RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C YOR304C-AO14468 76 aa0.51□□□□□ -2.33
VAB2YEL005C YLR419WQ06698 1435 aaKnown RBP0.5□□□□□ -2.33
VAB2YEL005C PAU15P40585 124 aa0.5□□□□□ -2.33
VAB2YEL005C COX19Q3E731 98 aa0.5□□□□□ -2.33
VAB2YEL005C CCW14O13547 238 aa0.49□□□□□ -2.33
VAB2YEL005C PAU16P35994 123 aa0.49□□□□□ -2.33
VAB2YEL005C YPL038W-AQ3E7B4 63 aa0.49□□□□□ -2.33
VAB2YEL005C TOP2P06786 1428 aaKnown RBP0.48□□□□□ -2.33
VAB2YEL005C BUD23P25627 275 aaPredicted RBP0.48□□□□□ -2.33
VAB2YEL005C MPC2P38857 129 aa0.47□□□□□ -2.33
VAB2YEL005C COX12Q01519 83 aa0.47□□□□□ -2.33
VAB2YEL005C YLR255CO13574 117 aa0.46□□□□□ -2.34
VAB2YEL005C YER039C-AP0CD97 72 aa0.46□□□□□ -2.34
VAB2YEL005C YCR101CP25607 182 aa0.46□□□□□ -2.34
VAB2YEL005C RUB1Q03919 77 aa0.46□□□□□ -2.34
VAB2YEL005C RPA12P32529 125 aaKnown RBP0.45□□□□□ -2.34
VAB2YEL005C GNA1P43577 159 aaPredicted RBP0.45□□□□□ -2.34
VAB2YEL005C YOS1Q3E834 85 aa0.45□□□□□ -2.34
VAB2YEL005C YDR210WQ03482 75 aa0.43□□□□□ -2.34
VAB2YEL005C LYS2P07702 1392 aa0.43□□□□□ -2.34
VAB2YEL005C MRX7P53869 86 aa0.42□□□□□ -2.34
VAB2YEL005C SNA2P56508 79 aa0.42□□□□□ -2.34
VAB2YEL005C YCR095W-AQ3E787 52 aa0.42□□□□□ -2.34
VAB2YEL005C RPS11AP0CX47 156 aaKnown RBP0.41□□□□□ -2.34
VAB2YEL005C RPS11BP0CX48 156 aaKnown RBP0.41□□□□□ -2.34
VAB2YEL005C MRP17P28778 131 aa0.41□□□□□ -2.34
VAB2YEL005C ATX1P38636 73 aa0.41□□□□□ -2.34
VAB2YEL005C YNL190WP53872 204 aa0.41□□□□□ -2.34
VAB2YEL005C YMR090WQ04304 227 aaKnown RBP0.41□□□□□ -2.34
VAB2YEL005C MIC10Q96VH5 97 aa0.41□□□□□ -2.34
VAB2YEL005C POL2P21951 2222 aaKnown RBP0.41□□□□□ -2.34
VAB2YEL005C SRB8P25648 1427 aa0.4□□□□□ -2.34
VAB2YEL005C TAO3P40468 2376 aa0.4□□□□□ -2.34
VAB2YEL005C LHP1P33399 275 aaKnown RBP0.4□□□□□ -2.35
VAB2YEL005C YBR292CP38357 123 aa0.39□□□□□ -2.35
VAB2YEL005C YMR103CQ04436 120 aa0.39□□□□□ -2.35
VAB2YEL005C KRE5P22023 1365 aa0.39□□□□□ -2.35
VAB2YEL005C RIM15P43565 1770 aa0.38□□□□□ -2.35
VAB2YEL005C RPS12P48589 143 aaKnown RBP0.38□□□□□ -2.35
VAB2YEL005C ICY1Q04329 127 aa0.38□□□□□ -2.35
VAB2YEL005C SSN2P38931 1420 aa0.38□□□□□ -2.35
VAB2YEL005C UBC4P15731 148 aa0.37□□□□□ -2.35
VAB2YEL005C MDS3P53094 1487 aa0.36□□□□□ -2.35
VAB2YEL005C MRPL38P35996 138 aaPredicted RBP0.36□□□□□ -2.35
VAB2YEL005C YER137CP40083 148 aaKnown RBP0.36□□□□□ -2.35
VAB2YEL005C PAU20Q08322 120 aa0.36□□□□□ -2.35
VAB2YEL005C NTE1Q04958 1679 aa0.35□□□□□ -2.35
VAB2YEL005C UBC5P15732 148 aa0.35□□□□□ -2.35
VAB2YEL005C TSC11P40061 1430 aa0.35□□□□□ -2.35
VAB2YEL005C TY3B-IQ7LHG5 1498 aaKnown RBP0.35□□□□□ -2.35
VAB2YEL005C BPT1P14772 1559 aa0.34□□□□□ -2.36
VAB2YEL005C YBR090CP38253 122 aa0.34□□□□□ -2.36
VAB2YEL005C YNL198CP40166 100 aa0.34□□□□□ -2.36
VAB2YEL005C MIX14Q04341 121 aa0.34□□□□□ -2.36
VAB2YEL005C PAU6P0CE90 120 aa0.33□□□□□ -2.36
VAB2YEL005C PAU18P0CE91 120 aa0.33□□□□□ -2.36
VAB2YEL005C ROX3P25046 220 aa0.33□□□□□ -2.36
VAB2YEL005C AIM19P40502 157 aa0.33□□□□□ -2.36
VAB2YEL005C PAU5P43575 122 aa0.33□□□□□ -2.36
VAB2YEL005C GEA1P47102 1408 aaPredicted RBP0.32□□□□□ -2.36
VAB2YEL005C RGI1P40043 161 aaPredicted RBP0.32□□□□□ -2.36
VAB2YEL005C YRF1-2P40105 1681 aa0.31□□□□□ -2.36
VAB2YEL005C PAU1P0CE88 120 aa0.31□□□□□ -2.36
VAB2YEL005C PAU14P0CE89 120 aa0.31□□□□□ -2.36
VAB2YEL005C PAU8P0CE92 120 aa0.31□□□□□ -2.36
VAB2YEL005C PAU11P0CE93 120 aa0.31□□□□□ -2.36
VAB2YEL005C YBL071CP38185 102 aa0.31□□□□□ -2.36
VAB2YEL005C PAU13P38725 120 aa0.31□□□□□ -2.36
VAB2YEL005C RSM18P40033 138 aa0.31□□□□□ -2.36
VAB2YEL005C PAU10Q03050 120 aa0.31□□□□□ -2.36
VAB2YEL005C PAU9Q3E770 120 aa0.31□□□□□ -2.36
VAB2YEL005C YNR034W-AQ3E841 98 aa0.31□□□□□ -2.36
VAB2YEL005C PDR11P40550 1411 aa0.3□□□□□ -2.36
VAB2YEL005C TY1B-BLQ12490 1755 aa0.3□□□□□ -2.36
VAB2YEL005C EMC5P40540 141 aa0.3□□□□□ -2.36
VAB2YEL005C RSM19P53733 91 aaPredicted RBP0.3□□□□□ -2.36
VAB2YEL005C YBR056W-AI2HB52 66 aa0.29□□□□□ -2.36
VAB2YEL005C YHL005CP38752 130 aa0.29□□□□□ -2.36
VAB2YEL005C YRF1-1P0CX20 1796 aa0.29□□□□□ -2.36
VAB2YEL005C YRF1-5P0CX21 1796 aa0.29□□□□□ -2.36
VAB2YEL005C YRF1-8P0CX22 1796 aa0.29□□□□□ -2.36
VAB2YEL005C RPC10P40422 70 aa0.28□□□□□ -2.36
VAB2YEL005C PAU4P53427 120 aa0.27□□□□□ -2.37
VAB2YEL005C GEA2P39993 1459 aaKnown RBP0.27□□□□□ -2.37
VAB2YEL005C PDX3P38075 228 aaKnown RBP0.26□□□□□ -2.37
VAB2YEL005C RPL38P49167 78 aaKnown RBP0.26□□□□□ -2.37
VAB2YEL005C REV3P14284 1504 aa0.26□□□□□ -2.37
VAB2YEL005C YFR009W-AP0C5M9 85 aa0.25□□□□□ -2.37
VAB2YEL005C YOR289WQ12012 251 aaPredicted RBP0.25□□□□□ -2.37
VAB2YEL005C KSH1Q8TGJ3 72 aa0.25□□□□□ -2.37
VAB2YEL005C YJR107C-AP0CT86 78 aa0.24□□□□□ -2.37
VAB2YEL005C HMRA1P0CY11 126 aa0.24□□□□□ -2.37
VAB2YEL005C CAT8P39113 1433 aa0.23□□□□□ -2.37
VAB2YEL005C SPC1P46965 94 aa0.23□□□□□ -2.37
VAB2YEL005C NHP10Q03435 203 aa0.23□□□□□ -2.37
VAB2YEL005C FYV7Q12247 151 aa0.23□□□□□ -2.37
VAB2YEL005C BUD4P47136 1447 aa0.22□□□□□ -2.37
VAB2YEL005C COX7P10174 60 aa0.22□□□□□ -2.37
VAB2YEL005C YBR016WP38216 128 aa0.21□□□□□ -2.38
VAB2YEL005C SNU13P39990 126 aaKnown RBP0.21□□□□□ -2.38
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms