RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 CETN1Q12798 172 aa23.1■■□□□ 1.29
SCN1B-206ENST00000638536 IFRD2Q12894 506 aaPredicted RBP23.1■■□□□ 1.29
SCN1B-206ENST00000638536 KCNJ12Q14500 433 aa23.1■■□□□ 1.29
SCN1B-206ENST00000638536 UBALD2Q8IYN6 164 aa23.1■■□□□ 1.29
SCN1B-206ENST00000638536 MAB21L3Q8N8X9 362 aa23.1■■□□□ 1.29
SCN1B-206ENST00000638536 TUBGCP2Q9BSJ2 902 aa23.1■■□□□ 1.29
SCN1B-206ENST00000638536 CSNK1G1Q9HCP0 422 aa23.1■■□□□ 1.29
SCN1B-206ENST00000638536 F5P12259 2224 aa23.09■■□□□ 1.29
SCN1B-206ENST00000638536 GPR37L1O60883 481 aa23.09■■□□□ 1.29
SCN1B-206ENST00000638536 ECI2O75521 394 aa23.09■■□□□ 1.29
SCN1B-206ENST00000638536 PRAMEF12O95522 483 aa23.09■■□□□ 1.29
SCN1B-206ENST00000638536 FGF19O95750 216 aa23.09■■□□□ 1.29
SCN1B-206ENST00000638536 CFHP08603 1231 aa23.09■■□□□ 1.29
SCN1B-206ENST00000638536 MAN2A1Q16706 1144 aa23.09■■□□□ 1.29
SCN1B-206ENST00000638536 VITQ6UXI7 678 aa23.09■■□□□ 1.29
SCN1B-206ENST00000638536 CLEC20AQ6ZU45 233 aa23.09■■□□□ 1.29
SCN1B-206ENST00000638536 SLC22A12Q96S37 553 aa23.09■■□□□ 1.29
SCN1B-206ENST00000638536 TTLL2Q9BWV7 592 aa23.09■■□□□ 1.29
SCN1B-206ENST00000638536 TASP1Q9H6P5 420 aa23.09■■□□□ 1.29
SCN1B-206ENST00000638536 ZFP14Q9HCL3 533 aa23.09■■□□□ 1.29
SCN1B-206ENST00000638536 DMAP1Q9NPF5 467 aaPredicted RBP23.09■■□□□ 1.29
SCN1B-206ENST00000638536 FANCLQ9NW38 375 aa23.09■■□□□ 1.29
SCN1B-206ENST00000638536 TMEM221A6NGB7 291 aa23.08■■□□□ 1.29
SCN1B-206ENST00000638536 M0R296 226 aa23.08■■□□□ 1.29
SCN1B-206ENST00000638536 TBXAS1P24557 533 aaPredicted RBP23.08■■□□□ 1.29
SCN1B-206ENST00000638536 GRM2Q14416 872 aa23.08■■□□□ 1.29
SCN1B-206ENST00000638536 KLHL40Q2TBA0 621 aa23.08■■□□□ 1.29
SCN1B-206ENST00000638536 TCP11X2Q5H9J9 407 aa23.08■■□□□ 1.29
SCN1B-206ENST00000638536 CDKAL1Q5VV42 579 aa23.08■■□□□ 1.29
SCN1B-206ENST00000638536 TRIM65Q6PJ69 517 aa23.08■■□□□ 1.29
SCN1B-206ENST00000638536 HFE2Q6ZVN8 426 aa23.08■■□□□ 1.29
SCN1B-206ENST00000638536 GPRIN1Q7Z2K8 1008 aa23.08■■□□□ 1.29
SCN1B-206ENST00000638536 FAM114A1Q8IWE2 563 aa23.08■■□□□ 1.29
SCN1B-206ENST00000638536 ELSPBP1Q96BH3 223 aa23.08■■□□□ 1.29
SCN1B-206ENST00000638536 GCNAQ96QF7 691 aa23.08■■□□□ 1.29
SCN1B-206ENST00000638536 LRFN3Q9BTN0 628 aa23.08■■□□□ 1.29
SCN1B-206ENST00000638536 C1QTNF1Q9BXJ1 281 aa23.08■■□□□ 1.29
SCN1B-206ENST00000638536 GPR88Q9GZN0 384 aa23.08■■□□□ 1.29
SCN1B-206ENST00000638536 TRPV4Q9HBA0 871 aa23.08■■□□□ 1.29
SCN1B-206ENST00000638536 MYO16Q9Y6X6 1858 aa23.08■■□□□ 1.29
SCN1B-206ENST00000638536 ATP8B3O60423 1300 aa23.08■■□□□ 1.29
SCN1B-206ENST00000638536 ZNF318Q5VUA4 2279 aa23.08■■□□□ 1.28
SCN1B-206ENST00000638536 HHLA1C9JL84 531 aa23.08■■□□□ 1.28
SCN1B-206ENST00000638536 SRFP11831 508 aa23.08■■□□□ 1.28
SCN1B-206ENST00000638536 PRKCSHP14314 528 aaPredicted RBP23.08■■□□□ 1.28
SCN1B-206ENST00000638536 SLC5A3P53794 718 aa23.08■■□□□ 1.28
SCN1B-206ENST00000638536 NCAPHQ15003 741 aa23.08■■□□□ 1.28
SCN1B-206ENST00000638536 VWA3BQ502W6 1294 aa23.08■■□□□ 1.28
SCN1B-206ENST00000638536 TMEM270Q6UE05 265 aa23.08■■□□□ 1.28
SCN1B-206ENST00000638536 NUP93Q8N1F7 819 aa23.08■■□□□ 1.28
SCN1B-206ENST00000638536 JAKMIP2Q96AA8 810 aa23.08■■□□□ 1.28
SCN1B-206ENST00000638536 CEP295NLQ96MC4 621 aa23.08■■□□□ 1.28
SCN1B-206ENST00000638536 CYP2S1Q96SQ9 504 aa23.08■■□□□ 1.28
SCN1B-206ENST00000638536 HSD3B7Q9H2F3 369 aa23.08■■□□□ 1.28
SCN1B-206ENST00000638536 NDST4Q9H3R1 872 aa23.08■■□□□ 1.28
SCN1B-206ENST00000638536 UXTQ9UBK9 157 aaPredicted RBP23.08■■□□□ 1.28
SCN1B-206ENST00000638536 CCL26Q9Y258 94 aa23.08■■□□□ 1.28
SCN1B-206ENST00000638536 C2orf78A6NCI8 922 aa23.07■■□□□ 1.28
SCN1B-206ENST00000638536 PON1P27169 355 aa23.07■■□□□ 1.28
SCN1B-206ENST00000638536 TAF10Q12962 218 aa23.07■■□□□ 1.28
SCN1B-206ENST00000638536 ARHGAP15Q53QZ3 475 aa23.07■■□□□ 1.28
SCN1B-206ENST00000638536 TMEM31Q5JXX7 168 aa23.07■■□□□ 1.28
SCN1B-206ENST00000638536 TTC39CQ8N584 583 aa23.07■■□□□ 1.28
SCN1B-206ENST00000638536 ZSWIM1Q9BR11 485 aa23.07■■□□□ 1.28
SCN1B-206ENST00000638536 UBE2TQ9NPD8 197 aaPredicted RBP23.07■■□□□ 1.28
SCN1B-206ENST00000638536 PCDHB4Q9Y5E5 795 aa23.07■■□□□ 1.28
SCN1B-206ENST00000638536 HEPACAM2A8MVW5 462 aa23.06■■□□□ 1.28
SCN1B-206ENST00000638536 FAM200BP0CF97 657 aa23.06■■□□□ 1.28
SCN1B-206ENST00000638536 PGFP49763 221 aa23.06■■□□□ 1.28
SCN1B-206ENST00000638536 GCNT1Q02742 428 aa23.06■■□□□ 1.28
SCN1B-206ENST00000638536 ANO6Q4KMQ2 910 aa23.06■■□□□ 1.28
SCN1B-206ENST00000638536 DPY19L2P1Q6NXN4 242 aa23.06■■□□□ 1.28
SCN1B-206ENST00000638536 GBP6Q6ZN66 633 aa23.06■■□□□ 1.28
SCN1B-206ENST00000638536 MON1AQ86VX9 555 aa23.06■■□□□ 1.28
SCN1B-206ENST00000638536 CMTM8Q8IZV2 173 aa23.06■■□□□ 1.28
SCN1B-206ENST00000638536 RIN3Q8TB24 985 aa23.06■■□□□ 1.28
SCN1B-206ENST00000638536 TFAP2BQ92481 460 aa23.06■■□□□ 1.28
SCN1B-206ENST00000638536 MRPS31Q92665 395 aaKnown RBP23.06■■□□□ 1.28
SCN1B-206ENST00000638536 FUCA2Q9BTY2 467 aa23.06■■□□□ 1.28
SCN1B-206ENST00000638536 FAM124BQ9H5Z6 455 aaPredicted RBP23.06■■□□□ 1.28
SCN1B-206ENST00000638536 SIX2Q9NPC8 291 aa23.06■■□□□ 1.28
SCN1B-206ENST00000638536 TAB2Q9NYJ8 693 aa23.06■■□□□ 1.28
SCN1B-206ENST00000638536 IL37Q9NZH6 218 aa23.06■■□□□ 1.28
SCN1B-206ENST00000638536 AJAP1Q9UKB5 411 aaPredicted RBP23.06■■□□□ 1.28
SCN1B-206ENST00000638536 TICRRQ7Z2Z1 1910 aa23.06■■□□□ 1.28
SCN1B-206ENST00000638536 KIF26AQ9ULI4 1882 aaPredicted RBP23.05■■□□□ 1.28
SCN1B-206ENST00000638536 KCNMA1Q12791 1236 aa23.05■■□□□ 1.28
SCN1B-206ENST00000638536 EXOC3L4Q17RC7 722 aa23.05■■□□□ 1.28
SCN1B-206ENST00000638536 TTC30AQ86WT1 665 aa23.05■■□□□ 1.28
SCN1B-206ENST00000638536 DUSP16Q9BY84 665 aa23.05■■□□□ 1.28
SCN1B-206ENST00000638536 TRPC7Q9HCX4 862 aa23.05■■□□□ 1.28
SCN1B-206ENST00000638536 CHORDC1Q9UHD1 332 aaPredicted RBP23.05■■□□□ 1.28
SCN1B-206ENST00000638536 GTPBP10A4D1E9 387 aaKnown RBP23.04■■□□□ 1.28
SCN1B-206ENST00000638536 KRBA1A5PL33 1030 aa23.04■■□□□ 1.28
SCN1B-206ENST00000638536 ZNF840PA6NDX5 716 aa23.04■■□□□ 1.28
SCN1B-206ENST00000638536 EEF1GP26641 437 aaKnown RBP23.04■■□□□ 1.28
SCN1B-206ENST00000638536 KRT31Q15323 416 aa23.04■■□□□ 1.28
SCN1B-206ENST00000638536 ARHGAP17Q68EM7 881 aa23.04■■□□□ 1.28
SCN1B-206ENST00000638536 USP13Q92995 863 aaPredicted RBP23.04■■□□□ 1.28
SCN1B-206ENST00000638536 SLC2A4RGQ9NR83 387 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms