RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 A0A087WWL8 130 aa4.12□□□□□ -1.75
VBP1-204ENST00000625964 LINC00473A8K010 186 aa4.12□□□□□ -1.75
VBP1-204ENST00000625964 TPP1O14773 563 aa4.12□□□□□ -1.75
VBP1-204ENST00000625964 TBX3O15119 743 aa4.12□□□□□ -1.75
VBP1-204ENST00000625964 URI1O94763 535 aaPredicted RBP4.12□□□□□ -1.75
VBP1-204ENST00000625964 LATS1O95835 1130 aa4.12□□□□□ -1.75
VBP1-204ENST00000625964 BRAFP15056 766 aa4.12□□□□□ -1.75
VBP1-204ENST00000625964 EN2P19622 333 aaPredicted RBP4.12□□□□□ -1.75
VBP1-204ENST00000625964 PPIFP30405 207 aaKnown RBP4.12□□□□□ -1.75
VBP1-204ENST00000625964 KRT17Q04695 432 aa4.12□□□□□ -1.75
VBP1-204ENST00000625964 CTBP1Q13363 440 aa4.12□□□□□ -1.75
VBP1-204ENST00000625964 RAB32Q13637 225 aa4.12□□□□□ -1.75
VBP1-204ENST00000625964 GBX1Q14549 363 aa4.12□□□□□ -1.75
VBP1-204ENST00000625964 KIAA0753Q2KHM9 967 aa4.12□□□□□ -1.75
VBP1-204ENST00000625964 SLC44A4Q53GD3 710 aa4.12□□□□□ -1.75
VBP1-204ENST00000625964 RGS7BPQ6MZT1 257 aaPredicted RBP4.12□□□□□ -1.75
VBP1-204ENST00000625964 SRGAP1Q7Z6B7 1085 aa4.12□□□□□ -1.75
VBP1-204ENST00000625964 FAM109AQ8N4B1 249 aa4.12□□□□□ -1.75
VBP1-204ENST00000625964 LRTOMTQ8WZ04 291 aa4.12□□□□□ -1.75
VBP1-204ENST00000625964 PBKQ96KB5 322 aa4.12□□□□□ -1.75
VBP1-204ENST00000625964 ALG8Q9BVK2 526 aa4.12□□□□□ -1.75
VBP1-204ENST00000625964 MS4A7Q9GZW8 240 aaPredicted RBP4.12□□□□□ -1.75
VBP1-204ENST00000625964 VPS33BQ9H267 617 aa4.12□□□□□ -1.75
VBP1-204ENST00000625964 SERHLQ9NQF3 203 aa4.12□□□□□ -1.75
VBP1-204ENST00000625964 PRDM11Q9NQV5 511 aa4.12□□□□□ -1.75
VBP1-204ENST00000625964 OBP2AQ9NY56 170 aa4.12□□□□□ -1.75
VBP1-204ENST00000625964 EHD3Q9NZN3 535 aa4.12□□□□□ -1.75
VBP1-204ENST00000625964 TPCN1Q9ULQ1 816 aa4.12□□□□□ -1.75
VBP1-204ENST00000625964 ST3GAL5Q9UNP4 418 aa4.12□□□□□ -1.75
VBP1-204ENST00000625964 USP19O94966 1318 aa4.12□□□□□ -1.75
VBP1-204ENST00000625964 WDR27A2RRH5 827 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 TMEM233B4DJY2 109 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 hCG_1984214I3L0E3 225 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 MYO1FO00160 1098 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 PPEF2O14830 753 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 NR2F6P10588 404 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 CYP2C9P11712 490 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 XRCC6P12956 609 aaKnown RBP eCLIP4.11□□□□□ -1.75
VBP1-204ENST00000625964 CCKARP32238 428 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 TFF2Q03403 129 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 FAM153CQ494X1 144 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 MIDNQ504T8 468 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 TEDDM1Q5T9Z0 273 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 RNF220Q5VTB9 566 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 DARS2Q6PI48 645 aaKnown RBP4.11□□□□□ -1.75
VBP1-204ENST00000625964 AMIGO2Q86SJ2 522 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 SMRP1Q8NCR6 262 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 ATRIPQ8WXE1 791 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 RAPGEF4Q8WZA2 1011 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 HMCESQ96FZ2 354 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 SUCLG2Q96I99 432 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 DPH1Q9BZG8 443 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 SACM1LQ9NTJ5 587 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 CPNE7Q9UBL6 633 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 DKK3Q9UBP4 350 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 MRPS17Q9Y2R5 130 aaKnown RBP4.11□□□□□ -1.75
VBP1-204ENST00000625964 GOLIM4O00461 696 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 FRS3O43559 492 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 MGEA5O60502 916 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 NXPH3O95157 252 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 PARNO95453 639 aaKnown RBP4.11□□□□□ -1.75
VBP1-204ENST00000625964 TTLL1O95922 423 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 ZBED1O96006 694 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 EBLN1P0CF75 366 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 ZFXP17010 805 aaPredicted RBP4.11□□□□□ -1.75
VBP1-204ENST00000625964 PEX2P28328 305 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 LRPAP1P30533 357 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 CLCN2P51788 898 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 SUMO3P55854 103 aaPredicted RBP4.11□□□□□ -1.75
VBP1-204ENST00000625964 WNT3P56703 355 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 FAM193AP78312 1265 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 E2F2Q14209 437 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 MGAT5BQ3V5L5 792 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 PLA1AQ53H76 456 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 PLAC9Q5JTB6 97 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 CHST15Q7LFX5 561 aaPredicted RBP4.11□□□□□ -1.75
VBP1-204ENST00000625964 ZNF280BQ86YH2 543 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 MAML1Q92585 1016 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 RFKQ969G6 155 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 TIFAQ96CG3 184 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 ZNF518BQ9C0D4 1074 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 LRRC27Q9C0I9 530 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 SMURF2Q9HAU4 748 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 ZSCAN32Q9NX65 697 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 STK32BQ9NY57 414 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 MTMR4Q9NYA4 1195 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 OGDHLQ9ULD0 1010 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 NDRG4Q9ULP0 352 aaKnown RBP4.11□□□□□ -1.75
VBP1-204ENST00000625964 SSX2IPQ9Y2D8 614 aa4.11□□□□□ -1.75
VBP1-204ENST00000625964 ISM1B1AKI9 464 aa4.1□□□□□ -1.75
VBP1-204ENST00000625964 TLR5O60602 858 aa4.1□□□□□ -1.75
VBP1-204ENST00000625964 MAP4K4O95819 1239 aaPredicted RBP4.1□□□□□ -1.75
VBP1-204ENST00000625964 ELFN1P0C7U0 828 aa4.1□□□□□ -1.75
VBP1-204ENST00000625964 ZKSCAN1P17029 563 aaPredicted RBP4.1□□□□□ -1.75
VBP1-204ENST00000625964 SP2Q02086 613 aa4.1□□□□□ -1.75
VBP1-204ENST00000625964 MYO1EQ12965 1108 aa4.1□□□□□ -1.75
VBP1-204ENST00000625964 POLD3Q15054 466 aaPredicted RBP4.1□□□□□ -1.75
VBP1-204ENST00000625964 CNGA2Q16280 664 aa4.1□□□□□ -1.75
VBP1-204ENST00000625964 ZNF618Q5T7W0 954 aa4.1□□□□□ -1.75
VBP1-204ENST00000625964 DCAF12L1Q5VU92 463 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms