RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 MEA1Q16626 185 aa14.77□□□□□ -0.04
GABRB3-219ENST00000636466 NT5DC3Q86UY8 548 aa14.77□□□□□ -0.04
GABRB3-219ENST00000636466 TSEN2Q8NCE0 465 aaKnown RBP14.77□□□□□ -0.04
GABRB3-219ENST00000636466 E2F7Q96AV8 911 aa14.77□□□□□ -0.04
GABRB3-219ENST00000636466 RPRD1AQ96P16 312 aaPredicted RBP14.77□□□□□ -0.04
GABRB3-219ENST00000636466 MUC3BQ9H195 1237 aa14.77□□□□□ -0.04
GABRB3-219ENST00000636466 HES2Q9Y543 173 aa14.77□□□□□ -0.04
GABRB3-219ENST00000636466 C17orf102A2RUQ5 167 aa14.77□□□□□ -0.04
GABRB3-219ENST00000636466 CFAP73A6NFT4 308 aa14.77□□□□□ -0.04
GABRB3-219ENST00000636466 GAS2O43903 313 aaKnown RBP14.77□□□□□ -0.04
GABRB3-219ENST00000636466 PSMD10O75832 226 aa14.77□□□□□ -0.04
GABRB3-219ENST00000636466 JCHAINP01591 159 aa14.77□□□□□ -0.04
GABRB3-219ENST00000636466 MUTP22033 750 aa14.77□□□□□ -0.04
GABRB3-219ENST00000636466 HIC1Q14526 733 aa14.77□□□□□ -0.04
GABRB3-219ENST00000636466 TFB1MQ8WVM0 346 aaKnown RBP14.77□□□□□ -0.04
GABRB3-219ENST00000636466 MANSC1Q9H8J5 431 aa14.77□□□□□ -0.04
GABRB3-219ENST00000636466 IL1RL2Q9HB29 575 aa14.77□□□□□ -0.04
GABRB3-219ENST00000636466 CHST7Q9NS84 486 aa14.77□□□□□ -0.04
GABRB3-219ENST00000636466 TSPAN16Q9UKR8 245 aa14.77□□□□□ -0.04
GABRB3-219ENST00000636466 F8VP50 259 aa14.77□□□□□ -0.05
GABRB3-219ENST00000636466 PSTPIP1O43586 416 aa14.77□□□□□ -0.05
GABRB3-219ENST00000636466 GJB1P08034 283 aa14.77□□□□□ -0.05
GABRB3-219ENST00000636466 TGM2P21980 687 aa14.77□□□□□ -0.05
GABRB3-219ENST00000636466 AVPR1AP37288 418 aa14.77□□□□□ -0.05
GABRB3-219ENST00000636466 PDAP1Q13442 181 aaKnown RBP14.77□□□□□ -0.05
GABRB3-219ENST00000636466 ICA1LQ8NDH6 482 aa14.77□□□□□ -0.05
GABRB3-219ENST00000636466 MROH8Q9H579 483 aa14.77□□□□□ -0.05
GABRB3-219ENST00000636466 WARS2Q9UGM6 360 aaKnown RBP14.77□□□□□ -0.05
GABRB3-219ENST00000636466 ZNF263O14978 683 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 NDUFS3O75489 264 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 SYF2O95926 243 aaKnown RBP14.76□□□□□ -0.05
GABRB3-219ENST00000636466 ZSCAN5DPP0CG00 497 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 ADCYAP1R1P41586 468 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 RPL21P46778 160 aaKnown RBP14.76□□□□□ -0.05
GABRB3-219ENST00000636466 ALDH5A1P51649 535 aaPredicted RBP14.76□□□□□ -0.05
GABRB3-219ENST00000636466 ATN1P54259 1190 aaPredicted RBP14.76□□□□□ -0.05
GABRB3-219ENST00000636466 IFI35P80217 286 aaPredicted RBP14.76□□□□□ -0.05
GABRB3-219ENST00000636466 ATP13A4Q4VNC1 1196 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 ELMOD1Q8N336 334 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.76□□□□□ -0.05
GABRB3-219ENST00000636466 KCNH4Q9UQ05 1017 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 KCNK1O00180 336 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 TSPAN3O60637 253 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 SSTR1P30872 391 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 AP2B1P63010 937 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 ZNF484Q5JVG2 852 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 IRF2BP1Q8IU81 584 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 CELF6Q96J87 481 aaKnown RBP14.76□□□□□ -0.05
GABRB3-219ENST00000636466 CCDC90BQ9GZT6 254 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 CASS4Q9NQ75 786 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 PDHXO00330 501 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 ADCY3O60266 1144 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 MARCKSL1P49006 195 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 PTENP60484 403 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 RBBP7Q16576 425 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 VSIG10LQ86VR7 867 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 AMIGO3Q86WK7 504 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 BLOC1S5Q8TDH9 187 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 CNPY3Q9BT09 278 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 KCTD10Q9H3F6 313 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 GBA2Q9HCG7 927 aaPredicted RBP14.76□□□□□ -0.05
GABRB3-219ENST00000636466 NUDT5Q9UKK9 219 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 AP4E1Q9UPM8 1137 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 ZC3H11AO75152 810 aaKnown RBP eCLIP14.76□□□□□ -0.05
GABRB3-219ENST00000636466 SEC24DO94855 1032 aaPredicted RBP14.76□□□□□ -0.05
GABRB3-219ENST00000636466 ADRB2P07550 413 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 CPT1AP50416 773 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 PLIN5Q00G26 463 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 WDR49Q8IV35 697 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 ADGRF2Q8IZF7 708 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 REPS2Q8NFH8 660 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 MTBPQ96DY7 904 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 HAUS8Q9BT25 410 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 ING2Q9H160 280 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 FAM96AQ9H5X1 160 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 TMBIM4Q9HC24 238 aa14.76□□□□□ -0.05
GABRB3-219ENST00000636466 MT-CO1P00395 513 aa14.75□□□□□ -0.05
GABRB3-219ENST00000636466 SPATA31C1P0DKV0 1188 aa14.75□□□□□ -0.05
GABRB3-219ENST00000636466 RAD51Q06609 339 aa14.75□□□□□ -0.05
GABRB3-219ENST00000636466 SGO1Q5FBB7 561 aa14.75□□□□□ -0.05
GABRB3-219ENST00000636466 PRUNE1Q86TP1 453 aa14.75□□□□□ -0.05
GABRB3-219ENST00000636466 TNFRSF25Q93038 417 aa14.75□□□□□ -0.05
GABRB3-219ENST00000636466 SERPINB12Q96P63 405 aa14.75□□□□□ -0.05
GABRB3-219ENST00000636466 SKAP2O75563 359 aaPredicted RBP14.75□□□□□ -0.05
GABRB3-219ENST00000636466 C15orf52Q6ZUT6 534 aaKnown RBP14.75□□□□□ -0.05
GABRB3-219ENST00000636466 ST13P4Q8IZP2 240 aaPredicted RBP14.75□□□□□ -0.05
GABRB3-219ENST00000636466 EPS8L1Q8TE68 723 aa14.75□□□□□ -0.05
GABRB3-219ENST00000636466 ABTB1Q969K4 478 aaPredicted RBP14.75□□□□□ -0.05
GABRB3-219ENST00000636466 CHST12Q9NRB3 414 aa14.75□□□□□ -0.05
GABRB3-219ENST00000636466 ZNF446Q9NWS9 450 aa14.75□□□□□ -0.05
GABRB3-219ENST00000636466 SLC30A1Q9Y6M5 507 aa14.75□□□□□ -0.05
GABRB3-219ENST00000636466 MYO9BQ13459 2157 aa14.75□□□□□ -0.05
GABRB3-219ENST00000636466 GRIN3BO60391 1043 aa14.75□□□□□ -0.05
GABRB3-219ENST00000636466 MYBL2P10244 700 aa14.75□□□□□ -0.05
GABRB3-219ENST00000636466 UBA1P22314 1058 aaKnown RBP14.75□□□□□ -0.05
GABRB3-219ENST00000636466 ADORA2AP29274 412 aa14.75□□□□□ -0.05
GABRB3-219ENST00000636466 GTF2A2P52657 109 aa14.75□□□□□ -0.05
GABRB3-219ENST00000636466 CYTH1Q15438 398 aa14.75□□□□□ -0.05
GABRB3-219ENST00000636466 SPDYAQ5MJ70 313 aa14.75□□□□□ -0.05
GABRB3-219ENST00000636466 FBXO47Q5MNV8 452 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms