RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 SNX9Q9Y5X1 595 aa15.87■□□□□ 0.13
TRIM3-215ENST00000639856 TTC4O95801 387 aa15.86■□□□□ 0.13
TRIM3-215ENST00000639856 CST5P28325 142 aaPredicted RBP15.86■□□□□ 0.13
TRIM3-215ENST00000639856 MMP13P45452 471 aa15.86■□□□□ 0.13
TRIM3-215ENST00000639856 VEGFBP49765 207 aa15.86■□□□□ 0.13
TRIM3-215ENST00000639856 GSCP56915 257 aaPredicted RBP15.86■□□□□ 0.13
TRIM3-215ENST00000639856 PPARDQ03181 441 aa15.86■□□□□ 0.13
TRIM3-215ENST00000639856 INCA1Q0VD86 236 aa15.86■□□□□ 0.13
TRIM3-215ENST00000639856 MYO1EQ12965 1108 aa15.86■□□□□ 0.13
TRIM3-215ENST00000639856 C9orf57Q5W0N0 161 aa15.86■□□□□ 0.13
TRIM3-215ENST00000639856 MFSD5Q6N075 450 aa15.86■□□□□ 0.13
TRIM3-215ENST00000639856 DPH6Q7L8W6 267 aa15.86■□□□□ 0.13
TRIM3-215ENST00000639856 GSTA5Q7RTV2 222 aa15.86■□□□□ 0.13
TRIM3-215ENST00000639856 POLNQ7Z5Q5 900 aa15.86■□□□□ 0.13
TRIM3-215ENST00000639856 RSPH3Q86UC2 560 aa15.86■□□□□ 0.13
TRIM3-215ENST00000639856 RAET1EQ8TD07 263 aa15.86■□□□□ 0.13
TRIM3-215ENST00000639856 FNIP1Q8TF40 1166 aa15.86■□□□□ 0.13
TRIM3-215ENST00000639856 RAPGEF5Q92565 580 aa15.86■□□□□ 0.13
TRIM3-215ENST00000639856 CENPTQ96BT3 561 aa15.86■□□□□ 0.13
TRIM3-215ENST00000639856 WDR35Q9P2L0 1181 aa15.86■□□□□ 0.13
TRIM3-215ENST00000639856 DDX20Q9UHI6 824 aaKnown RBP15.86■□□□□ 0.13
TRIM3-215ENST00000639856 DNPEPQ9ULA0 475 aa15.86■□□□□ 0.13
TRIM3-215ENST00000639856 FAM169AQ9Y6X4 670 aa15.86■□□□□ 0.13
TRIM3-215ENST00000639856 hCG_1818297A0A087WSY0 165 aa15.86■□□□□ 0.13
TRIM3-215ENST00000639856 GOLGA8SH3BPF8 625 aa15.86■□□□□ 0.13
TRIM3-215ENST00000639856 ACSL3O95573 720 aa15.86■□□□□ 0.13
TRIM3-215ENST00000639856 THPOP40225 353 aa15.86■□□□□ 0.13
TRIM3-215ENST00000639856 SLCO1A2P46721 670 aa15.86■□□□□ 0.13
TRIM3-215ENST00000639856 IFI35P80217 286 aaPredicted RBP15.86■□□□□ 0.13
TRIM3-215ENST00000639856 MGAT3Q09327 533 aa15.86■□□□□ 0.13
TRIM3-215ENST00000639856 AUHQ13825 339 aaKnown RBP15.86■□□□□ 0.13
TRIM3-215ENST00000639856 SPATS2Q86XZ4 545 aaKnown RBP15.86■□□□□ 0.13
TRIM3-215ENST00000639856 CCHCR1Q8TD31 782 aa15.86■□□□□ 0.13
TRIM3-215ENST00000639856 ZFP42Q96MM3 310 aa15.86■□□□□ 0.13
TRIM3-215ENST00000639856 CPXM1Q96SM3 734 aa15.86■□□□□ 0.13
TRIM3-215ENST00000639856 MRPL45Q9BRJ2 306 aaKnown RBP15.86■□□□□ 0.13
TRIM3-215ENST00000639856 AGO3Q9H9G7 860 aaKnown RBP15.86■□□□□ 0.13
TRIM3-215ENST00000639856 TRMT13Q9NUP7 481 aaKnown RBP15.86■□□□□ 0.13
TRIM3-215ENST00000639856 BARX2Q9UMQ3 279 aaPredicted RBP15.86■□□□□ 0.13
TRIM3-215ENST00000639856 UBQLN1Q9UMX0 589 aaKnown RBP15.86■□□□□ 0.13
TRIM3-215ENST00000639856 NME7Q9Y5B8 376 aa15.86■□□□□ 0.13
TRIM3-215ENST00000639856 ANKRD65E5RJM6 399 aa15.85■□□□□ 0.13
TRIM3-215ENST00000639856 TRIM66O15016 1216 aa15.85■□□□□ 0.13
TRIM3-215ENST00000639856 PSMA2P25787 234 aa15.85■□□□□ 0.13
TRIM3-215ENST00000639856 CDKN2BP42772 138 aa15.85■□□□□ 0.13
TRIM3-215ENST00000639856 PSMC1P62191 440 aaKnown RBP15.85■□□□□ 0.13
TRIM3-215ENST00000639856 XKR4Q5GH76 650 aa15.85■□□□□ 0.13
TRIM3-215ENST00000639856 IZUMO3Q5VZ72 239 aa15.85■□□□□ 0.13
TRIM3-215ENST00000639856 JOSD2Q8TAC2 188 aa15.85■□□□□ 0.13
TRIM3-215ENST00000639856 MDM1Q8TC05 714 aa15.85■□□□□ 0.13
TRIM3-215ENST00000639856 HEXIM2Q96MH2 286 aaKnown RBP15.85■□□□□ 0.13
TRIM3-215ENST00000639856 ADAM7Q9H2U9 754 aa15.85■□□□□ 0.13
TRIM3-215ENST00000639856 LRRD1A4D1F6 860 aa15.85■□□□□ 0.13
TRIM3-215ENST00000639856 MICAL2O94851 1124 aa15.85■□□□□ 0.13
TRIM3-215ENST00000639856 HOXD10P28358 340 aa15.85■□□□□ 0.13
TRIM3-215ENST00000639856 ZNF268Q14587 947 aaPredicted RBP15.85■□□□□ 0.13
TRIM3-215ENST00000639856 ERMARDQ5T6L9 678 aa15.85■□□□□ 0.13
TRIM3-215ENST00000639856 HIBCHQ6NVY1 386 aaPredicted RBP15.85■□□□□ 0.13
TRIM3-215ENST00000639856 XYLT1Q86Y38 959 aa15.85■□□□□ 0.13
TRIM3-215ENST00000639856 RELL1Q8IUW5 271 aa15.85■□□□□ 0.13
TRIM3-215ENST00000639856 C10orf67Q8IYJ2 551 aa15.85■□□□□ 0.13
TRIM3-215ENST00000639856 SERPINB12Q96P63 405 aa15.85■□□□□ 0.13
TRIM3-215ENST00000639856 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.85■□□□□ 0.13
TRIM3-215ENST00000639856 ZNF148Q9UQR1 794 aa15.85■□□□□ 0.13
TRIM3-215ENST00000639856 DRG1Q9Y295 367 aaKnown RBP15.85■□□□□ 0.13
TRIM3-215ENST00000639856 SPTLC1O15269 473 aa15.84■□□□□ 0.13
TRIM3-215ENST00000639856 HCRTO43612 131 aa15.84■□□□□ 0.13
TRIM3-215ENST00000639856 LRCH4O75427 683 aa15.84■□□□□ 0.13
TRIM3-215ENST00000639856 ERBB2P04626 1255 aa15.84■□□□□ 0.13
TRIM3-215ENST00000639856 KCNE1P15382 129 aa15.84■□□□□ 0.13
TRIM3-215ENST00000639856 CYP3A5P20815 502 aa15.84■□□□□ 0.13
TRIM3-215ENST00000639856 SLC25A11Q02978 314 aaKnown RBP15.84■□□□□ 0.13
TRIM3-215ENST00000639856 ITGA7Q13683 1181 aa15.84■□□□□ 0.13
TRIM3-215ENST00000639856 KYNUQ16719 465 aa15.84■□□□□ 0.13
TRIM3-215ENST00000639856 P3H1Q32P28 736 aa15.84■□□□□ 0.13
TRIM3-215ENST00000639856 ARFGAP1Q8N6T3 406 aa15.84■□□□□ 0.13
TRIM3-215ENST00000639856 LRRC52Q8N7C0 313 aa15.84■□□□□ 0.13
TRIM3-215ENST00000639856 C12orf29Q8N999 325 aa15.84■□□□□ 0.13
TRIM3-215ENST00000639856 PCSK9Q8NBP7 692 aaKnown RBP15.84■□□□□ 0.13
TRIM3-215ENST00000639856 ACSF2Q96CM8 615 aaPredicted RBP15.84■□□□□ 0.13
TRIM3-215ENST00000639856 FOXP3Q9BZS1 431 aa15.84■□□□□ 0.13
TRIM3-215ENST00000639856 SYNCQ9H7C4 482 aa15.84■□□□□ 0.13
TRIM3-215ENST00000639856 DNAJC17Q9NVM6 304 aaKnown RBP15.84■□□□□ 0.13
TRIM3-215ENST00000639856 EFR3BQ9Y2G0 817 aa15.84■□□□□ 0.13
TRIM3-215ENST00000639856 ATXN2Q99700 1313 aaKnown RBP15.84■□□□□ 0.13
TRIM3-215ENST00000639856 M0QYV0 167 aa15.83■□□□□ 0.13
TRIM3-215ENST00000639856 PIRO00625 290 aa15.83■□□□□ 0.13
TRIM3-215ENST00000639856 PTGESO14684 152 aa15.83■□□□□ 0.13
TRIM3-215ENST00000639856 KRT7P08729 469 aa15.83■□□□□ 0.13
TRIM3-215ENST00000639856 VDRP11473 427 aa15.83■□□□□ 0.13
TRIM3-215ENST00000639856 CHN1P15882 459 aa15.83■□□□□ 0.13
TRIM3-215ENST00000639856 GABRB2P47870 512 aa15.83■□□□□ 0.13
TRIM3-215ENST00000639856 AFF1P51825 1210 aaKnown RBP15.83■□□□□ 0.13
TRIM3-215ENST00000639856 ACLYP53396 1101 aa15.83■□□□□ 0.13
TRIM3-215ENST00000639856 OASLQ15646 514 aaKnown RBP15.83■□□□□ 0.13
TRIM3-215ENST00000639856 CNGA2Q16280 664 aa15.83■□□□□ 0.13
TRIM3-215ENST00000639856 LONRF1Q17RB8 773 aa15.83■□□□□ 0.13
TRIM3-215ENST00000639856 TAOK1Q7L7X3 1001 aa15.83■□□□□ 0.13
TRIM3-215ENST00000639856 PRUNE1Q86TP1 453 aa15.83■□□□□ 0.13
TRIM3-215ENST00000639856 ALLCQ8N6M5 410 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms