RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, human

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-231	ENST00000640499	SMARCD2	Q92925	531 aa		28.31	■■■□□ 2.12
VEGFA-231	ENST00000640499	ASIC4	Q96FT7	647 aa		28.31	■■■□□ 2.12
VEGFA-231	ENST00000640499	NDST4	Q9H3R1	872 aa		28.31	■■■□□ 2.12
VEGFA-231	ENST00000640499	TRPV4	Q9HBA0	871 aa		28.31	■■■□□ 2.12
VEGFA-231	ENST00000640499	IL37	Q9NZH6	218 aa		28.31	■■■□□ 2.12
VEGFA-231	ENST00000640499	DUSP12	Q9UNI6	340 aa		28.31	■■■□□ 2.12
VEGFA-231	ENST00000640499	GTPBP10	A4D1E9	387 aa	Known RBP	28.3	■■■□□ 2.12
VEGFA-231	ENST00000640499	HHLA1	C9JL84	531 aa		28.3	■■■□□ 2.12
VEGFA-231	ENST00000640499	ECI2	O75521	394 aa		28.3	■■■□□ 2.12
VEGFA-231	ENST00000640499	PON1	P27169	355 aa		28.3	■■■□□ 2.12
VEGFA-231	ENST00000640499	GCNT1	Q02742	428 aa		28.3	■■■□□ 2.12
VEGFA-231	ENST00000640499	TRIM67	Q6ZTA4	783 aa		28.3	■■■□□ 2.12
VEGFA-231	ENST00000640499	CLEC20A	Q6ZU45	233 aa		28.3	■■■□□ 2.12
VEGFA-231	ENST00000640499	SCAMP5	Q8TAC9	235 aa		28.3	■■■□□ 2.12
VEGFA-231	ENST00000640499	LRRC3B	Q96PB8	259 aa		28.3	■■■□□ 2.12
VEGFA-231	ENST00000640499	ZSWIM1	Q9BR11	485 aa		28.3	■■■□□ 2.12
VEGFA-231	ENST00000640499	GPR88	Q9GZN0	384 aa		28.3	■■■□□ 2.12
VEGFA-231	ENST00000640499	TASP1	Q9H6P5	420 aa		28.3	■■■□□ 2.12
VEGFA-231	ENST00000640499	SIX2	Q9NPC8	291 aa		28.3	■■■□□ 2.12
VEGFA-231	ENST00000640499	DMAP1	Q9NPF5	467 aa	Predicted RBP	28.3	■■■□□ 2.12
VEGFA-231	ENST00000640499	ATP8B3	O60423	1300 aa		28.29	■■■□□ 2.12
VEGFA-231	ENST00000640499	EEF1G	P26641	437 aa	Known RBP	28.29	■■■□□ 2.12
VEGFA-231	ENST00000640499	MAP3K7CL	P57077	242 aa		28.29	■■■□□ 2.12
VEGFA-231	ENST00000640499	KCNMA1	Q12791	1236 aa		28.29	■■■□□ 2.12
VEGFA-231	ENST00000640499	ANO6	Q4KMQ2	910 aa		28.29	■■■□□ 2.12
VEGFA-231	ENST00000640499	ARHGAP17	Q68EM7	881 aa		28.29	■■■□□ 2.12
VEGFA-231	ENST00000640499	TXNDC8	Q6A555	127 aa		28.29	■■■□□ 2.12
VEGFA-231	ENST00000640499	GBP6	Q6ZN66	633 aa		28.29	■■■□□ 2.12
VEGFA-231	ENST00000640499	UBALD2	Q8IYN6	164 aa		28.29	■■■□□ 2.12
VEGFA-231	ENST00000640499	NUP93	Q8N1F7	819 aa		28.29	■■■□□ 2.12
VEGFA-231	ENST00000640499	ELSPBP1	Q96BH3	223 aa		28.29	■■■□□ 2.12
VEGFA-231	ENST00000640499	AJAP1	Q9UKB5	411 aa	Predicted RBP	28.29	■■■□□ 2.12
VEGFA-231	ENST00000640499	CNTN6	Q9UQ52	1028 aa		28.29	■■■□□ 2.12
VEGFA-231	ENST00000640499	MYH10	P35580	1976 aa		28.29	■■■□□ 2.12
VEGFA-231	ENST00000640499	PATJ	Q8NI35	1801 aa		28.28	■■■□□ 2.12
VEGFA-231	ENST00000640499	CALCA	P01258	141 aa		28.28	■■■□□ 2.12
VEGFA-231	ENST00000640499	PRKCSH	P14314	528 aa	Predicted RBP	28.28	■■■□□ 2.12
VEGFA-231	ENST00000640499	WEE1	P30291	646 aa		28.28	■■■□□ 2.12
VEGFA-231	ENST00000640499	MYL5	Q02045	173 aa		28.28	■■■□□ 2.12
VEGFA-231	ENST00000640499	SIGLEC14	Q08ET2	396 aa		28.28	■■■□□ 2.12
VEGFA-231	ENST00000640499	TMEM270	Q6UE05	265 aa		28.28	■■■□□ 2.12
VEGFA-231	ENST00000640499	GPRIN1	Q7Z2K8	1008 aa		28.28	■■■□□ 2.12
VEGFA-231	ENST00000640499	ARID3B	Q8IVW6	561 aa	Predicted RBP	28.28	■■■□□ 2.12
VEGFA-231	ENST00000640499	TFAP2B	Q92481	460 aa		28.28	■■■□□ 2.12
VEGFA-231	ENST00000640499	SLITRK6	Q9H5Y7	841 aa		28.28	■■■□□ 2.12
VEGFA-231	ENST00000640499	ZFP14	Q9HCL3	533 aa		28.28	■■■□□ 2.12
VEGFA-231	ENST00000640499	UBE2T	Q9NPD8	197 aa	Predicted RBP	28.28	■■■□□ 2.12
VEGFA-231	ENST00000640499	TAB2	Q9NYJ8	693 aa		28.28	■■■□□ 2.12
VEGFA-231	ENST00000640499	UXT	Q9UBK9	157 aa	Predicted RBP	28.28	■■■□□ 2.12
VEGFA-231	ENST00000640499	NUP210	Q8TEM1	1887 aa	Predicted RBP	28.27	■■■□□ 2.12
VEGFA-231	ENST00000640499	PRAMEF12	O95522	483 aa		28.27	■■■□□ 2.12
VEGFA-231	ENST00000640499	FAM200B	P0CF97	657 aa		28.27	■■■□□ 2.12
VEGFA-231	ENST00000640499	ZNF18	P17022	549 aa		28.27	■■■□□ 2.12
VEGFA-231	ENST00000640499	ZNF132	P52740	706 aa		28.27	■■■□□ 2.12
VEGFA-231	ENST00000640499	GPC5	P78333	572 aa		28.27	■■■□□ 2.12
VEGFA-231	ENST00000640499	KRT31	Q15323	416 aa		28.27	■■■□□ 2.12
VEGFA-231	ENST00000640499	EXOC3L4	Q17RC7	722 aa		28.27	■■■□□ 2.12
VEGFA-231	ENST00000640499	IER5L	Q5T953	404 aa		28.27	■■■□□ 2.12
VEGFA-231	ENST00000640499	VIT	Q6UXI7	678 aa		28.27	■■■□□ 2.12
VEGFA-231	ENST00000640499	MON1A	Q86VX9	555 aa		28.27	■■■□□ 2.12
VEGFA-231	ENST00000640499	SLC22A12	Q96S37	553 aa		28.27	■■■□□ 2.12
VEGFA-231	ENST00000640499	DUSP16	Q9BY84	665 aa		28.27	■■■□□ 2.12
VEGFA-231	ENST00000640499	SMG9	Q9H0W8	520 aa	Known RBP	28.27	■■■□□ 2.12
VEGFA-231	ENST00000640499	PCDHB4	Q9Y5E5	795 aa		28.27	■■■□□ 2.12
VEGFA-231	ENST00000640499	SYCE3	A1L190	88 aa		28.26	■■■□□ 2.11
VEGFA-231	ENST00000640499	GPR37L1	O60883	481 aa		28.26	■■■□□ 2.11
VEGFA-231	ENST00000640499	SRF	P11831	508 aa		28.26	■■■□□ 2.11
VEGFA-231	ENST00000640499	PGF	P49763	221 aa		28.26	■■■□□ 2.11
VEGFA-231	ENST00000640499	SLC5A3	P53794	718 aa		28.26	■■■□□ 2.11
VEGFA-231	ENST00000640499	YWHAE	P62258	255 aa	Known RBP	28.26	■■■□□ 2.11
VEGFA-231	ENST00000640499	TAF10	Q12962	218 aa		28.26	■■■□□ 2.11
VEGFA-231	ENST00000640499	ARHGAP15	Q53QZ3	475 aa		28.26	■■■□□ 2.11
VEGFA-231	ENST00000640499	TTC30A	Q86WT1	665 aa		28.26	■■■□□ 2.11
VEGFA-231	ENST00000640499	MAB21L3	Q8N8X9	362 aa		28.26	■■■□□ 2.11
VEGFA-231	ENST00000640499	FAM92A	A1XBS5	289 aa		28.25	■■■□□ 2.11
VEGFA-231	ENST00000640499	C2orf78	A6NCI8	922 aa		28.25	■■■□□ 2.11
VEGFA-231	ENST00000640499	ZNF840P	A6NDX5	716 aa		28.25	■■■□□ 2.11
VEGFA-231	ENST00000640499	DHX40	Q8IX18	779 aa	Known RBP	28.25	■■■□□ 2.11
VEGFA-231	ENST00000640499	AOPEP	Q8N6M6	819 aa		28.25	■■■□□ 2.11
VEGFA-231	ENST00000640499	GCNA	Q96QF7	691 aa		28.25	■■■□□ 2.11
VEGFA-231	ENST00000640499	CYP2S1	Q96SQ9	504 aa		28.25	■■■□□ 2.11
VEGFA-231	ENST00000640499	BPIFA3	Q9BQP9	254 aa		28.25	■■■□□ 2.11
VEGFA-231	ENST00000640499	SLC2A4RG	Q9NR83	387 aa		28.25	■■■□□ 2.11
VEGFA-231	ENST00000640499	TMEM221	A6NGB7	291 aa		28.24	■■■□□ 2.11
VEGFA-231	ENST00000640499	HEPACAM2	A8MVW5	462 aa		28.24	■■■□□ 2.11
VEGFA-231	ENST00000640499		M0R296	226 aa		28.24	■■■□□ 2.11
VEGFA-231	ENST00000640499	PAEP	P09466	180 aa		28.24	■■■□□ 2.11
VEGFA-231	ENST00000640499	VDR	P11473	427 aa		28.24	■■■□□ 2.11
VEGFA-231	ENST00000640499	NPR3	P17342	541 aa		28.24	■■■□□ 2.11
VEGFA-231	ENST00000640499	PTMS	P20962	102 aa		28.24	■■■□□ 2.11
VEGFA-231	ENST00000640499	YWHAQ	P27348	245 aa		28.24	■■■□□ 2.11
VEGFA-231	ENST00000640499	IFRD2	Q12894	506 aa	Predicted RBP	28.24	■■■□□ 2.11
VEGFA-231	ENST00000640499	APTX	Q7Z2E3	356 aa	Known RBP	28.24	■■■□□ 2.11
VEGFA-231	ENST00000640499	CMTM8	Q8IZV2	173 aa		28.24	■■■□□ 2.11
VEGFA-231	ENST00000640499	RBBP8NL	Q8NC74	664 aa	Predicted RBP	28.24	■■■□□ 2.11
VEGFA-231	ENST00000640499	RIN3	Q8TB24	985 aa		28.24	■■■□□ 2.11
VEGFA-231	ENST00000640499	MRPS31	Q92665	395 aa	Known RBP	28.24	■■■□□ 2.11
VEGFA-231	ENST00000640499	JAKMIP2	Q96AA8	810 aa		28.24	■■■□□ 2.11
VEGFA-231	ENST00000640499	VPS16	Q9H269	839 aa		28.24	■■■□□ 2.11
VEGFA-231	ENST00000640499	APEX2	Q9UBZ4	518 aa		28.24	■■■□□ 2.11

Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms