RNA–Protein interactions for RNA: YMR179W

SPT21, Transcript of Protein with a role in transcriptional silencing, yeast

Gene SPT21, Length 2,277 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT21	YMR179W	YCR101C	P25607	182 aa		0.35	□□□□□ -2.35
SPT21	YMR179W	RGI1	P40043	161 aa	Predicted RBP	0.35	□□□□□ -2.35
SPT21	YMR179W	TSC11	P40061	1430 aa		0.35	□□□□□ -2.35
SPT21	YMR179W	SEC16	P48415	2195 aa	Known RBP	0.35	□□□□□ -2.35
SPT21	YMR179W	SRB6	P32570	121 aa		0.35	□□□□□ -2.35
SPT21	YMR179W	YBR090C	P38253	122 aa		0.35	□□□□□ -2.35
SPT21	YMR179W	IMP2	P46972	177 aa		0.35	□□□□□ -2.35
SPT21	YMR179W	UBC5	P15732	148 aa		0.34	□□□□□ -2.35
SPT21	YMR179W	GCV3	P39726	170 aa	Predicted RBP	0.34	□□□□□ -2.35
SPT21	YMR179W	YMR090W	Q04304	227 aa	Known RBP	0.34	□□□□□ -2.35
SPT21	YMR179W	YHR173C	P38864	112 aa		0.34	□□□□□ -2.36
SPT21	YMR179W	YDR210W	Q03482	75 aa		0.34	□□□□□ -2.36
SPT21	YMR179W	YBR072C-A	Q3E794	53 aa		0.34	□□□□□ -2.36
SPT21	YMR179W	YPL038W-A	Q3E7B4	63 aa		0.34	□□□□□ -2.36
SPT21	YMR179W	BUD4	P47136	1447 aa		0.34	□□□□□ -2.36
SPT21	YMR179W	TOP2	P06786	1428 aa	Known RBP	0.33	□□□□□ -2.36
SPT21	YMR179W	SHU1	P38751	150 aa		0.33	□□□□□ -2.36
SPT21	YMR179W	YIL086C	P40503	102 aa		0.33	□□□□□ -2.36
SPT21	YMR179W	YDR010C	Q12426	110 aa		0.33	□□□□□ -2.36
SPT21	YMR179W	URB1	P34241	1764 aa	Known RBP	0.33	□□□□□ -2.36
SPT21	YMR179W	PRP8	P33334	2413 aa	Known RBP	0.33	□□□□□ -2.36
SPT21	YMR179W	SEC7	P11075	2009 aa	Known RBP	0.33	□□□□□ -2.36
SPT21	YMR179W	KRE5	P22023	1365 aa		0.33	□□□□□ -2.36
SPT21	YMR179W	MPC2	P38857	129 aa		0.33	□□□□□ -2.36
SPT21	YMR179W	PAU5	P43575	122 aa		0.33	□□□□□ -2.36
SPT21	YMR179W	COX19	Q3E731	98 aa		0.33	□□□□□ -2.36
SPT21	YMR179W	YCR095W-A	Q3E787	52 aa		0.33	□□□□□ -2.36
SPT21	YMR179W	COX12	Q01519	83 aa		0.32	□□□□□ -2.36
SPT21	YMR179W	YOL164W-A	Q3E7A5	60 aa		0.32	□□□□□ -2.36
SPT21	YMR179W	YRF1-6	P53819	1859 aa		0.32	□□□□□ -2.36
SPT21	YMR179W	SNF2	P22082	1703 aa		0.31	□□□□□ -2.36
SPT21	YMR179W	MIX14	Q04341	121 aa		0.31	□□□□□ -2.36
SPT21	YMR179W	FYV7	Q12247	151 aa		0.31	□□□□□ -2.36
SPT21	YMR179W	KSH1	Q8TGJ3	72 aa		0.31	□□□□□ -2.36
SPT21	YMR179W	PAU6	P0CE90	120 aa		0.31	□□□□□ -2.36
SPT21	YMR179W	PAU18	P0CE91	120 aa		0.31	□□□□□ -2.36
SPT21	YMR179W	PDX3	P38075	228 aa	Known RBP	0.31	□□□□□ -2.36
SPT21	YMR179W	RSM19	P53733	91 aa	Predicted RBP	0.31	□□□□□ -2.36
SPT21	YMR179W	SNA2	P56508	79 aa		0.31	□□□□□ -2.36
SPT21	YMR179W	BNI1	P41832	1953 aa		0.31	□□□□□ -2.36
SPT21	YMR179W	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.31	□□□□□ -2.36
SPT21	YMR179W	ROX3	P25046	220 aa		0.3	□□□□□ -2.36
SPT21	YMR179W	MRX7	P53869	86 aa		0.3	□□□□□ -2.36
SPT21	YMR179W	YOR289W	Q12012	251 aa	Predicted RBP	0.3	□□□□□ -2.36
SPT21	YMR179W	TY4B-H	P0C2J7	1802 aa		0.3	□□□□□ -2.36
SPT21	YMR179W	SRB8	P25648	1427 aa		0.3	□□□□□ -2.36
SPT21	YMR179W	GEA1	P47102	1408 aa	Predicted RBP	0.3	□□□□□ -2.36
SPT21	YMR179W	BPT1	P14772	1559 aa		0.3	□□□□□ -2.36
SPT21	YMR179W	MRPL38	P35996	138 aa	Predicted RBP	0.3	□□□□□ -2.36
SPT21	YMR179W	RPS29B	P41058	56 aa	Known RBP	0.3	□□□□□ -2.36
SPT21	YMR179W	ICY1	Q04329	127 aa		0.3	□□□□□ -2.36
SPT21	YMR179W	PDR11	P40550	1411 aa		0.3	□□□□□ -2.36
SPT21	YMR179W	BRR2	P32639	2163 aa	Known RBP	0.29	□□□□□ -2.36
SPT21	YMR179W	RPS11A	P0CX47	156 aa	Known RBP	0.29	□□□□□ -2.36
SPT21	YMR179W	RPS11B	P0CX48	156 aa	Known RBP	0.29	□□□□□ -2.36
SPT21	YMR179W	ATX1	P38636	73 aa		0.29	□□□□□ -2.36
SPT21	YMR179W	YHL005C	P38752	130 aa		0.29	□□□□□ -2.36
SPT21	YMR179W	YNR034W-A	Q3E841	98 aa		0.29	□□□□□ -2.36
SPT21	YMR179W	HMRA1	P0CY11	126 aa		0.29	□□□□□ -2.36
SPT21	YMR179W	MRP17	P28778	131 aa		0.29	□□□□□ -2.36
SPT21	YMR179W	YBL071C	P38185	102 aa		0.29	□□□□□ -2.36
SPT21	YMR179W	GEA2	P39993	1459 aa	Known RBP	0.29	□□□□□ -2.36
SPT21	YMR179W	NTE1	Q04958	1679 aa		0.28	□□□□□ -2.36
SPT21	YMR179W	SSN2	P38931	1420 aa		0.28	□□□□□ -2.36
SPT21	YMR179W	PAU20	Q08322	120 aa		0.28	□□□□□ -2.36
SPT21	YMR179W	RPA12	P32529	125 aa	Known RBP	0.27	□□□□□ -2.37
SPT21	YMR179W	EMC5	P40540	141 aa		0.27	□□□□□ -2.37
SPT21	YMR179W	RRT15	Q3E811	62 aa		0.27	□□□□□ -2.37
SPT21	YMR179W	BLM10	P43583	2143 aa		0.27	□□□□□ -2.37
SPT21	YMR179W	PAU1	P0CE88	120 aa		0.27	□□□□□ -2.37
SPT21	YMR179W	PAU14	P0CE89	120 aa		0.27	□□□□□ -2.37
SPT21	YMR179W	PAU8	P0CE92	120 aa		0.27	□□□□□ -2.37
SPT21	YMR179W	PAU11	P0CE93	120 aa		0.27	□□□□□ -2.37
SPT21	YMR179W	YBR292C	P38357	123 aa		0.27	□□□□□ -2.37
SPT21	YMR179W	PAU13	P38725	120 aa		0.27	□□□□□ -2.37
SPT21	YMR179W	AIM19	P40502	157 aa		0.27	□□□□□ -2.37
SPT21	YMR179W	SPC1	P46965	94 aa		0.27	□□□□□ -2.37
SPT21	YMR179W	PAU10	Q03050	120 aa		0.27	□□□□□ -2.37
SPT21	YMR179W	NHP10	Q03435	203 aa		0.27	□□□□□ -2.37
SPT21	YMR179W	PAU9	Q3E770	120 aa		0.27	□□□□□ -2.37
SPT21	YMR179W	REV3	P14284	1504 aa		0.27	□□□□□ -2.37
SPT21	YMR179W	POL2	P21951	2222 aa	Known RBP	0.27	□□□□□ -2.37
SPT21	YMR179W	RSM18	P40033	138 aa		0.26	□□□□□ -2.37
SPT21	YMR179W	ZEO1	Q08245	113 aa		0.26	□□□□□ -2.37
SPT21	YMR179W	CAT8	P39113	1433 aa		0.26	□□□□□ -2.37
SPT21	YMR179W	NHP2	P32495	156 aa	Predicted RBP	0.26	□□□□□ -2.37
SPT21	YMR179W	YNL190W	P53872	204 aa		0.26	□□□□□ -2.37
SPT21	YMR179W	YPL225W	Q08971	146 aa	Known RBP	0.26	□□□□□ -2.37
SPT21	YMR179W	RSF2	P46974	1380 aa		0.25	□□□□□ -2.37
SPT21	YMR179W	RPC10	P40422	70 aa		0.25	□□□□□ -2.37
SPT21	YMR179W	MSL1	P40567	111 aa	Predicted RBP	0.25	□□□□□ -2.37
SPT21	YMR179W	PAU4	P53427	120 aa		0.25	□□□□□ -2.37
SPT21	YMR179W	YKL068W-A	Q3E826	78 aa		0.25	□□□□□ -2.37
SPT21	YMR179W	YPR117W	Q06116	2489 aa		0.25	□□□□□ -2.37
SPT21	YMR179W	FAS2	P19097	1887 aa	Known RBP	0.24	□□□□□ -2.37
SPT21	YMR179W	MYO1	P08964	1928 aa		0.24	□□□□□ -2.37
SPT21	YMR179W	SNU13	P39990	126 aa	Known RBP	0.24	□□□□□ -2.37
SPT21	YMR179W	YNL198C	P40166	100 aa		0.23	□□□□□ -2.37
SPT21	YMR179W	YDR042C	Q03205	200 aa		0.23	□□□□□ -2.37
SPT21	YMR179W	SUS1	Q6WNK7	96 aa		0.23	□□□□□ -2.37

Retrieved 100 of 5,963 RNA–protein pairs in 7.1 ms