RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W PAU15P40585 124 aa0.23□□□□□ -2.37
SMD2YLR275W VMA21P41806 77 aa0.23□□□□□ -2.37
SMD2YLR275W YGR164WP53291 111 aa0.23□□□□□ -2.37
SMD2YLR275W SWC7Q06707 132 aa0.23□□□□□ -2.37
SMD2YLR275W RPO41P13433 1351 aaKnown RBP0.22□□□□□ -2.37
SMD2YLR275W RPA12P32529 125 aaKnown RBP0.22□□□□□ -2.37
SMD2YLR275W PAU16P35994 123 aa0.22□□□□□ -2.37
SMD2YLR275W MPC2P38857 129 aa0.22□□□□□ -2.37
SMD2YLR275W YPL038W-AQ3E7B4 63 aa0.21□□□□□ -2.38
SMD2YLR275W BUD23P25627 275 aaPredicted RBP0.2□□□□□ -2.38
SMD2YLR275W YNL190WP53872 204 aa0.2□□□□□ -2.38
SMD2YLR275W SPP41P38904 1435 aa0.2□□□□□ -2.38
SMD2YLR275W POL2P21951 2222 aaKnown RBP0.18□□□□□ -2.38
SMD2YLR275W TAO3P40468 2376 aa0.18□□□□□ -2.38
SMD2YLR275W YER039C-AP0CD97 72 aa0.18□□□□□ -2.38
SMD2YLR275W YCR101CP25607 182 aa0.18□□□□□ -2.38
SMD2YLR275W SRB6P32570 121 aa0.18□□□□□ -2.38
SMD2YLR275W COX12Q01519 83 aa0.18□□□□□ -2.38
SMD2YLR275W YOR304C-AO14468 76 aa0.16□□□□□ -2.38
SMD2YLR275W RPS11AP0CX47 156 aaKnown RBP0.16□□□□□ -2.38
SMD2YLR275W RPS11BP0CX48 156 aaKnown RBP0.16□□□□□ -2.38
SMD2YLR275W YOS1Q3E834 85 aa0.15□□□□□ -2.39
SMD2YLR275W MIC10Q96VH5 97 aa0.14□□□□□ -2.39
SMD2YLR275W GNA1P43577 159 aaPredicted RBP0.13□□□□□ -2.39
SMD2YLR275W RUB1Q03919 77 aa0.13□□□□□ -2.39
SMD2YLR275W LYS2P07702 1392 aa0.13□□□□□ -2.39
SMD2YLR275W RIM15P43565 1770 aa0.12□□□□□ -2.39
SMD2YLR275W MRX7P53869 86 aa0.12□□□□□ -2.39
SMD2YLR275W SRB8P25648 1427 aa0.12□□□□□ -2.39
SMD2YLR275W MRPL38P35996 138 aaPredicted RBP0.11□□□□□ -2.39
SMD2YLR275W YCR095W-AQ3E787 52 aa0.11□□□□□ -2.39
SMD2YLR275W ICY1Q04329 127 aa0.1□□□□□ -2.39
SMD2YLR275W SSN2P38931 1420 aa0.1□□□□□ -2.39
SMD2YLR275W KRE5P22023 1365 aa0.09□□□□□ -2.39
SMD2YLR275W UBC4P15731 148 aa0.09□□□□□ -2.4
SMD2YLR275W SNA2P56508 79 aa0.09□□□□□ -2.4
SMD2YLR275W YMR103CQ04436 120 aa0.09□□□□□ -2.4
SMD2YLR275W BPT1P14772 1559 aa0.09□□□□□ -2.4
SMD2YLR275W MRP17P28778 131 aa0.08□□□□□ -2.4
SMD2YLR275W YBR292CP38357 123 aa0.08□□□□□ -2.4
SMD2YLR275W ATX1P38636 73 aa0.07□□□□□ -2.4
SMD2YLR275W YNL198CP40166 100 aa0.07□□□□□ -2.4
SMD2YLR275W YRF1-2P40105 1681 aa0.06□□□□□ -2.4
SMD2YLR275W LHP1P33399 275 aaKnown RBP0.06□□□□□ -2.4
SMD2YLR275W YMR090WQ04304 227 aaKnown RBP0.06□□□□□ -2.4
SMD2YLR275W NTE1Q04958 1679 aa0.05□□□□□ -2.4
SMD2YLR275W PAU6P0CE90 120 aa0.05□□□□□ -2.4
SMD2YLR275W PAU18P0CE91 120 aa0.05□□□□□ -2.4
SMD2YLR275W UBC5P15732 148 aa0.05□□□□□ -2.4
SMD2YLR275W PAU5P43575 122 aa0.05□□□□□ -2.4
SMD2YLR275W PAU20Q08322 120 aa0.05□□□□□ -2.4
SMD2YLR275W TY3B-IQ7LHG5 1498 aaKnown RBP0.04□□□□□ -2.4
SMD2YLR275W TY1B-BLQ12490 1755 aa0.04□□□□□ -2.4
SMD2YLR275W RSM18P40033 138 aa0.04□□□□□ -2.4
SMD2YLR275W RPC10P40422 70 aa0.04□□□□□ -2.4
SMD2YLR275W YNR034W-AQ3E841 98 aa0.04□□□□□ -2.4
SMD2YLR275W ROX3P25046 220 aa0.03□□□□□ -2.4
SMD2YLR275W RPS12P48589 143 aaKnown RBP0.03□□□□□ -2.4
SMD2YLR275W MIX14Q04341 121 aa0.03□□□□□ -2.4
SMD2YLR275W TSC11P40061 1430 aa0.02□□□□□ -2.41
SMD2YLR275W YBL071CP38185 102 aa0.01□□□□□ -2.41
SMD2YLR275W YBR016WP38216 128 aa0.01□□□□□ -2.41
SMD2YLR275W YBR090CP38253 122 aa0.01□□□□□ -2.41
SMD2YLR275W AIM19P40502 157 aa0□□□□□ -2.41
SMD2YLR275W YFR009W-AP0C5M9 85 aa-0.01□□□□□ -2.41
SMD2YLR275W RSM19P53733 91 aaPredicted RBP-0.01□□□□□ -2.41
SMD2YLR275W YRF1-1P0CX20 1796 aa-0.01□□□□□ -2.41
SMD2YLR275W YRF1-5P0CX21 1796 aa-0.01□□□□□ -2.41
SMD2YLR275W YRF1-8P0CX22 1796 aa-0.01□□□□□ -2.41
SMD2YLR275W CAT8P39113 1433 aa-0.02□□□□□ -2.41
SMD2YLR275W GEA1P47102 1408 aaPredicted RBP-0.02□□□□□ -2.41
SMD2YLR275W PAU1P0CE88 120 aa-0.02□□□□□ -2.41
SMD2YLR275W PAU14P0CE89 120 aa-0.02□□□□□ -2.41
SMD2YLR275W PAU8P0CE92 120 aa-0.02□□□□□ -2.41
SMD2YLR275W PAU11P0CE93 120 aa-0.02□□□□□ -2.41
SMD2YLR275W PAU13P38725 120 aa-0.02□□□□□ -2.41
SMD2YLR275W YHL005CP38752 130 aa-0.02□□□□□ -2.41
SMD2YLR275W YER137CP40083 148 aaKnown RBP-0.02□□□□□ -2.41
SMD2YLR275W PAU10Q03050 120 aa-0.02□□□□□ -2.41
SMD2YLR275W PAU9Q3E770 120 aa-0.02□□□□□ -2.41
SMD2YLR275W RPL38P49167 78 aaKnown RBP-0.05□□□□□ -2.42
SMD2YLR275W YOR289WQ12012 251 aaPredicted RBP-0.05□□□□□ -2.42
SMD2YLR275W KSH1Q8TGJ3 72 aa-0.05□□□□□ -2.42
SMD2YLR275W PDR11P40550 1411 aa-0.05□□□□□ -2.42
SMD2YLR275W YJR107C-AP0CT86 78 aa-0.06□□□□□ -2.42
SMD2YLR275W EMC5P40540 141 aa-0.06□□□□□ -2.42
SMD2YLR275W MDS3P53094 1487 aa-0.06□□□□□ -2.42
SMD2YLR275W PAU4P53427 120 aa-0.07□□□□□ -2.42
SMD2YLR275W RGI1P40043 161 aaPredicted RBP-0.08□□□□□ -2.42
SMD2YLR275W SPC1P46965 94 aa-0.08□□□□□ -2.42
SMD2YLR275W NHP10Q03435 203 aa-0.08□□□□□ -2.42
SMD2YLR275W BUD4P47136 1447 aa-0.09□□□□□ -2.42
SMD2YLR275W HMRA1P0CY11 126 aa-0.09□□□□□ -2.42
SMD2YLR275W SGF11Q03067 99 aa-0.09□□□□□ -2.42
SMD2YLR275W PDX3P38075 228 aaKnown RBP-0.1□□□□□ -2.43
SMD2YLR275W YNL042W-BQ3E7Z2 85 aa-0.1□□□□□ -2.43
SMD2YLR275W GEA2P39993 1459 aaKnown RBP-0.1□□□□□ -2.43
SMD2YLR275W COX7P10174 60 aa-0.11□□□□□ -2.43
SMD2YLR275W YIL134C-AQ45U18 67 aa-0.11□□□□□ -2.43
SMD2YLR275W REV3P14284 1504 aa-0.12□□□□□ -2.43
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms