RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W WWM1P43582 211 aaKnown RBP1.75□□□□□ -2.13
SEC16YPL085W SHH4Q06236 168 aa1.75□□□□□ -2.13
SEC16YPL085W YLR412C-AQ3E742 68 aa1.75□□□□□ -2.13
SEC16YPL085W YIL060WP40519 144 aa1.75□□□□□ -2.13
SEC16YPL085W HAL1Q01766 294 aa1.75□□□□□ -2.13
SEC16YPL085W YHL042WP38729 150 aa1.75□□□□□ -2.13
SEC16YPL085W MBB1P39534 108 aa1.75□□□□□ -2.13
SEC16YPL085W GAT3Q07928 141 aa1.75□□□□□ -2.13
SEC16YPL085W GSC2P40989 1895 aa1.75□□□□□ -2.13
SEC16YPL085W YER135CP40082 130 aa1.75□□□□□ -2.13
SEC16YPL085W BUD25P85052 153 aa1.75□□□□□ -2.13
SEC16YPL085W CPR1P14832 162 aaKnown RBP1.75□□□□□ -2.13
SEC16YPL085W COX12Q01519 83 aa1.75□□□□□ -2.13
SEC16YPL085W CRC1Q12289 327 aa1.75□□□□□ -2.13
SEC16YPL085W YBR200W-AQ3E755 54 aa1.75□□□□□ -2.13
SEC16YPL085W YLL053CP0CD98 152 aa1.74□□□□□ -2.13
SEC16YPL085W YHR213WP0CI67 198 aa1.74□□□□□ -2.13
SEC16YPL085W YOS1Q3E834 85 aa1.74□□□□□ -2.13
SEC16YPL085W SPT4P32914 102 aaPredicted RBP1.74□□□□□ -2.13
SEC16YPL085W MRPL16P38064 232 aa1.74□□□□□ -2.13
SEC16YPL085W DDR48P18899 430 aaKnown RBP1.74□□□□□ -2.13
SEC16YPL085W YER085CP40058 173 aa1.74□□□□□ -2.13
SEC16YPL085W SPG1P50088 95 aa1.74□□□□□ -2.13
SEC16YPL085W YCL021W-AQ96VH3 125 aa1.74□□□□□ -2.13
SEC16YPL085W MID2P36027 376 aa1.74□□□□□ -2.13
SEC16YPL085W YSY6P38374 65 aa1.74□□□□□ -2.13
SEC16YPL085W POR1P04840 283 aaKnown RBP1.74□□□□□ -2.13
SEC16YPL085W MTC6P38849 526 aa1.74□□□□□ -2.13
SEC16YPL085W PEX22P39718 180 aa1.74□□□□□ -2.13
SEC16YPL085W DYN2Q02647 92 aa1.74□□□□□ -2.13
SEC16YPL085W YJL197C-AP0C5P0 93 aa1.73□□□□□ -2.13
SEC16YPL085W YMR105W-AQ8TGS8 64 aa1.73□□□□□ -2.13
SEC16YPL085W YCL001W-BQ96VH2 84 aa1.73□□□□□ -2.13
SEC16YPL085W YLR236CA0A023PZG4 107 aa1.73□□□□□ -2.13
SEC16YPL085W DCV1P43595 202 aa1.73□□□□□ -2.13
SEC16YPL085W NAT5Q08689 176 aa1.73□□□□□ -2.13
SEC16YPL085W YBL112CQ3E7Y4 105 aa1.73□□□□□ -2.13
SEC16YPL085W RPL16AP26784 199 aaKnown RBP1.73□□□□□ -2.13
SEC16YPL085W YMR244WQ04018 355 aa1.73□□□□□ -2.13
SEC16YPL085W ECM19Q06011 112 aa1.73□□□□□ -2.13
SEC16YPL085W Q0142Q9ZZW4 58 aa1.73□□□□□ -2.13
SEC16YPL085W RPL32P38061 130 aaKnown RBP1.73□□□□□ -2.13
SEC16YPL085W PET8P38921 284 aa1.73□□□□□ -2.13
SEC16YPL085W JID1Q12350 301 aa1.73□□□□□ -2.13
SEC16YPL085W YFL041W-AQ3E817 63 aa1.73□□□□□ -2.13
SEC16YPL085W YMR316C-AI2HB70 103 aa1.73□□□□□ -2.13
SEC16YPL085W UBC5P15732 148 aa1.73□□□□□ -2.13
SEC16YPL085W YCR022CP25620 114 aa1.73□□□□□ -2.13
SEC16YPL085W YJR146WP47174 117 aa1.73□□□□□ -2.13
SEC16YPL085W YJL027CP47063 138 aaPredicted RBP1.72□□□□□ -2.13
SEC16YPL085W LSM6Q06406 86 aaKnown RBP1.72□□□□□ -2.13
SEC16YPL085W EMC6Q12431 108 aa1.72□□□□□ -2.13
SEC16YPL085W YLR302CO13544 120 aa1.72□□□□□ -2.13
SEC16YPL085W PRE1P22141 198 aaKnown RBP1.72□□□□□ -2.13
SEC16YPL085W VMA11P32842 164 aa1.72□□□□□ -2.13
SEC16YPL085W COX14P39103 70 aa1.72□□□□□ -2.13
SEC16YPL085W DGA1Q08650 418 aa1.72□□□□□ -2.13
SEC16YPL085W YCR041WP37265 110 aa1.72□□□□□ -2.13
SEC16YPL085W MIG3P39943 394 aa1.72□□□□□ -2.13
SEC16YPL085W ARC15P40518 154 aaRIP-Chip data1.72□□□□□ -2.13not detected
SEC16YPL085W YCR024C-BQ3E7Z8 88 aa1.72□□□□□ -2.13
SEC16YPL085W YIA6P40556 373 aa1.72□□□□□ -2.13
SEC16YPL085W YGR121W-AQ3E816 71 aa1.72□□□□□ -2.13
SEC16YPL085W YEL067CP39978 195 aa1.72□□□□□ -2.13
SEC16YPL085W WSC2P53832 503 aa1.72□□□□□ -2.13
SEC16YPL085W RPA12P32529 125 aaKnown RBP1.71□□□□□ -2.14
SEC16YPL085W RGM1Q00453 211 aa1.71□□□□□ -2.14
SEC16YPL085W YLR122CQ12312 125 aa1.71□□□□□ -2.14
SEC16YPL085W HUR1P45820 110 aa1.71□□□□□ -2.14
SEC16YPL085W MSA2P36157 363 aa1.71□□□□□ -2.14
SEC16YPL085W YGR151CP53287 111 aa1.71□□□□□ -2.14
SEC16YPL085W GLO1P50107 326 aa1.71□□□□□ -2.14
SEC16YPL085W ICY1Q04329 127 aa1.71□□□□□ -2.14
SEC16YPL085W LCL1Q02786 101 aa1.71□□□□□ -2.14
SEC16YPL085W YMR007WQ03675 126 aa1.71□□□□□ -2.14
SEC16YPL085W YMR103CQ04436 120 aa1.71□□□□□ -2.14
SEC16YPL085W RXT3Q07458 294 aa1.71□□□□□ -2.14
SEC16YPL085W YNL042W-BQ3E7Z2 85 aa1.71□□□□□ -2.14
SEC16YPL085W SCM4P32564 187 aa1.7□□□□□ -2.14
SEC16YPL085W YIR021W-AQ3E739 70 aa1.7□□□□□ -2.14
SEC16YPL085W ECM12O13529 151 aa1.7□□□□□ -2.14
SEC16YPL085W YLR156WP0CE96 114 aa1.7□□□□□ -2.14
SEC16YPL085W YLR159WP0CE97 114 aa1.7□□□□□ -2.14
SEC16YPL085W YLR161WP0CE98 114 aa1.7□□□□□ -2.14
SEC16YPL085W YLR157W-DP0CE99 70 aa1.7□□□□□ -2.14
SEC16YPL085W INO4P13902 151 aa1.7□□□□□ -2.14
SEC16YPL085W YFL015CP43578 164 aa1.7□□□□□ -2.14
SEC16YPL085W SNA4Q07549 140 aa1.7□□□□□ -2.14
SEC16YPL085W CTR2P38865 189 aa1.7□□□□□ -2.14
SEC16YPL085W POP3P53833 195 aaPredicted RBP1.7□□□□□ -2.14
SEC16YPL085W RPL23AP0CX41 137 aaKnown RBP1.7□□□□□ -2.14
SEC16YPL085W RPL23BP0CX42 137 aaKnown RBP1.7□□□□□ -2.14
SEC16YPL085W EDC2P40023 145 aaPredicted RBP1.7□□□□□ -2.14
SEC16YPL085W SLO1Q3E784 85 aa1.7□□□□□ -2.14
SEC16YPL085W FKS1P38631 1876 aaKnown RBP1.7□□□□□ -2.14
SEC16YPL085W SRP14P38985 146 aa1.7□□□□□ -2.14
SEC16YPL085W KRE1P17260 313 aa1.69□□□□□ -2.14
SEC16YPL085W Q0032Q9ZZX7 96 aa1.69□□□□□ -2.14
SEC16YPL085W DIF1O13577 133 aa1.69□□□□□ -2.14
SEC16YPL085W UBC4P15731 148 aa1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 56.7 ms