RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 MyrfQ3UR85 1138 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 GmipQ6PGG2 971 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Nap1l4Q78ZA7 375 aaKnown RBP11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Zbtb24Q80X44 710 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Fam118bQ8C569 351 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Gprc5cQ8K3J9 440 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 PhykplQ8R1K4 467 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Dach2Q925Q8 634 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Ddx28Q9CWT6 540 aaKnown RBP11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Mxra7Q9CZH7 178 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Nup50Q9JIH2 466 aaKnown RBP11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 LipaQ9Z0M5 397 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 CN725425A0A087WRU1 652 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Fyb2A2A995 729 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Ttc38A3KMP2 465 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Rfx8D3YU81 596 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Nmt1O70310 496 aaKnown RBP11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Msh3P13705 1091 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 ArP19091 899 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Hoxc11P31313 304 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Ebf1Q07802 591 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 YdjcQ14BV6 310 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Dnajc1Q61712 552 aaKnown RBP11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Gstt1Q64471 240 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Klhl42Q8BFQ9 493 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Slc17a8Q8BFU8 601 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Tmtc4Q8BG19 741 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Ttc16Q8C1F5 767 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Pstpip2Q99M15 334 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Gimap3Q99MI6 301 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Lyrm1Q9CQB7 122 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Pabpc6Q9D4E6 643 aaKnown RBP11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Taf1dQ9D4V4 322 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 TrirQ9D735 173 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Myh11O08638 1972 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Gm2030D3Z7C4 212 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 1600015I10RikE9Q745 711 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Olfr292F8VQ84 308 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Gm10250G3X9L6 160 aaKnown RBP11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Zbtb11G5E8B9 1050 aaKnown RBP11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Tcea1P10711 301 aaKnown RBP11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Pdcd2P46718 343 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 CtshP49935 333 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Myl2P51667 166 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Arl4cP61208 192 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 NfibP97863 570 aaKnown RBP11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Churc1Q6DG52 112 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Krt9Q6RHW0 743 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Rnaseh2bQ80ZV0 308 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Phf20Q8BLG0 1010 aaKnown RBP11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Scyl2Q8CFE4 930 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Kbtbd4Q8R179 534 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Snx10Q9CWT3 201 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Fam187aQ9D3R5 417 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Rab11fip1Q9D620 645 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Atp5hQ9DCX2 161 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Cpb2Q9JHH6 422 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Clec4aQ9QZ15 238 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Clcn2Q9R0A1 908 aa11.98□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Zfp831A2ADM8 1628 aa11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Smchd1Q6P5D8 2007 aaKnown RBP11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Znf804aA2AKY4 1200 aa11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Slc35g2D3YVE8 412 aa11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Zfp780bE9Q2S6 806 aa11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Gm5145F8VQ88 278 aa11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 DmpkP54265 631 aa11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Ptcd3Q14C51 685 aaKnown RBP11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Zfp607aQ3TQG9 686 aa11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Ptk6Q64434 451 aa11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Ssxb10Q6XAR7 170 aa11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Psmd11Q8BG32 422 aa11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Cog5Q8C0L8 829 aa11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Trappc12Q8K2L8 797 aa11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Sh3kbp1Q8R550 709 aaKnown RBP11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Afg3l1Q920A7 789 aaKnown RBP11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Ppp1r3aQ99MR9 1089 aa11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Poc5Q9DBS8 558 aa11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 MesdQ9ERE7 224 aa11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Drg2Q9QXB9 364 aaKnown RBP11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Fam205a1D3YZF6 1314 aa11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Gm6370A0A0G2JGX9 315 aa11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Olfr675A0A1B0GSE1 317 aa11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Olfr67F8VPJ8 320 aa11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Gm6309L7N481 315 aa11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 AdssP46664 456 aa11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Map3k10Q66L42 940 aa11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Scgb2b2Q6UGQ3 114 aa11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Ube2q1Q7TSS2 422 aa11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Supt20hQ7TT00 530 aaKnown RBP11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Uroc1Q8VC12 676 aa11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Catsper1Q91ZR5 686 aa11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Trim7Q923T7 510 aa11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Gid8Q9D7M1 228 aa11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Sucla2Q9Z2I9 463 aa11.97□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Flt1P35969 1333 aa11.96□□□□□ -0.49
Sdc1-201ENSMUST00000020911 SynrgQ5SV85 1306 aa11.96□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Zscan4-ps1A0A1C7CYV3 506 aa11.96□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Sh3pxd2bA2AAY5 908 aa11.96□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Dhtkd1A2ATU0 921 aa11.96□□□□□ -0.49
Sdc1-201ENSMUST00000020911 Zscan4dA7KBS4 506 aa11.96□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms