RNA–Protein interactions for RNA: YPR065W

ROX1, Transcript of Heme-dependent repressor of hypoxic genes, yeastyeast

Gene ROX1, Length 1,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROX1YPR065W YOL118CQ08259 102 aa0.24□□□□□ -2.37
ROX1YPR065W YOL164W-AQ3E7A5 60 aa0.24□□□□□ -2.37
ROX1YPR065W SPP41P38904 1435 aa0.23□□□□□ -2.37
ROX1YPR065W MYO1P08964 1928 aa0.23□□□□□ -2.37
ROX1YPR065W TAO3P40468 2376 aa0.23□□□□□ -2.37
ROX1YPR065W YDR210WQ03482 75 aa0.23□□□□□ -2.37
ROX1YPR065W TOP2P06786 1428 aaKnown RBP0.21□□□□□ -2.38
ROX1YPR065W YER039C-AP0CD97 72 aa0.2□□□□□ -2.38
ROX1YPR065W MPC2P38857 129 aa0.2□□□□□ -2.38
ROX1YPR065W PAU16P35994 123 aa0.19□□□□□ -2.38
ROX1YPR065W PAU15P40585 124 aa0.19□□□□□ -2.38
ROX1YPR065W COX12Q01519 83 aa0.19□□□□□ -2.38
ROX1YPR065W BPT1P14772 1559 aa0.19□□□□□ -2.38
ROX1YPR065W YPL038W-AQ3E7B4 63 aa0.18□□□□□ -2.38
ROX1YPR065W YOS1Q3E834 85 aa0.18□□□□□ -2.38
ROX1YPR065W LYS2P07702 1392 aa0.18□□□□□ -2.38
ROX1YPR065W YOR304C-AO14468 76 aa0.17□□□□□ -2.38
ROX1YPR065W YCR101CP25607 182 aa0.17□□□□□ -2.38
ROX1YPR065W BUD23P25627 275 aaPredicted RBP0.17□□□□□ -2.38
ROX1YPR065W SRB6P32570 121 aa0.17□□□□□ -2.38
ROX1YPR065W RPA12P32529 125 aaKnown RBP0.16□□□□□ -2.38
ROX1YPR065W GNA1P43577 159 aaPredicted RBP0.16□□□□□ -2.38
ROX1YPR065W YNL190WP53872 204 aa0.16□□□□□ -2.38
ROX1YPR065W RIM15P43565 1770 aa0.15□□□□□ -2.39
ROX1YPR065W RPS11AP0CX47 156 aaKnown RBP0.15□□□□□ -2.39
ROX1YPR065W RPS11BP0CX48 156 aaKnown RBP0.15□□□□□ -2.39
ROX1YPR065W SRB8P25648 1427 aa0.14□□□□□ -2.39
ROX1YPR065W SSN2P38931 1420 aa0.14□□□□□ -2.39
ROX1YPR065W YBR292CP38357 123 aa0.14□□□□□ -2.39
ROX1YPR065W MIC10Q96VH5 97 aa0.14□□□□□ -2.39
ROX1YPR065W TY3B-IQ7LHG5 1498 aaKnown RBP0.14□□□□□ -2.39
ROX1YPR065W UBC4P15731 148 aa0.13□□□□□ -2.39
ROX1YPR065W MRX7P53869 86 aa0.13□□□□□ -2.39
ROX1YPR065W YMR090WQ04304 227 aaKnown RBP0.13□□□□□ -2.39
ROX1YPR065W KRE5P22023 1365 aa0.13□□□□□ -2.39
ROX1YPR065W NTE1Q04958 1679 aa0.13□□□□□ -2.39
ROX1YPR065W MDS3P53094 1487 aa0.12□□□□□ -2.39
ROX1YPR065W UBC5P15732 148 aa0.12□□□□□ -2.39
ROX1YPR065W MRP17P28778 131 aa0.12□□□□□ -2.39
ROX1YPR065W MRPL38P35996 138 aaPredicted RBP0.12□□□□□ -2.39
ROX1YPR065W RUB1Q03919 77 aa0.12□□□□□ -2.39
ROX1YPR065W ICY1Q04329 127 aa0.12□□□□□ -2.39
ROX1YPR065W YMR103CQ04436 120 aa0.12□□□□□ -2.39
ROX1YPR065W YCR095W-AQ3E787 52 aa0.12□□□□□ -2.39
ROX1YPR065W TSC11P40061 1430 aa0.12□□□□□ -2.39
ROX1YPR065W MIX14Q04341 121 aa0.11□□□□□ -2.39
ROX1YPR065W YBR090CP38253 122 aa0.1□□□□□ -2.39
ROX1YPR065W ATX1P38636 73 aa0.1□□□□□ -2.39
ROX1YPR065W SNA2P56508 79 aa0.1□□□□□ -2.39
ROX1YPR065W GEA1P47102 1408 aaPredicted RBP0.1□□□□□ -2.39
ROX1YPR065W RPS12P48589 143 aaKnown RBP0.09□□□□□ -2.4
ROX1YPR065W YRF1-2P40105 1681 aa0.08□□□□□ -2.4
ROX1YPR065W LHP1P33399 275 aaKnown RBP0.08□□□□□ -2.4
ROX1YPR065W YNL198CP40166 100 aa0.08□□□□□ -2.4
ROX1YPR065W TY1B-BLQ12490 1755 aa0.08□□□□□ -2.4
ROX1YPR065W ROX3P25046 220 aa0.07□□□□□ -2.4
ROX1YPR065W YHL005CP38752 130 aa0.07□□□□□ -2.4
ROX1YPR065W AIM19P40502 157 aa0.07□□□□□ -2.4
ROX1YPR065W YBR016WP38216 128 aa0.06□□□□□ -2.4
ROX1YPR065W RSM18P40033 138 aa0.06□□□□□ -2.4
ROX1YPR065W PAU20Q08322 120 aa0.06□□□□□ -2.4
ROX1YPR065W YNR034W-AQ3E841 98 aa0.06□□□□□ -2.4
ROX1YPR065W PAU6P0CE90 120 aa0.05□□□□□ -2.4
ROX1YPR065W PAU18P0CE91 120 aa0.05□□□□□ -2.4
ROX1YPR065W PAU5P43575 122 aa0.05□□□□□ -2.4
ROX1YPR065W PDR11P40550 1411 aa0.04□□□□□ -2.4
ROX1YPR065W YER137CP40083 148 aaKnown RBP0.04□□□□□ -2.4
ROX1YPR065W RSM19P53733 91 aaPredicted RBP0.04□□□□□ -2.4
ROX1YPR065W YBL071CP38185 102 aa0.03□□□□□ -2.4
ROX1YPR065W RGI1P40043 161 aaPredicted RBP0.03□□□□□ -2.4
ROX1YPR065W RPC10P40422 70 aa0.03□□□□□ -2.4
ROX1YPR065W KSH1Q8TGJ3 72 aa0.03□□□□□ -2.4
ROX1YPR065W YRF1-1P0CX20 1796 aa0.03□□□□□ -2.4
ROX1YPR065W YRF1-5P0CX21 1796 aa0.03□□□□□ -2.4
ROX1YPR065W YRF1-8P0CX22 1796 aa0.03□□□□□ -2.4
ROX1YPR065W CAT8P39113 1433 aa0.03□□□□□ -2.41
ROX1YPR065W GEA2P39993 1459 aaKnown RBP0.03□□□□□ -2.41
ROX1YPR065W BUD4P47136 1447 aa0.02□□□□□ -2.41
ROX1YPR065W REV3P14284 1504 aa0.02□□□□□ -2.41
ROX1YPR065W YBR056W-AI2HB52 66 aa0.01□□□□□ -2.41
ROX1YPR065W EMC5P40540 141 aa0.01□□□□□ -2.41
ROX1YPR065W YOR289WQ12012 251 aaPredicted RBP0.01□□□□□ -2.41
ROX1YPR065W YFR009W-AP0C5M9 85 aa0□□□□□ -2.41
ROX1YPR065W PAU1P0CE88 120 aa0□□□□□ -2.41
ROX1YPR065W PAU14P0CE89 120 aa0□□□□□ -2.41
ROX1YPR065W PAU8P0CE92 120 aa0□□□□□ -2.41
ROX1YPR065W PAU11P0CE93 120 aa0□□□□□ -2.41
ROX1YPR065W PDX3P38075 228 aaKnown RBP0□□□□□ -2.41
ROX1YPR065W PAU13P38725 120 aa0□□□□□ -2.41
ROX1YPR065W RPL38P49167 78 aaKnown RBP0□□□□□ -2.41
ROX1YPR065W PAU10Q03050 120 aa0□□□□□ -2.41
ROX1YPR065W PAU9Q3E770 120 aa0□□□□□ -2.41
ROX1YPR065W COX7P10174 60 aa-0.02□□□□□ -2.41
ROX1YPR065W HMRA1P0CY11 126 aa-0.03□□□□□ -2.41
ROX1YPR065W SPC1P46965 94 aa-0.03□□□□□ -2.41
ROX1YPR065W PAU4P53427 120 aa-0.03□□□□□ -2.41
ROX1YPR065W NHP10Q03435 203 aa-0.03□□□□□ -2.41
ROX1YPR065W YNL042W-BQ3E7Z2 85 aa-0.03□□□□□ -2.41
ROX1YPR065W MDN1Q12019 4910 aaKnown RBP-0.03□□□□□ -2.41
ROX1YPR065W YJR107C-AP0CT86 78 aa-0.04□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 53.3 ms