RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 SMAD3P84022 425 aaKnown RBP5.16□□□□□ -1.58
SDCBP-213ENST00000630925 CAP1Q01518 475 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 CHIT1Q13231 466 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 ITGA7Q13683 1181 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 DOC2AQ14183 400 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 TRIM25Q14258 630 aaKnown RBP5.16□□□□□ -1.58
SDCBP-213ENST00000630925 DPYSL2Q16555 572 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 HIF1AQ16665 826 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 FAM98CQ17RN3 349 aaKnown RBP5.16□□□□□ -1.58
SDCBP-213ENST00000630925 HFEQ30201 348 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 SLC35F1Q5T1Q4 408 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 ERMARDQ5T6L9 678 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 KCNT2Q6UVM3 1135 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 LRSAM1Q6UWE0 723 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 ADCK1Q86TW2 530 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 SCN4BQ8IWT1 228 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 MARCH10Q8NA82 808 aaPredicted RBP5.16□□□□□ -1.58
SDCBP-213ENST00000630925 OR8K3Q8NH51 312 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 AFG1LQ8WV93 481 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 CATSPER2Q96P56 530 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 NUDCD1Q96RS6 583 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 MAP7D2Q96T17 732 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 NAP1L3Q99457 506 aaPredicted RBP5.16□□□□□ -1.58
SDCBP-213ENST00000630925 PTPN18Q99952 460 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 GDF15Q99988 308 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 CELF4Q9BZC1 486 aaKnown RBP5.16□□□□□ -1.58
SDCBP-213ENST00000630925 ZDHHC5Q9C0B5 715 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 ST6GALNAC4Q9H4F1 302 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 IGFLR1Q9H665 355 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 IARS2Q9NSE4 1012 aaKnown RBP5.16□□□□□ -1.58
SDCBP-213ENST00000630925 TLK1Q9UKI8 766 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 NOC2LQ9Y3T9 749 aaKnown RBP5.16□□□□□ -1.58
SDCBP-213ENST00000630925 SAMM50Q9Y512 469 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 PCDHGA5Q9Y5G8 931 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 PCDHGA1Q9Y5H4 931 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 NR2E3Q9Y5X4 410 aa5.16□□□□□ -1.58
SDCBP-213ENST00000630925 NUP153P49790 1475 aaKnown RBP5.15□□□□□ -1.58
SDCBP-213ENST00000630925 SCAF11Q99590 1463 aaKnown RBP5.15□□□□□ -1.58
SDCBP-213ENST00000630925 hCG_1809904A0A1W2PP81 198 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 A0A1W2PPE2 198 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 A0A1W2PR64 198 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 FIGNL2A6NMB9 653 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 PSMD14O00487 310 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 SMAD6O43541 496 aaKnown RBP5.15□□□□□ -1.59
SDCBP-213ENST00000630925 TLR2O60603 784 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 FTCDO95954 541 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 EGFRP00533 1210 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 TROVE2P10155 538 aaKnown RBP eCLIP5.15□□□□□ -1.59
SDCBP-213ENST00000630925 TARSP26639 723 aaKnown RBP5.15□□□□□ -1.59
SDCBP-213ENST00000630925 CTSOP43234 321 aaPredicted RBP5.15□□□□□ -1.59
SDCBP-213ENST00000630925 STAT5BP51692 787 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 PLTPP55058 493 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 HDAC4P56524 1084 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 GALNT2Q10471 571 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 TRAF1Q13077 416 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 SLC39A12Q504Y0 691 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 HSP90AA5PQ58FG0 334 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 TOR2AQ5JU69 321 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 FAXCQ5TGI0 409 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 OTOAQ7RTW8 1153 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 OVCH1Q7RTY7 1134 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 KCNK18Q7Z418 384 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 DEFB132Q7Z7B7 95 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 CPLX4Q7Z7G2 160 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 TMEM192Q8IY95 271 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 C17orf53Q8N3J3 647 aaPredicted RBP5.15□□□□□ -1.59
SDCBP-213ENST00000630925 FANCBQ8NB91 859 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 ARRDC4Q8NCT1 418 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 KIF18AQ8NI77 898 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 CYP2W1Q8TAV3 490 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 RHPN1Q8TCX5 695 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 FAM162AQ96A26 154 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 EID2BQ96D98 161 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 ARL5BQ96KC2 179 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 NLRP4Q96MN2 994 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 TTC25Q96NG3 672 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 MPHOSPH9Q99550 1183 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 OSMRQ99650 979 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 ZBED2Q9BTP6 218 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 VCX3BQ9H321 246 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 GORASP2Q9H8Y8 452 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 ZNF287Q9HBT7 754 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 ETAA1Q9NY74 926 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 LIMCH1Q9UPQ0 1083 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 TNFSF13BQ9Y275 285 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 EMC9Q9Y3B6 208 aa5.15□□□□□ -1.59
SDCBP-213ENST00000630925 TRAV6A0A075B6T7 132 aa5.14□□□□□ -1.59
SDCBP-213ENST00000630925 CCDC78A2IDD5 438 aa5.14□□□□□ -1.59
SDCBP-213ENST00000630925 ACOD1A6NK06 481 aa5.14□□□□□ -1.59
SDCBP-213ENST00000630925 GOLGA8CPA6NN73 597 aa5.14□□□□□ -1.59
SDCBP-213ENST00000630925 HNRNPDLO14979 420 aaKnown RBP5.14□□□□□ -1.59
SDCBP-213ENST00000630925 TLL1O43897 1013 aa5.14□□□□□ -1.59
SDCBP-213ENST00000630925 RECQL4O94761 1208 aa5.14□□□□□ -1.59
SDCBP-213ENST00000630925 REC8O95072 547 aa5.14□□□□□ -1.59
SDCBP-213ENST00000630925 C22orf31O95567 290 aa5.14□□□□□ -1.59
SDCBP-213ENST00000630925 METTL18O95568 372 aa5.14□□□□□ -1.59
SDCBP-213ENST00000630925 ESRRAP11474 423 aaPredicted RBP5.14□□□□□ -1.59
SDCBP-213ENST00000630925 CCR1P32246 355 aa5.14□□□□□ -1.59
SDCBP-213ENST00000630925 TAGLN2P37802 199 aaKnown RBP5.14□□□□□ -1.59
SDCBP-213ENST00000630925 GCLCP48506 637 aaPredicted RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms