RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 PJA1Q8NG27 643 aa15.98■□□□□ 0.15
PHGDH-231ENST00000641939 FAXDC2Q96IV6 333 aa15.98■□□□□ 0.15
PHGDH-231ENST00000641939 LRRC3BQ96PB8 259 aa15.98■□□□□ 0.15
PHGDH-231ENST00000641939 TTLL2Q9BWV7 592 aa15.98■□□□□ 0.15
PHGDH-231ENST00000641939 SMG9Q9H0W8 520 aaKnown RBP15.98■□□□□ 0.15
PHGDH-231ENST00000641939 TMEM30AQ9NV96 361 aa15.98■□□□□ 0.15
PHGDH-231ENST00000641939 PATJQ8NI35 1801 aa15.98■□□□□ 0.15
PHGDH-231ENST00000641939 USP46P62068 366 aa15.97■□□□□ 0.15
PHGDH-231ENST00000641939 NHLH1Q02575 133 aa15.97■□□□□ 0.15
PHGDH-231ENST00000641939 PAK1Q13153 545 aa15.97■□□□□ 0.15
PHGDH-231ENST00000641939 ORC1Q13415 861 aa15.97■□□□□ 0.15
PHGDH-231ENST00000641939 CBWD6Q4V339 395 aa15.97■□□□□ 0.15
PHGDH-231ENST00000641939 ARHGAP29Q52LW3 1261 aa15.97■□□□□ 0.15
PHGDH-231ENST00000641939 WDR44Q5JSH3 913 aa15.97■□□□□ 0.15
PHGDH-231ENST00000641939 CBWD3Q5JTY5 395 aa15.97■□□□□ 0.15
PHGDH-231ENST00000641939 CBWD5Q5RIA9 395 aa15.97■□□□□ 0.15
PHGDH-231ENST00000641939 CLEC17AQ6ZS10 378 aa15.97■□□□□ 0.15
PHGDH-231ENST00000641939 TPRG1Q6ZUI0 275 aa15.97■□□□□ 0.15
PHGDH-231ENST00000641939 PAQR9Q6ZVX9 377 aa15.97■□□□□ 0.15
PHGDH-231ENST00000641939 CCDC105Q8IYK2 499 aa15.97■□□□□ 0.15
PHGDH-231ENST00000641939 FUKQ8N0W3 1084 aa15.97■□□□□ 0.15
PHGDH-231ENST00000641939 BPIFB1Q8TDL5 484 aa15.97■□□□□ 0.15
PHGDH-231ENST00000641939 USP13Q92995 863 aaPredicted RBP15.97■□□□□ 0.15
PHGDH-231ENST00000641939 SLC35C1Q96A29 364 aa15.97■□□□□ 0.15
PHGDH-231ENST00000641939 SMARCD1Q96GM5 515 aa15.97■□□□□ 0.15
PHGDH-231ENST00000641939 NT5C1AQ9BXI3 368 aa15.97■□□□□ 0.15
PHGDH-231ENST00000641939 KIF9Q9HAQ2 790 aa15.97■□□□□ 0.15
PHGDH-231ENST00000641939 TDP1Q9NUW8 608 aa15.97■□□□□ 0.15
PHGDH-231ENST00000641939 COQ4Q9Y3A0 265 aa15.97■□□□□ 0.15
PHGDH-231ENST00000641939 TRAV19A0A0A6YYK7 116 aa15.96■□□□□ 0.15
PHGDH-231ENST00000641939 ARNTLO00327 626 aa15.96■□□□□ 0.15
PHGDH-231ENST00000641939 CILPO75339 1184 aa15.96■□□□□ 0.15
PHGDH-231ENST00000641939 AP1G2O75843 785 aa15.96■□□□□ 0.15
PHGDH-231ENST00000641939 DCNP07585 359 aaKnown RBP15.96■□□□□ 0.15
PHGDH-231ENST00000641939 CD58P19256 250 aa15.96■□□□□ 0.15
PHGDH-231ENST00000641939 CD72P21854 359 aa15.96■□□□□ 0.15
PHGDH-231ENST00000641939 PPP3CCP48454 512 aa15.96■□□□□ 0.15
PHGDH-231ENST00000641939 STX17P56962 302 aa15.96■□□□□ 0.15
PHGDH-231ENST00000641939 ZNF268Q14587 947 aaPredicted RBP15.96■□□□□ 0.15
PHGDH-231ENST00000641939 UBXN2BQ14CS0 331 aa15.96■□□□□ 0.15
PHGDH-231ENST00000641939 CCDC40Q4G0X9 1142 aa15.96■□□□□ 0.15
PHGDH-231ENST00000641939 ZNF852Q6ZMS4 543 aa15.96■□□□□ 0.15
PHGDH-231ENST00000641939 NUP93Q8N1F7 819 aa15.96■□□□□ 0.15
PHGDH-231ENST00000641939 C12orf29Q8N999 325 aa15.96■□□□□ 0.15
PHGDH-231ENST00000641939 DTWD2Q8NBA8 298 aa15.96■□□□□ 0.15
PHGDH-231ENST00000641939 SLC2A14Q8TDB8 520 aa15.96■□□□□ 0.15
PHGDH-231ENST00000641939 CSGALNACT1Q8TDX6 532 aa15.96■□□□□ 0.15
PHGDH-231ENST00000641939 TWNKQ96RR1 684 aa15.96■□□□□ 0.15
PHGDH-231ENST00000641939 NELL2Q99435 816 aa15.96■□□□□ 0.15
PHGDH-231ENST00000641939 OSBPL6Q9BZF3 934 aa15.96■□□□□ 0.15
PHGDH-231ENST00000641939 DNAI2Q9GZS0 605 aa15.96■□□□□ 0.15
PHGDH-231ENST00000641939 IRF2BPLQ9H1B7 796 aa15.96■□□□□ 0.15
PHGDH-231ENST00000641939 TRPC7Q9HCX4 862 aa15.96■□□□□ 0.15
PHGDH-231ENST00000641939 DMAP1Q9NPF5 467 aaPredicted RBP15.96■□□□□ 0.15
PHGDH-231ENST00000641939 KRT82Q9NSB4 513 aa15.96■□□□□ 0.15
PHGDH-231ENST00000641939 THG1LQ9NWX6 298 aaKnown RBP15.96■□□□□ 0.15
PHGDH-231ENST00000641939 TRPM5Q9NZQ8 1165 aa15.96■□□□□ 0.15
PHGDH-231ENST00000641939 CCL26Q9Y258 94 aa15.96■□□□□ 0.15
PHGDH-231ENST00000641939 MYO16Q9Y6X6 1858 aa15.95■□□□□ 0.14
PHGDH-231ENST00000641939 FAM170BA6NMN3 283 aa15.95■□□□□ 0.14
PHGDH-231ENST00000641939 MAN2B1O00754 1011 aa15.95■□□□□ 0.14
PHGDH-231ENST00000641939 RTN3O95197 1032 aaPredicted RBP15.95■□□□□ 0.14
PHGDH-231ENST00000641939 USP17L7P0C7H9 530 aa15.95■□□□□ 0.14
PHGDH-231ENST00000641939 CCDC130P13994 396 aa15.95■□□□□ 0.14
PHGDH-231ENST00000641939 GLULP15104 373 aa15.95■□□□□ 0.14
PHGDH-231ENST00000641939 MLLT6P55198 1093 aaPredicted RBP15.95■□□□□ 0.14
PHGDH-231ENST00000641939 PLCB2Q00722 1185 aa15.95■□□□□ 0.14
PHGDH-231ENST00000641939 TTC39CQ8N584 583 aa15.95■□□□□ 0.14
PHGDH-231ENST00000641939 TATDN2Q93075 761 aa15.95■□□□□ 0.14
PHGDH-231ENST00000641939 ZFYVE19Q96K21 471 aa15.95■□□□□ 0.14
PHGDH-231ENST00000641939 CYP2S1Q96SQ9 504 aa15.95■□□□□ 0.14
PHGDH-231ENST00000641939 KCNK16Q96T55 309 aa15.95■□□□□ 0.14
PHGDH-231ENST00000641939 CLSTN2Q9H4D0 955 aa15.95■□□□□ 0.14
PHGDH-231ENST00000641939 FAM124BQ9H5Z6 455 aaPredicted RBP15.95■□□□□ 0.14
PHGDH-231ENST00000641939 LTB4R2Q9NPC1 389 aa15.95■□□□□ 0.14
PHGDH-231ENST00000641939 FAM49BQ9NUQ9 324 aa15.95■□□□□ 0.14
PHGDH-231ENST00000641939 DLGAP2Q9P1A6 1054 aa15.95■□□□□ 0.14
PHGDH-231ENST00000641939 MRPS17Q9Y2R5 130 aaKnown RBP15.95■□□□□ 0.14
PHGDH-231ENST00000641939 MTF2Q9Y483 593 aaPredicted RBP15.95■□□□□ 0.14
PHGDH-231ENST00000641939 PIAS3Q9Y6X2 628 aa15.95■□□□□ 0.14
PHGDH-231ENST00000641939 C2orf78A6NCI8 922 aa15.94■□□□□ 0.14
PHGDH-231ENST00000641939 SHISA7A6NL88 538 aa15.94■□□□□ 0.14
PHGDH-231ENST00000641939 GNA14O95837 355 aa15.94■□□□□ 0.14
PHGDH-231ENST00000641939 CKMP06732 381 aa15.94■□□□□ 0.14
PHGDH-231ENST00000641939 PFKLP17858 780 aa15.94■□□□□ 0.14
PHGDH-231ENST00000641939 YWHAQP27348 245 aa15.94■□□□□ 0.14
PHGDH-231ENST00000641939 FMO5P49326 533 aa15.94■□□□□ 0.14
PHGDH-231ENST00000641939 PDE6CP51160 858 aa15.94■□□□□ 0.14
PHGDH-231ENST00000641939 TAF10Q12962 218 aa15.94■□□□□ 0.14
PHGDH-231ENST00000641939 WHAMMQ8TF30 809 aa15.94■□□□□ 0.14
PHGDH-231ENST00000641939 CYFIP2Q96F07 1278 aa15.94■□□□□ 0.14
PHGDH-231ENST00000641939 SLITRK1Q96PX8 696 aa15.94■□□□□ 0.14
PHGDH-231ENST00000641939 SLC22A12Q96S37 553 aa15.94■□□□□ 0.14
PHGDH-231ENST00000641939 SMOQ99835 787 aa15.94■□□□□ 0.14
PHGDH-231ENST00000641939 CISHQ9NSE2 258 aa15.94■□□□□ 0.14
PHGDH-231ENST00000641939 GCNT4Q9P109 453 aa15.94■□□□□ 0.14
PHGDH-231ENST00000641939 ZNF840PA6NDX5 716 aa15.93■□□□□ 0.14
PHGDH-231ENST00000641939 H0Y858 1186 aa15.93■□□□□ 0.14
PHGDH-231ENST00000641939 TNFRSF10BO14763 440 aa15.93■□□□□ 0.14
PHGDH-231ENST00000641939 PMM2O15305 246 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms