RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 SYT11Q9BT88 431 aa16.34■□□□□ 0.21
CLN8-209ENST00000635970 HSPBP1Q9NZL4 362 aa16.34■□□□□ 0.21
CLN8-209ENST00000635970 PCYOX1Q9UHG3 505 aa16.34■□□□□ 0.21
CLN8-209ENST00000635970 TMEM265A0A087WTH1 108 aa16.33■□□□□ 0.21
CLN8-209ENST00000635970 NT5C1B-RDH14C9J2C7 533 aa16.33■□□□□ 0.21
CLN8-209ENST00000635970 PHF2O75151 1096 aa16.33■□□□□ 0.21
CLN8-209ENST00000635970 CLTAP09496 248 aa16.33■□□□□ 0.21
CLN8-209ENST00000635970 CYP2J2P51589 502 aa16.33■□□□□ 0.21
CLN8-209ENST00000635970 WNT7BP56706 349 aa16.33■□□□□ 0.21
CLN8-209ENST00000635970 C11orf63Q6NUN7 778 aa16.33■□□□□ 0.21
CLN8-209ENST00000635970 ALKAL1Q6UXT8 129 aa16.33■□□□□ 0.21
CLN8-209ENST00000635970 HS2ST1Q7LGA3 356 aa16.33■□□□□ 0.21
CLN8-209ENST00000635970 TMEM173Q86WV6 379 aaPredicted RBP16.33■□□□□ 0.21
CLN8-209ENST00000635970 UBL4BQ8N7F7 174 aa16.33■□□□□ 0.21
CLN8-209ENST00000635970 COLGALT1Q8NBJ5 622 aa16.33■□□□□ 0.21
CLN8-209ENST00000635970 LNX1Q8TBB1 728 aaPredicted RBP16.33■□□□□ 0.21
CLN8-209ENST00000635970 EPB41L4BQ9H329 900 aa16.33■□□□□ 0.21
CLN8-209ENST00000635970 INTS9Q9NV88 658 aaKnown RBP16.33■□□□□ 0.21
CLN8-209ENST00000635970 KIAA0391O15091 583 aaKnown RBP16.33■□□□□ 0.2
CLN8-209ENST00000635970 ATP6V1G2O95670 118 aa16.33■□□□□ 0.2
CLN8-209ENST00000635970 BMPR1AP36894 532 aa16.33■□□□□ 0.2
CLN8-209ENST00000635970 BCAR1P56945 870 aa16.33■□□□□ 0.2
CLN8-209ENST00000635970 SLC8A3P57103 927 aa16.33■□□□□ 0.2
CLN8-209ENST00000635970 GRIK3Q13003 919 aa16.33■□□□□ 0.2
CLN8-209ENST00000635970 TNFAIP8L3Q5GJ75 292 aa16.33■□□□□ 0.2
CLN8-209ENST00000635970 JAMLQ86YT9 394 aa16.33■□□□□ 0.2
CLN8-209ENST00000635970 DEFB123Q8N688 67 aa16.33■□□□□ 0.2
CLN8-209ENST00000635970 CCDC63Q8NA47 563 aa16.33■□□□□ 0.2
CLN8-209ENST00000635970 N4BP2L2Q92802 583 aaPredicted RBP16.33■□□□□ 0.2
CLN8-209ENST00000635970 FAM212AQ96EL1 285 aa16.33■□□□□ 0.2
CLN8-209ENST00000635970 PRDM12Q9H4Q4 367 aa16.33■□□□□ 0.2
CLN8-209ENST00000635970 RPF1Q9H9Y2 349 aaKnown RBP16.33■□□□□ 0.2
CLN8-209ENST00000635970 GOLGA2P5Q9HBQ8 144 aa16.33■□□□□ 0.2
CLN8-209ENST00000635970 CNTN3Q9P232 1028 aa16.33■□□□□ 0.2
CLN8-209ENST00000635970 SUFUQ9UMX1 484 aa16.33■□□□□ 0.2
CLN8-209ENST00000635970 SMIM28A0A1B0GU29 152 aa16.32■□□□□ 0.2
CLN8-209ENST00000635970 LACTBL1A8MY62 500 aa16.32■□□□□ 0.2
CLN8-209ENST00000635970 F8W810 466 aa16.32■□□□□ 0.2
CLN8-209ENST00000635970 CSPG5O95196 566 aa16.32■□□□□ 0.2
CLN8-209ENST00000635970 LAG3P18627 525 aa16.32■□□□□ 0.2
CLN8-209ENST00000635970 PDE6CP51160 858 aa16.32■□□□□ 0.2
CLN8-209ENST00000635970 LMNB2Q03252 620 aa16.32■□□□□ 0.2
CLN8-209ENST00000635970 DSC1Q08554 894 aa16.32■□□□□ 0.2
CLN8-209ENST00000635970 SPRED3Q2MJR0 410 aa16.32■□□□□ 0.2
CLN8-209ENST00000635970 XKR4Q5GH76 650 aa16.32■□□□□ 0.2
CLN8-209ENST00000635970 GPR153Q6NV75 609 aa16.32■□□□□ 0.2
CLN8-209ENST00000635970 KCNT2Q6UVM3 1135 aa16.32■□□□□ 0.2
CLN8-209ENST00000635970 TRPM8Q7Z2W7 1104 aa16.32■□□□□ 0.2
CLN8-209ENST00000635970 COLGALT2Q8IYK4 626 aa16.32■□□□□ 0.2
CLN8-209ENST00000635970 FBXO22Q8NEZ5 403 aa16.32■□□□□ 0.2
CLN8-209ENST00000635970 FAM193BQ96PV7 902 aaPredicted RBP16.32■□□□□ 0.2
CLN8-209ENST00000635970 PPP1R10Q96QC0 940 aaKnown RBP16.32■□□□□ 0.2
CLN8-209ENST00000635970 PAAF1Q9BRP4 392 aa16.32■□□□□ 0.2
CLN8-209ENST00000635970 TRIM51Q9BSJ1 452 aa16.32■□□□□ 0.2
CLN8-209ENST00000635970 BATF3Q9NR55 127 aa16.32■□□□□ 0.2
CLN8-209ENST00000635970 KANSL3Q9P2N6 904 aa16.32■□□□□ 0.2
CLN8-209ENST00000635970 CASTOR2A6NHX0 329 aa16.31■□□□□ 0.2
CLN8-209ENST00000635970 THP07101 528 aa16.31■□□□□ 0.2
CLN8-209ENST00000635970 CHRM1P11229 460 aaPredicted RBP16.31■□□□□ 0.2
CLN8-209ENST00000635970 RARGP13631 454 aa16.31■□□□□ 0.2
CLN8-209ENST00000635970 TNFAIP3P21580 790 aa16.31■□□□□ 0.2
CLN8-209ENST00000635970 ATP5DP30049 168 aa16.31■□□□□ 0.2
CLN8-209ENST00000635970 SLC11A1P49279 550 aa16.31■□□□□ 0.2
CLN8-209ENST00000635970 SOX4Q06945 474 aaPredicted RBP16.31■□□□□ 0.2
CLN8-209ENST00000635970 DCAF12L1Q5VU92 463 aa16.31■□□□□ 0.2
CLN8-209ENST00000635970 CBWD2Q8IUF1 395 aa16.31■□□□□ 0.2
CLN8-209ENST00000635970 FAM186BQ8IYM0 893 aa16.31■□□□□ 0.2
CLN8-209ENST00000635970 GPD1LQ8N335 351 aa16.31■□□□□ 0.2
CLN8-209ENST00000635970 KLHL23Q8NBE8 558 aa16.31■□□□□ 0.2
CLN8-209ENST00000635970 RDH13Q8NBN7 331 aa16.31■□□□□ 0.2
CLN8-209ENST00000635970 MDM1Q8TC05 714 aa16.31■□□□□ 0.2
CLN8-209ENST00000635970 BCL7CQ8WUZ0 217 aaPredicted RBP16.31■□□□□ 0.2
CLN8-209ENST00000635970 RSPH1Q8WYR4 309 aa16.31■□□□□ 0.2
CLN8-209ENST00000635970 C18orf25Q96B23 403 aaPredicted RBP16.31■□□□□ 0.2
CLN8-209ENST00000635970 MIEF2Q96C03 454 aa16.31■□□□□ 0.2
CLN8-209ENST00000635970 ADAM7Q9H2U9 754 aa16.31■□□□□ 0.2
CLN8-209ENST00000635970 NOD2Q9HC29 1040 aa16.31■□□□□ 0.2
CLN8-209ENST00000635970 OSGEPQ9NPF4 335 aa16.31■□□□□ 0.2
CLN8-209ENST00000635970 HOMER3Q9NSC5 361 aa16.31■□□□□ 0.2
CLN8-209ENST00000635970 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.31■□□□□ 0.2
CLN8-209ENST00000635970 EXTL3O43909 919 aa16.31■□□□□ 0.2
CLN8-209ENST00000635970 CTNNA2P26232 953 aa16.31■□□□□ 0.2
CLN8-209ENST00000635970 PLTPP55058 493 aa16.31■□□□□ 0.2
CLN8-209ENST00000635970 ZNF268Q14587 947 aaPredicted RBP16.31■□□□□ 0.2
CLN8-209ENST00000635970 DRAP1Q14919 205 aaPredicted RBP16.31■□□□□ 0.2
CLN8-209ENST00000635970 PPP1R7Q15435 360 aa16.31■□□□□ 0.2
CLN8-209ENST00000635970 KYAT1Q16773 422 aa16.31■□□□□ 0.2
CLN8-209ENST00000635970 HIBCHQ6NVY1 386 aaPredicted RBP16.31■□□□□ 0.2
CLN8-209ENST00000635970 ZDHHC24Q6UX98 284 aa16.31■□□□□ 0.2
CLN8-209ENST00000635970 GLYCTKQ8IVS8 523 aa16.31■□□□□ 0.2
CLN8-209ENST00000635970 RSRC1Q96IZ7 334 aaKnown RBP16.31■□□□□ 0.2
CLN8-209ENST00000635970 FAM84AQ96KN4 292 aa16.31■□□□□ 0.2
CLN8-209ENST00000635970 ZNF558Q96NG5 402 aa16.31■□□□□ 0.2
CLN8-209ENST00000635970 SELENOSQ9BQE4 189 aa16.31■□□□□ 0.2
CLN8-209ENST00000635970 ALG13Q9NP73 1137 aaKnown RBP16.31■□□□□ 0.2
CLN8-209ENST00000635970 RBAKQ9NYW8 714 aaPredicted RBP16.31■□□□□ 0.2
CLN8-209ENST00000635970 TUBGCP4Q9UGJ1 667 aa16.31■□□□□ 0.2
CLN8-209ENST00000635970 DNAJC12Q9UKB3 198 aa16.31■□□□□ 0.2
CLN8-209ENST00000635970 PRG3Q9Y2Y8 225 aaPredicted RBP16.31■□□□□ 0.2
CLN8-209ENST00000635970 RWDD3Q9Y3V2 267 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms