RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 AacsQ9D2R0 672 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Dkk3Q9QUN9 349 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Togaram1Q6A070 1776 aaKnown RBP10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Cdr2lA2A6T1 465 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Gm13084A2A8N0 494 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Zcchc7B1AX39 541 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Dnaaf5B9EJR8 853 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Inpp5aE9QAS7 422 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Cyp4a31F8WGU9 509 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Vmn2r77L7N2B7 854 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Gm7995L7N2E4 160 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Art2bO35975 289 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Alx3O70137 343 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Rrm1P07742 792 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Mov10P23249 1004 aaKnown RBP10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Miga1Q4QQM5 600 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ctc1Q5SUQ9 1212 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Six2Q62232 296 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Insm1Q63ZV0 521 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ephb1Q8CBF3 984 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Hid1Q8R1F6 788 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 NamptQ99KQ4 491 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Mxra7Q9CZH7 178 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Satl1Q9D5N8 744 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Cldn22Q9D7U6 220 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Natd1Q9DBW3 110 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Rnf11Q9QYK7 154 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Rad9aQ9Z0F6 389 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Mrc1Q61830 1456 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Als2Q920R0 1651 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Crb1Q8VHS2 1405 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Gm6657A0A1B0GRJ3 277 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Gm7168A0AUV4 508 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Acnat1A2AKK5 416 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Gm3173A6NAS3 172 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Vwa5b1A9Z1V5 1215 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Qtrt2B8ZXI1 415 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Gm3020E9Q3J7 150 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Pabpc4lG5E8X2 370 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Gm2897K7N6T7 172 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Esr2O08537 530 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Pold2O35654 469 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 ZfaP23607 742 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Aco1P28271 889 aaKnown RBP10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Hps5P59438 1126 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ranbp9P69566 653 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Adcy8P97490 1249 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Gm3414Q3TNU4 584 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ddx55Q6ZPL9 600 aaKnown RBP10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Gabbr2Q80T41 940 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ugt2a1Q80X89 528 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Rasgrp4Q8BTM9 673 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ppme1Q8BVQ5 386 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 HlfQ8BW74 295 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Gm3411Q8C7R2 150 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Cdhr5Q8VHF2 831 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Cdhr1Q8VHP6 859 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Rmnd5bQ91YQ7 393 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 St13Q99L47 371 aaKnown RBP10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Abtb1Q99LJ2 478 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Sept12Q9D451 317 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ifrd2Q9D8U0 441 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Smok3cA0A087WSF2 504 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Gm21083A0A0G2JFD5 256 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Tgm7A2ART8 616 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ttc17E9PVB5 1198 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Akr1c19G3X9Y6 323 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Anxa8O35640 327 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Tp63O88898 680 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Prl3b1P09586 222 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Mier3Q3UHF3 551 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Lcn3Q62471 182 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Slc39a10Q6P5F6 833 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Atp2b4Q6Q477 1205 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Akap7Q7TN79 314 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 AftphQ80WT5 931 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Pex26Q8BGI5 305 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Catsper4Q8BVN3 442 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Samd3Q8C4H2 520 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 OgtQ8CGY8 1046 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Clip4Q8CI96 704 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ppp1r14cQ8R4S0 164 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Q9CPS8 106 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Fam122aQ9DB52 284 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Cnga3Q9JJZ8 631 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ccne2Q9Z238 404 aa10.1□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Olfr625-ps1A0A140T8L4 321 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 IsxA1A546 240 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 4931406B18RikA2RSL7 367 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Klhl4B1AZR0 717 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ccdc62E9PVD1 701 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 1700029H14RikE9PY36 240 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Oog1E9Q5G7 496 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Gm11397F6V5V4 377 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Zfp850J3QPC5 689 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Foxm1O08696 760 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Pole2O54956 527 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ptk2P34152 1090 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Kcnn2P58390 839 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Gng2P63213 71 aa10.09□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms