trim39-203ENSMUST00000113706 Sh2d5Q8JZW5 429 aa16.6■□□□□ 0.25
Trim39-203ENSMUST00000113706 Gle1Q8R322 699 aa16.6■□□□□ 0.25
Trim39-203ENSMUST00000113706 Adamts9E9PUN6 1931 aa16.6■□□□□ 0.25
Trim39-203ENSMUST00000113706 Lonrf1D3YY23 762 aa16.6■□□□□ 0.25
Trim39-203ENSMUST00000113706 Xbp1O35426 267 aa16.6■□□□□ 0.25
Trim39-203ENSMUST00000113706 Adamts19P59509 1210 aa16.6■□□□□ 0.25
Trim39-203ENSMUST00000113706 Lipo3Q3UT41 399 aa16.6■□□□□ 0.25
Trim39-203ENSMUST00000113706 Dpysl3Q62188 570 aa16.6■□□□□ 0.25
Trim39-203ENSMUST00000113706 Syn2Q64332 586 aa16.6■□□□□ 0.25
Trim39-203ENSMUST00000113706 Stk40Q7TNL3 435 aa16.6■□□□□ 0.25
Trim39-203ENSMUST00000113706 PhkbQ7TSH2 1085 aa16.6■□□□□ 0.25
Trim39-203ENSMUST00000113706 BlmhQ8R016 455 aa16.6■□□□□ 0.25
Trim39-203ENSMUST00000113706 Wdr98Q8VC42 657 aa16.6■□□□□ 0.25
Trim39-203ENSMUST00000113706 Sec14l2Q99J08 403 aa16.6■□□□□ 0.25
Trim39-203ENSMUST00000113706 Chordc1Q9D1P4 331 aaKnown RBP16.6■□□□□ 0.25
Trim39-203ENSMUST00000113706 Gkap1Q9JMB0 366 aa16.6■□□□□ 0.25
Trim39-203ENSMUST00000113706 Gabbr1Q9WV18 960 aa16.6■□□□□ 0.25
Trim39-203ENSMUST00000113706 Tubb1A2AQ07 451 aa16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 Rdh7O88451 316 aa16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 AlbP07724 608 aa16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 Creb1Q01147 341 aaKnown RBP16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 VcpQ01853 806 aaKnown RBP16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 GsapQ3TCV3 858 aa16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 Echdc2Q3TLP5 296 aa16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 9130409I23RikQ3TS87 320 aa16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 Gabbr2Q80T41 940 aa16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 Lrfn2Q80TG9 788 aa16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 CyldQ80TQ2 952 aa16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 Mcur1Q9CXD6 340 aa16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 Ebag9Q9D0V7 213 aa16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 Gfra4Q9JJT2 260 aa16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 St6galnac4Q9R2B6 360 aa16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 Gm10720D3Z1I5 223 aa16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 Adgrf2E9Q4J9 644 aa16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 Gm3460E9QAI8 215 aa16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 Olfr731F8VQB9 326 aa16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 XntrpcF8VQM8 1264 aa16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 Gm7995L7N2E4 160 aa16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 CopeO89079 308 aa16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 Vti1aO89116 217 aa16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 Tex35Q14BK3 207 aa16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 Rab34Q64008 259 aa16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 Zdhhc19Q810M5 347 aa16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 Dupd1Q8BK84 215 aa16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 Stau2Q8CJ67 570 aaKnown RBP16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 Il36gQ8R460 164 aa16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 Tdrd12Q9CWU0 1215 aa16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 Mgea5Q9EQQ9 916 aa16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 Caln1Q9JJG7 219 aa16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 Tnni1Q9WUZ5 187 aa16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 Snx1Q9WV80 522 aa16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 Krt27Q9Z320 448 aa16.59■□□□□ 0.25
Trim39-203ENSMUST00000113706 Aff1O88573 1216 aa16.58■□□□□ 0.25
Trim39-203ENSMUST00000113706 Hoxb8P09632 243 aa16.58■□□□□ 0.25
Trim39-203ENSMUST00000113706 Soat1Q61263 540 aa16.58■□□□□ 0.25
Trim39-203ENSMUST00000113706 Tas2r125Q7M710 311 aa16.58■□□□□ 0.25
Trim39-203ENSMUST00000113706 Vmn2r43Q80Z08 845 aa16.58■□□□□ 0.25
Trim39-203ENSMUST00000113706 EmsyQ8BMB0 1264 aaKnown RBP16.58■□□□□ 0.25
Trim39-203ENSMUST00000113706 Trub1Q8C0D0 338 aaKnown RBP16.58■□□□□ 0.25
Trim39-203ENSMUST00000113706 NamptQ99KQ4 491 aa16.58■□□□□ 0.25
Trim39-203ENSMUST00000113706 Ralgps2Q9ERD6 590 aa16.58■□□□□ 0.25
Trim39-203ENSMUST00000113706 Gm45713A0A1B0GS68 446 aa16.58■□□□□ 0.24
Trim39-203ENSMUST00000113706 Pex10B1AUE5 324 aa16.58■□□□□ 0.24
Trim39-203ENSMUST00000113706 Gm5795E9PZN8 263 aa16.58■□□□□ 0.24
Trim39-203ENSMUST00000113706 Rbm20Q3UQS8 1199 aaKnown RBP16.58■□□□□ 0.24
Trim39-203ENSMUST00000113706 EfsQ64355 560 aa16.58■□□□□ 0.24
Trim39-203ENSMUST00000113706 Lig4Q8BTF7 911 aa16.58■□□□□ 0.24
Trim39-203ENSMUST00000113706 Arhgef33Q8BW86 850 aa16.58■□□□□ 0.24
Trim39-203ENSMUST00000113706 Timd2Q8R183 305 aa16.58■□□□□ 0.24
Trim39-203ENSMUST00000113706 KynuQ9CXF0 464 aa16.58■□□□□ 0.24
Trim39-203ENSMUST00000113706 Gm42688A0A0R3P9D1 673 aa16.58■□□□□ 0.24
Trim39-203ENSMUST00000113706 Cyp2b13A6H6J2 491 aa16.58■□□□□ 0.24
Trim39-203ENSMUST00000113706 St3gal1P54751 337 aa16.58■□□□□ 0.24
Trim39-203ENSMUST00000113706 Fam172aQ3TNH5 417 aa16.58■□□□□ 0.24
Trim39-203ENSMUST00000113706 FaxcQ3UMF9 409 aa16.58■□□□□ 0.24
Trim39-203ENSMUST00000113706 AcrbpQ3V140 540 aa16.58■□□□□ 0.24
Trim39-203ENSMUST00000113706 Fcrl5Q68SN8 596 aa16.58■□□□□ 0.24
Trim39-203ENSMUST00000113706 Q6DFW0 481 aa16.58■□□□□ 0.24
Trim39-203ENSMUST00000113706 Kiaa1328Q6NZK5 612 aa16.58■□□□□ 0.24
Trim39-203ENSMUST00000113706 Mpp4Q6P7F1 635 aa16.58■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 46.8 ms